Homologs of Shew_0251 from Shewanella loihica PV-4

phage integrase family protein (RefSeq)
SEED: Phage integrase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_0251 phage integrase family protein (RefSeq) insig. 100 100
o Dinoroseobacter shibae DFL-12 Dshi_2590 integrase family protein (RefSeq) insig. 51 97
o Marinobacter adhaerens HP15 HP15_4164 phage integrase family protein insig. 48 97
o Lysobacter sp. OAE881 ABIE51_RS03485 tyrosine-type recombinase/integrase insig. 49 96
o Pseudomonas stutzeri RCH2 Psest_3423 Site-specific recombinase XerC insig. 47 98
o Rhodopseudomonas palustris CGA009 TX73_006840 tyrosine-type recombinase/integrase insig. 45 98
o Klebsiella michiganensis M5al BWI76_RS13030 site-specific recombinase, phage integrase family protein insig. 48 95
o Pseudomonas sp. BP01 JOY50_RS12925 tyrosine-type recombinase/integrase insig. 47 98
o Pseudomonas putida KT2440 PP_3791 Site-specific recombinase, phage integrase family insig. 47 98
  Alteromonas macleodii MIT1002 MIT1002_02610 site-specific tyrosine recombinase XerC insig. 50 93
o Alteromonas macleodii MIT1002 MIT1002_02605 site-specific tyrosine recombinase XerC insig. 49 94
o Pseudomonas aeruginosa PUPa3 DQ20_RS38195 tyrosine-type recombinase/integrase insig. 46 98
o Pseudomonas orientalis W4I3 QF045_RS20340 tyrosine-type recombinase/integrase insig. 46 98
o Escherichia coli Nissle 1917 ECOLIN_RS01460 site-specific integrase insig. 48 95
o Bosea sp. OAE506 ABIE41_RS06940 tyrosine-type recombinase/integrase insig. 45 97
o Phaeobacter inhibens DSM 17395 PGA1_c19380 putative phage integrase insig. 46 99
o Caulobacter crescentus NA1000 CCNA_01844 DNA integration/recombination/inversion protein sig. 43 99
o Caulobacter crescentus NA1000 Δfur CCNA_01844 DNA integration/recombination/inversion protein cofit 43 99
o Magnetospirillum magneticum AMB-1 AMB_RS18475 integrase insig. 43 99
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS03410 tyrosine-type recombinase/integrase insig. 43 99
o Sphingobium sp. HT1-2 GFF5357 Phage integrase insig. 43 97
  Sphingobium sp. HT1-2 GFF5340 Phage integrase cofit 42 97
  Alteromonas macleodii MIT1002 MIT1002_00614 site-specific tyrosine recombinase XerC no data 50 52
  Alteromonas macleodii MIT1002 MIT1002_02616 site-specific tyrosine recombinase XerC no data 50 52
  Sinorhizobium meliloti 1021 SMa1874 hypothetical protein insig. 42 57
  Bosea sp. OAE506 ABIE41_RS19005 integrase no data 40 43
  Sphingobium sp. HT1-2 GFF5358 Phage integrase cofit 62 24
  Paraburkholderia graminis OAS925 ABIE53_000988 hypothetical protein sig. 56 28
  Phaeobacter inhibens DSM 17395 PGA1_c14060 tyrosine recombinase XerD strong 29 83
  Escherichia coli ECRC62 BNILDI_14315 Tyrosine-type recombinase/integrase cofit 31 69
  Paraburkholderia sabiae LMG 24235 QEN71_RS44370 site-specific integrase insig. 27 87
  Shewanella sp. ANA-3 Shewana3_1799 phage integrase family protein (RefSeq) insig. 29 73
  Shewanella oneidensis MR-1 SO1448 site-specific recombinase, phage integrase family (NCBI ptt file) insig. 29 73
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5461 Tyrosine recombinase XerD insig. 29 75
  Rhodanobacter denitrificans MT42 LRK55_RS04515 site-specific tyrosine recombinase XerD strong 28 78
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS04735 site-specific tyrosine recombinase XerD insig. 28 78
  Bosea sp. OAE506 ABIE41_RS00515 tyrosine-type recombinase/integrase insig. 29 76
  Rhodanobacter sp. FW510-T8 OKGIIK_11520 xerD site-specific tyrosine recombinase XerD sig. 27 78
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS05285 site-specific tyrosine recombinase XerD insig. 26 78
  Klebsiella pneumoniae MKP103 KDGMDA_04300 site-specific tyrosine recombinase XerD sig. 27 76
  Sinorhizobium meliloti 1021 SMc00691 site-specific tyrosine recombinase XerD sig. 26 89
  Vibrio cholerae E7946 ATCC 55056 CSW01_12250 site-specific tyrosine recombinase XerD strong 28 76
  Klebsiella michiganensis M5al BWI76_RS23815 site-specific tyrosine recombinase XerD no data 27 76
  Enterobacter asburiae PDN3 EX28DRAFT_2945 tyrosine recombinase XerD insig. 27 81
  Erwinia amylovora T8 OLJFJH_08835 site-specific tyrosine recombinase XerD strong 27 81
  Pantoea sp. MT58 IAI47_03820 site-specific tyrosine recombinase XerD strong 27 76
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS15880 site-specific tyrosine recombinase XerD cofit 27 76
  Serratia liquefaciens MT49 IAI46_20730 site-specific tyrosine recombinase XerD insig. 28 76
  Bacteroides stercoris CC31F HMPREF1181_RS01250 site-specific tyrosine recombinase XerD insig. 26 92
  Enterobacter sp. TBS_079 MPMX20_03753 Tyrosine recombinase XerD strong 26 81
