Homologs of Dshi_3229 from Dinoroseobacter shibae DFL-12

MiaB-like tRNA modifying enzyme (RefSeq)
SEED: tRNA-t(6)A37 methylthiotransferase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Dinoroseobacter shibae DFL-12 Dshi_3229 MiaB-like tRNA modifying enzyme (RefSeq) sig. 100 100
o Phaeobacter inhibens DSM 17395 PGA1_c33960 MiaB-like tRNA modifying enzyme strong 80 100
o Azospirillum sp. SherDot2 MPMX19_00599 Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB no data 65 98
o Caulobacter crescentus NA1000 CCNA_03798 tRNA 2-methylthioadenosine synthase-like protein no data 64 98
o Caulobacter crescentus NA1000 Δfur CCNA_03798 tRNA 2-methylthioadenosine synthase-like protein no data 64 98
o Azospirillum brasilense Sp245 AZOBR_RS14165 2-methylthioadenine synthase no data 65 99
o Rhodopseudomonas palustris CGA009 TX73_001305 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB insig. 63 100
o Rhodospirillum rubrum S1H Rru_A1182 MiaB-like tRNA modifying enzyme (NCBI) no data 60 99
o Sinorhizobium meliloti 1021 SMc03855 hypothetical protein strong 62 100
o Agrobacterium fabrum C58 Atu2694 hypothetical protein insig. 60 100
o Sphingobium sp. HT1-2 GFF317 tRNA t(6)A37-methylthiotransferase (EC 2.8.4.5) cofit 60 99
o Magnetospirillum magneticum AMB-1 AMB_RS01090 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB no data 59 99
o Rhizobium sp. OAE497 ABIE40_RS18320 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB insig. 59 100
o Bosea sp. OAE506 ABIE41_RS11695 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB insig. 58 95
o Xanthobacter sp. DMC5 GFF1768 Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB insig. 58 98
o Sphingomonas koreensis DSMZ 15582 Ga0059261_4154 MiaB-like tRNA modifying enzyme sig. 53 94
o Fusobacterium nucleatum SB010 HUW76_04185 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB strong 32 98
o Desulfovibrio vulgaris Miyazaki F DvMF_1402 RNA modification enzyme, MiaB family (RefSeq) insig. 40 90
o Kangiella aquimarina DSM 16071 B158DRAFT_2271 MiaB-like tRNA modifying enzyme cofit 35 97
o Desulfovibrio vulgaris Hildenborough JW710 DVU0897 RNA modification enzyme, MiaB-family (TIGR) sig. 38 85
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_05370 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB sig. 34 94
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS04300 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB insig. 34 89
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1604 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB insig. 35 96
o Cellulophaga baltica 18 M666_RS18185 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB sig. 32 92
o Bacteroides stercoris CC31F HMPREF1181_RS08710 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB sig. 33 96
  Sphingobium sp. HT1-2 GFF3937 tRNA-i(6)A37 methylthiotransferase (EC 2.8.4.3) cofit 35 91
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS07615 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB strong 32 97
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS06200 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB strong 32 94
o Bacteroides ovatus ATCC 8483 BACOVA_03193 tRNA methylthiotransferase YqeV strong 33 96
o Bacteroides thetaiotaomicron VPI-5482 BT2153 putative Fe-S oxidoreductases (NCBI ptt file) strong 32 96
o Phocaeicola dorei CL03T12C01 ABI39_RS00040 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB strong 31 97
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS14720 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 34 99
  Phaeobacter inhibens DSM 17395 PGA1_c04710 (dimethylallyl)adenosine tRNA methylthiotransferase MiaB sig. 32 100
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS10685 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB strong 32 94
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2356 MiaB-like tRNA modifying enzyme strong 29 95
  Xanthobacter sp. DMC5 GFF3719 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase sig. 33 98
  Ralstonia sp. UNC404CL21Col ABZR87_RS07780 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 33 96
  Azospirillum sp. SherDot2 MPMX19_02511 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase insig. 33 100
  Agrobacterium fabrum C58 Atu0356 miaB protein sig. 32 98
  Bosea sp. OAE506 ABIE41_RS04495 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 34 92
  Synechococcus elongatus PCC 7942 Synpcc7942_2374 tRNA-i(6)A37 thiotransferase enzyme MiaB strong 33 98
  Sinorhizobium meliloti 1021 SMc01115 (dimethylallyl)adenosine tRNA methylthiotransferase insig. 33 96
  Caulobacter crescentus NA1000 CCNA_00054 tRNA 2-methylthioadenosine synthase strong 33 89
  Caulobacter crescentus NA1000 Δfur CCNA_00054 tRNA 2-methylthioadenosine synthase cofit 33 89
  Dinoroseobacter shibae DFL-12 Dshi_1019 RNA modification enzyme, MiaB family (RefSeq) insig. 33 96
  Synechocystis sp000284455 PCC 6803 SGL_RS04845 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 31 90
  Castellaniella sp019104865 MT123 ABCV34_RS15345 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB cofit 34 96
  Rhizobium sp. OAE497 ABIE40_RS01705 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 33 98
  Rhodopseudomonas palustris CGA009 TX73_002325 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 34 92
