Homologs of Shew_2117 from Shewanella loihica PV-4

ribonuclease activity regulator protein RraA (RefSeq)
SEED: Ribonuclease E inhibitor RraA
KEGG: regulator of ribonuclease activity A

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_2117 ribonuclease activity regulator protein RraA (RefSeq) no data 100 100
o Shewanella sp. ANA-3 Shewana3_2373 ribonuclease activity regulator protein RraA (RefSeq) strong 66 100
o Shewanella oneidensis MR-1 SO2567 menG-1 S-adenosylmethionine:2-demethylmenaquinone methyltransferase (NCBI ptt file) insig. 63 99
o Shewanella amazonensis SB2B Sama_1888 ribonuclease activity regulator protein RraA (RefSeq) sig. 64 98
  Pseudomonas sp. S08-1 OH686_01650 Ribonuclease E inhibitor RraA strong 55 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_11990 ribonuclease activity regulator protein RraA insig. 52 98
  Pseudomonas simiae WCS417 PS417_21010 ribonuclease activity regulator protein RraA strong 53 97
  Pseudomonas aeruginosa PA14 IKLFDK_08565 ribonuclease E activity regulator RraA sig. 50 99
  Pseudomonas aeruginosa PUPa3 DQ20_RS54630 rraA;go_function=ribonuclease ribonuclease E activity regulator RraA strong 50 99
  Pseudomonas fluorescens SBW25 PFLU_RS22620 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase strong 53 97
  Pseudomonas fluorescens SBW25-INTG PFLU_RS22620 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase strong 53 97
  Pseudomonas orientalis W4I3 QF045_RS22835 ribonuclease E activity regulator RraA insig. 53 97
  Pseudomonas fluorescens FW300-N2E3 AO353_00850 ribonuclease activity regulator protein RraA sig. 52 97
  Pseudomonas stutzeri RCH2 Psest_2315 RraA famliy insig. 52 99
  Pseudomonas aeruginosa MRSN321 DY961_RS20550 rraA;go_function=ribonuclease ribonuclease E activity regulator RraA insig. 49 99
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04347 Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase cofit 52 97
  Pseudomonas fluorescens FW300-N2C3 AO356_02815 ribonuclease activity regulator protein RraA sig. 51 97
  Pseudomonas sp. DMC3 GFF5238 Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase cofit 53 97
  Pseudomonas segetis P6 ACVTMO_RS13005 rraA ribonuclease E activity regulator RraA insig. 51 99
  Pseudomonas sp. RS175 PFR28_01040 Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase strong 52 97
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2387 Ribonuclease E inhibitor RraA sig. 50 97
  Pseudomonas putida KT2440 PP_2084 Putative regulator of ribonuclease activity sig. 52 96
  Pseudomonas sp. BP01 JOY50_RS22160 rraA ribonuclease E activity regulator RraA insig. 52 96
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3828 Ribonuclease E inhibitor RraA strong 49 97
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4110 Ribonuclease E inhibitor RraA strong 50 97
  Marinobacter adhaerens HP15 HP15_2228 ribonuclease activity regulator protein RraA strong 50 95
  Pseudomonas sp. SVBP6 COO64_RS05370 rraA ribonuclease E activity regulator RraA insig. 49 99
  Pseudomonas syringae pv. syringae B728a Psyr_2092 Protein of unknown function 1935 sig. 48 99
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2092 Protein of unknown function 1935 insig. 48 99
  Acinetobacter radioresistens SK82 MPMX26_01316 Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase insig. 48 92
o Azospirillum sp. SherDot2 MPMX19_04842 Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase insig. 50 92
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1848.1 Ribonuclease E inhibitor RraA insig. 48 98
  Acinetobacter baumannii LAC-4 RR41_RS12280 ribonuclease E activity regulator RraA no data 49 92
o Azospirillum brasilense Sp245 AZOBR_RS17130 ribonuclease no data 48 95
o Ralstonia solanacearum PSI07 RPSI07_RS17355 ribonuclease E inhibitor RraA insig. 44 96
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS00130 ribonuclease insig. 45 93
o Ralstonia solanacearum UW163 UW163_RS13460 ribonuclease insig. 45 93
o Acidovorax sp. GW101-3H11 Ac3H11_2834 Ribonuclease E inhibitor RraA insig. 46 93
o Lysobacter sp. OAE881 ABIE51_RS04140 ribonuclease E activity regulator RraA no data 44 93
  Shewanella amazonensis SB2B Sama_3200 ribonuclease activity regulator protein RraA (RefSeq) strong 43 94
  Shewanella sp. ANA-3 Shewana3_3723 ribonuclease activity regulator protein RraA (RefSeq) sig. 42 94
  Shewanella oneidensis MR-1 SO4197 menG-2 S-adenosylmethionine:2-demethylmenaquinone methyltransferase (NCBI ptt file) strong 42 94
o Ralstonia solanacearum GMI1000 RS_RS06790 ribonuclease E inhibitor RraA insig. 47 93
o Cupriavidus basilensis FW507-4G11 RR42_RS12215 ribonuclease insig. 43 97
  Alteromonas macleodii MIT1002 MIT1002_00164 Regulator of ribonuclease activity A cofit 42 94
  Shewanella loihica PV-4 Shew_3370 ribonuclease activity regulator protein RraA (RefSeq) no data 42 94
o Burkholderia phytofirmans PsJN BPHYT_RS12315 ribonuclease no data 43 97