  Dinoroseobacter shibae DFL-12 Dshi_1611 integrase family protein (RefSeq) strong 24 74
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS19225 site-specific tyrosine recombinase XerD strong 27 83
  Shewanella loihica PV-4 Shew_1254 phage integrase family protein (RefSeq) insig. 29 73
  Rahnella sp. WP5 EX31_RS13480 site-specific tyrosine recombinase XerD strong 27 76
  Dinoroseobacter shibae DFL-12 Dshi_3629 integrase family protein (RefSeq) no data 26 76
  Dinoroseobacter shibae DFL-12 Dshi_3661 integrase family protein (RefSeq) no data 26 76
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05745 site-specific integrase insig. 25 87
  Rhizobium sp. OAE497 ABIE40_RS17685 site-specific tyrosine recombinase XerD sig. 28 78
  Xanthobacter sp. DMC5 GFF3081 Tyrosine recombinase XerD no data 36 43
  Dickeya dianthicola 67-19 HGI48_RS03440 site-specific tyrosine recombinase XerD insig. 28 76
  Dickeya dianthicola ME23 DZA65_RS03485 site-specific tyrosine recombinase XerD no data 28 76
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4441.1 Tyrosine recombinase XerD sig. 26 73
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1244 Site-specific recombinase XerD no data 27 85
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1749 Site-specific recombinase XerD no data 27 85
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1789 Site-specific recombinase XerD no data 27 85
  Dickeya dadantii 3937 DDA3937_RS03300 site-specific tyrosine recombinase XerD insig. 28 76
  Escherichia fergusonii Becca EFB2_03726 ISKra4 family transposase ISCep1 insig. 27 72
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03368 ISKra4 family transposase ISCep1 insig. 27 72
  Escherichia coli Nissle 1917 ECOLIN_RS02040 tyrosine-type DNA invertase IpbA no data 27 72
  Burkholderia phytofirmans PsJN BPHYT_RS05275 integrase no data 26 81
  Burkholderia phytofirmans PsJN BPHYT_RS32945 integrase no data 26 81
  Escherichia coli BL21 ECD_02726 site-specific tyrosine recombinase strong 26 76
  Escherichia fergusonii Becca EFB2_01007 Tyrosine recombinase XerD strong 26 76
  Escherichia coli ECOR27 NOLOHH_11495 xerD site-specific tyrosine recombinase XerD insig. 26 76
  Escherichia coli ECOR38 HEPCGN_18860 xerD site-specific tyrosine recombinase XerD strong 26 76
  Escherichia coli ECRC100 OKFHMN_19570 xerD site-specific tyrosine recombinase XerD no data 26 76
  Escherichia coli ECRC101 MCAODC_10090 xerD site-specific tyrosine recombinase XerD no data 26 76
  Escherichia coli ECRC62 BNILDI_10025 xerD site-specific tyrosine recombinase XerD insig. 26 76
  Escherichia coli ECRC98 JDDGAC_23210 xerD site-specific tyrosine recombinase XerD no data 26 76
  Escherichia coli ECRC99 KEDOAH_08570 xerD site-specific tyrosine recombinase XerD no data 26 76
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00821 Tyrosine recombinase XerD sig. 26 76
  Escherichia coli Nissle 1917 ECOLIN_RS16125 site-specific tyrosine recombinase XerD strong 26 76
  Escherichia coli BW25113 b2894 xerD site-specific tyrosine recombinase XerD (NCBI) strong 26 76
  Sphingobium sp. HT1-2 GFF2416 Site-specific tyrosine recombinase XerD strong 26 82
  Paraburkholderia sabiae LMG 24235 QEN71_RS42770 site-specific integrase insig. 25 74
  Herbaspirillum seropedicae SmR1 HSERO_RS04265 tyrosine recombinase XerD insig. 28 76
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2991 Tyrosine recombinase XerD cofit 26 76
  Pectobacterium carotovorum WPP14 HER17_RS17890 site-specific tyrosine recombinase XerD strong 27 76
  Paraburkholderia graminis OAS925 ABIE53_001488 site-specific recombinase XerD sig. 26 81
  Paraburkholderia sabiae LMG 24235 QEN71_RS42900 site-specific integrase no data 25 87
  Azospirillum sp. SherDot2 MPMX19_06434 Tyrosine recombinase XerD insig. 28 84
  Bacteroides ovatus ATCC 8483 BACOVA_04169 phage integrase SAM-like domain protein insig. 26 93
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_03195 xerD site-specific tyrosine recombinase XerD no data 25 76
  Agrobacterium fabrum C58 Atu3629 site-specific tyrosine recombinase XerD no data 35 43
  Shewanella loihica PV-4 Shew_0770 tyrosine recombinase XerD (RefSeq) strong 29 74
  Bacteroides ovatus ATCC 8483 BACOVA_02123 tyrosine recombinase XerD strong 27 92
  Magnetospirillum magneticum AMB-1 AMB_RS04775 integrase insig. 26 79
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS12210 tyrosine recombinase XerC insig. 24 76
  Escherichia coli ECRC102 NIAGMN_17335 xerD site-specific tyrosine recombinase XerD no data 26 76
  Bosea sp. OAE506 ABIE41_RS19630 tyrosine-type recombinase/integrase insig. 39 35