  Ralstonia solanacearum GMI1000 RS_RS02645 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 32 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS02195 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 33 96
  Azospirillum brasilense Sp245 AZOBR_RS01475 (dimethylallyl)adenosine tRNA methylthiotransferase insig. 35 79
  Alteromonas macleodii MIT1002 MIT1002_01480 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB insig. 31 98
  Magnetospirillum magneticum AMB-1 AMB_RS22585 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase insig. 33 98
  Ralstonia solanacearum PSI07 RPSI07_RS21380 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 32 96
  Acinetobacter baumannii LAC-4 RR41_RS02450 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB cofit 30 89
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04239 tRNA-i(6)A37 thiotransferase enzyme MiaB insig. 33 96
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF613 tRNA-i(6)A37 methylthiotransferase cofit 31 96
  Pseudomonas sp. SVBP6 COO64_RS15510 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 33 96
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS11825 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB cofit 32 96
  Ralstonia solanacearum UW163 UW163_RS01760 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 32 96
  Acinetobacter radioresistens SK82 MPMX26_02667 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase cofit 30 89
  Bifidobacterium breve UCC2003 BBR_RS16570 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 30 89
  Burkholderia phytofirmans PsJN BPHYT_RS16535 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase sig. 32 96
  Pseudomonas fluorescens SBW25 PFLU_RS26555 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 33 96
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26555 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB sig. 33 96
  Pseudomonas simiae WCS417 PS417_24625 (dimethylallyl)adenosine tRNA methylthiotransferase sig. 33 96
  Shewanella amazonensis SB2B Sama_2575 tRNA-i(6)A37 modification enzyme MiaB (RefSeq) strong 29 97
  Pseudomonas syringae pv. syringae B728a Psyr_4345 tRNA-i(6)A37 thiotransferase enzyme MiaB sig. 33 96
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4345 tRNA-i(6)A37 thiotransferase enzyme MiaB insig. 33 96
  Variovorax sp. OAS795 ABID97_RS06475 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 31 96
  Variovorax sp. SCN45 GFF7320 tRNA-i(6)A37 methylthiotransferase (EC 2.8.4.3) insig. 30 96
  Shewanella sp. ANA-3 Shewana3_1008 tRNA-i(6)A37 thiotransferase enzyme MiaB (RefSeq) strong 29 98
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05078 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase cofit 33 96
  Pseudomonas fluorescens FW300-N2E3 AO353_06375 (dimethylallyl)adenosine tRNA methylthiotransferase sig. 33 96
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4579 tRNA-i(6)A37 methylthiotransferase strong 30 98
  Pseudomonas sp. DMC3 GFF3900 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase insig. 33 96
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1380 tRNA-i(6)A37 methylthiotransferase insig. 33 96
  Cupriavidus basilensis FW507-4G11 RR42_RS02855 dimethylallyladenosine tRNA methylthiotransferase insig. 31 96
  Escherichia fergusonii Becca EFB2_03438 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase insig. 30 98
  Escherichia coli ECRC62 BNILDI_21610 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB cofit 30 98
  Escherichia coli BL21 ECD_00629 tRNA-i(6)A37 methylthiotransferase strong 30 98
  Escherichia coli ECOR27 NOLOHH_23605 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 30 98
  Escherichia coli ECOR38 HEPCGN_01005 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 30 98
  Escherichia coli ECRC100 OKFHMN_07225 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 30 98
  Escherichia coli ECRC101 MCAODC_26440 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 30 98
  Escherichia coli ECRC102 NIAGMN_05280 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB cofit 30 98
  Escherichia coli ECRC98 JDDGAC_10870 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 30 98
  Escherichia coli ECRC99 KEDOAH_20745 miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB no data 30 98
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03051 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase cofit 30 98
  Escherichia coli BW25113 b0661 miaB isopentenyl-adenosine A37 tRNA methylthiolase (NCBI) sig. 30 98
  Herbaspirillum seropedicae SmR1 HSERO_RS03615 (dimethylallyl)adenosine tRNA methylthiotransferase insig. 32 96
  Pseudomonas stutzeri RCH2 Psest_0532 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB sig. 32 96
  Pseudomonas sp. RS175 PFR28_03848 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase insig. 34 87
  Escherichia coli Nissle 1917 ECOLIN_RS03555 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB no data 30 98
  Shewanella oneidensis MR-1 SO1181 miaB tRNA-i(6)A37 modification enzyme MiaB (NCBI ptt file) strong 29 98
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2712 tRNA-i(6)A37 methylthiotransferase sig. 33 96
  Marinobacter adhaerens HP15 HP15_2466 tRNA-i(6)A37 thiotransferase enzyme MiaB strong 30 96
  Pseudomonas sp. S08-1 OH686_09215 tRNA-i(6)A37 thiotransferase enzyme MiaB insig. 31 96
  Acidovorax sp. GW101-3H11 Ac3H11_4008 tRNA-i(6)A37 methylthiotransferase insig. 30 96