  Dechlorosoma suillum PS Dsui_0010 RraA family protein cofit 42 96
  Herbaspirillum seropedicae SmR1 HSERO_RS10555 ribonuclease insig. 44 93
  Escherichia coli BL21 ECD_03814 ribonuclease E (RNase E) inhibitor protein insig. 43 95
  Escherichia fergusonii Becca EFB2_04689 Regulator of ribonuclease activity A insig. 43 95
  Escherichia coli ECOR27 NOLOHH_05895 rraA ribonuclease E activity regulator RraA insig. 43 95
  Escherichia coli ECOR38 HEPCGN_12395 rraA ribonuclease E activity regulator RraA sig. 43 95
  Escherichia coli ECRC100 OKFHMN_13750 rraA ribonuclease E activity regulator RraA cofit 43 95
  Escherichia coli ECRC101 MCAODC_04250 rraA ribonuclease E activity regulator RraA insig. 43 95
  Escherichia coli ECRC102 NIAGMN_11505 rraA ribonuclease E activity regulator RraA cofit 43 95
  Escherichia coli ECRC62 BNILDI_05635 rraA ribonuclease E activity regulator RraA insig. 43 95
  Escherichia coli ECRC98 JDDGAC_17375 rraA ribonuclease E activity regulator RraA insig. 43 95
  Escherichia coli ECRC99 KEDOAH_14410 rraA ribonuclease E activity regulator RraA no data 43 95
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04122 Regulator of ribonuclease activity A insig. 43 95
  Escherichia coli Nissle 1917 ECOLIN_RS22625 ribonuclease E activity regulator RraA insig. 43 95
  Escherichia coli BW25113 b3929 rraA ribonuclease activity regulator protein RraA (NCBI) strong 43 95
  Serratia liquefaciens MT49 IAI46_24585 ribonuclease E activity regulator RraA cofit 41 95
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_12975 rraA ribonuclease E activity regulator RraA insig. 42 95
  Erwinia tracheiphila SCR3 LU632_RS19685 rraA ribonuclease E activity regulator RraA insig. 42 95
  Enterobacter sp. TBS_079 MPMX20_04540 Regulator of ribonuclease activity A insig. 43 95
o Ralstonia sp. UNC404CL21Col ABZR87_RS11580 ribonuclease E activity regulator RraA insig. 42 95
  Paraburkholderia sabiae LMG 24235 QEN71_RS06240 ribonuclease E activity regulator RraA insig. 42 96
  Pectobacterium carotovorum WPP14 HER17_RS00840 ribonuclease E activity regulator RraA insig. 41 95
  Vibrio cholerae E7946 ATCC 55056 CSW01_13500 ribonuclease E activity regulator RraA insig. 40 92
  Enterobacter asburiae PDN3 EX28DRAFT_4402 regulator of ribonuclease activity A insig. 43 95
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2311 Ribonuclease E inhibitor RraA strong 42 95
  Rahnella sp. WP5 EX31_RS14255 ribonuclease E activity regulator RraA insig. 41 95
  Klebsiella michiganensis M5al BWI76_RS00740 ribonuclease E activity regulator RraA sig. 41 95
  Mycobacterium tuberculosis H37Rv Rv3853 Regulator of RNase E activity a RraA sig. 42 90
  Klebsiella pneumoniae MKP103 KDGMDA_09250 ribonuclease E activity regulator RraA insig. 40 95
  Dickeya dianthicola ME23 DZA65_RS21515 ribonuclease E activity regulator RraA insig. 41 95
  Dickeya dadantii 3937 DDA3937_RS00905 ribonuclease E activity regulator RraA insig. 41 95
  Variovorax sp. SCN45 GFF4367 KEGG: regulator of ribonuclease activity A no data 45 82
  Dickeya dianthicola 67-19 HGI48_RS20470 ribonuclease E activity regulator RraA insig. 41 95
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS18500 ribonuclease E activity regulator RraA cofit 42 95
  Pantoea sp. MT58 IAI47_00840 ribonuclease E activity regulator RraA insig. 41 95
  Erwinia amylovora T8 OLJFJH_06055 ribonuclease E activity regulator RraA sig. 41 95
  Pseudomonas sp. BP01 JOY50_RS05170 RraA family protein no data 35 86
  Paraburkholderia graminis OAS925 ABIE53_006318 RraA family protein insig. 31 83
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06356 RraA famliy insig. 32 78
  Pseudomonas fluorescens SBW25 PFLU_RS21075 RraA family protein insig. 36 79
  Pseudomonas fluorescens SBW25-INTG PFLU_RS21075 RraA family protein insig. 36 79
  Sphingobium sp. HT1-2 GFF2871 4-carboxy-4-hydroxy-2-oxoadipate aldolase (EC 4.1.3.17) insig. 32 83
  Klebsiella michiganensis M5al BWI76_RS26545 dimethylmenaquinone methyltransferase insig. 34 77
  Pseudomonas fluorescens SBW25 PFLU_RS11340 RraA family protein insig. 33 76
  Pseudomonas fluorescens SBW25-INTG PFLU_RS11340 RraA family protein insig. 33 76
  Burkholderia phytofirmans PsJN BPHYT_RS30330 hypothetical protein no data 33 78
  Pseudomonas simiae WCS417 PS417_19020 dimethylmenaquinone methyltransferase sig. 33 79
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2963 Dimethylmenaquinone methyltransferase family protein insig. 32 83
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05962 RraA famliy insig. 37 73
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01710 Regulator of ribonuclease activity A cofit 28 76
  Dickeya dianthicola 67-19 HGI48_RS07585 RraA family protein no data 37 75
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0524 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase insig. 34 85
  Pseudomonas segetis P6 ACVTMO_RS20280 RraA family protein insig. 34 73