Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU3187 | hup-4 | DNA-binding protein HU (TIGR) | sig. | 100 | 100 |
o | Desulfovibrio vulgaris Miyazaki F | DvMF_2029 | | histone family protein DNA-binding protein (RefSeq) | no data | 83 | 99 |
| Pseudomonas sp. RS175 | PFR28_03533 | | DNA-binding protein HU 1 | insig. | 48 | 98 |
| Pseudomonas putida KT2440 | PP_0975 | | putative DNA-binding protein HU, form N | no data | 46 | 98 |
| Azospirillum brasilense Sp245 | AZOBR_RS23140 | | transcriptional regulator | no data | 46 | 99 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_1709 | | DNA-binding protein HU-beta | no data | 44 | 98 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_904 | | DNA-binding protein HU-beta | strong | 44 | 98 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_04560 | | dipicolinate synthase | no data | 44 | 98 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_17445 | | dipicolinate synthase | no data | 44 | 98 |
| Pseudomonas simiae WCS417 | PS417_05140 | | dipicolinate synthase | strong | 44 | 98 |
o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5415 | | DNA-binding protein HU-beta | no data | 45 | 98 |
| Variovorax sp. OAS795 | ABID97_RS23580 | | HU family DNA-binding protein | no data | 45 | 98 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_2799 | | histone family protein DNA-binding protein (RefSeq) | strong | 45 | 98 |
| Azospirillum brasilense Sp245 | AZOBR_RS33080 | | transcriptional regulator | no data | 45 | 98 |
o | Pseudomonas fluorescens SBW25 | PFLU_RS05210 | | HU family DNA-binding protein | insig. | 45 | 98 |
o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS05210 | | HU family DNA-binding protein | strong | 45 | 98 |
| Magnetospirillum magneticum AMB-1 | AMB_RS04760 | | HU family DNA-binding protein | no data | 44 | 99 |
| Magnetospirillum magneticum AMB-1 | AMB_RS05070 | | HU family DNA-binding protein | no data | 44 | 99 |
| Magnetospirillum magneticum AMB-1 | AMB_RS10490 | | HU family DNA-binding protein | no data | 44 | 99 |
| Magnetospirillum magneticum AMB-1 | AMB_RS11020 | | HU family DNA-binding protein | insig. | 44 | 99 |
| Shewanella loihica PV-4 | Shew_0430 | | histone family protein DNA-binding protein (RefSeq) | sig. | 42 | 98 |
| Pseudomonas syringae pv. syringae B728a | Psyr_1084 | | Histone-like bacterial DNA-binding protein | no data | 42 | 98 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1084 | | Histone-like bacterial DNA-binding protein | insig. | 42 | 98 |
| Pseudomonas sp. S08-1 | OH686_02500 | | DNA-binding protein HU, form N | insig. | 43 | 98 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU0764 | hup-2 | DNA-binding protein HU (TIGR) | sig. | 43 | 98 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS29495 | | HU family DNA-binding protein | strong | 45 | 87 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS00650 | | HU family DNA-binding protein | no data | 43 | 99 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS05030 | | HU family DNA-binding protein | no data | 43 | 99 |
| Ralstonia solanacearum GMI1000 | RS_RS12640 | | HU family DNA-binding protein | no data | 43 | 99 |
| Ralstonia solanacearum PSI07 | RPSI07_RS12265 | | HU family DNA-binding protein | no data | 43 | 99 |
| Ralstonia solanacearum UW163 | UW163_RS08595 | | HU family DNA-binding protein | no data | 43 | 99 |
| Azospirillum brasilense Sp245 | AZOBR_RS07150 | | transcriptional regulator | no data | 45 | 97 |
| Burkholderia phytofirmans PsJN | BPHYT_RS19580 | | DNA-binding protein | no data | 44 | 87 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02359 | | HU family DNA-binding protein | no data | 44 | 87 |
| Paraburkholderia graminis OAS925 | ABIE53_000292 | | DNA-binding protein HU-beta | no data | 44 | 87 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS35320 | | HU family DNA-binding protein | insig. | 42 | 98 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS41130 | | HU family DNA-binding protein | insig. | 41 | 98 |
| Pantoea sp. MT58 | IAI47_14640 | | DNA-binding protein HU-beta | sig. | 49 | 78 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS36300 | | HU family DNA-binding protein | insig. | 42 | 98 |
| Fusobacterium nucleatum SB010 | HUW76_07000 | | HU family DNA-binding protein | no data | 39 | 98 |
| Shewanella amazonensis SB2B | Sama_1227 | | HU family DNA-binding protein (RefSeq) | no data | 46 | 78 |
| Erwinia tracheiphila SCR3 | LU632_RS18330 | hupB | DNA-binding protein HU-beta | insig. | 49 | 78 |
| Shewanella sp. ANA-3 | Shewana3_2658 | | histone family protein DNA-binding protein (RefSeq) | no data | 47 | 78 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS35095 | | HU family DNA-binding protein | insig. | 40 | 98 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_06148 | | DNA-binding protein HU-beta | no data | 45 | 79 |
| Azospirillum sp. SherDot2 | MPMX19_01544 | | DNA-binding protein HU | no data | 47 | 78 |
| Kangiella aquimarina DSM 16071 | B158DRAFT_1039 | | Bacterial nucleoid DNA-binding protein | strong | 47 | 78 |
| Shewanella oneidensis MR-1 | SO1797 | | DNA-binding protein, HU family (NCBI ptt file) | no data | 46 | 78 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS41730 | | HU family DNA-binding protein | no data | 45 | 79 |
| Rhodospirillum rubrum S1H | Rru_A0292 | | Integration host factor, beta subunit (NCBI) | no data | 37 | 99 |
| Shewanella loihica PV-4 | Shew_2505 | | histone family protein DNA-binding protein (RefSeq) | no data | 45 | 78 |
| Marinobacter adhaerens HP15 | HP15_2182 | | histone-like bacterial DNA-binding protein | no data | 42 | 97 |
| Rhodospirillum rubrum S1H | Rru_A1553 | | Histone-like DNA-binding protein (NCBI) | no data | 42 | 98 |
| Phaeobacter inhibens DSM 17395 | PGA1_c34260 | | DNA-binding protein HU-beta | no data | 41 | 99 |
| Magnetospirillum magneticum AMB-1 | AMB_RS10215 | | HU family DNA-binding protein | no data | 45 | 79 |
| Variovorax sp. SCN45 | GFF1732 | | DNA-binding protein HU-beta | no data | 42 | 98 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS01615 | | DNA-binding protein | no data | 41 | 87 |
| Lysobacter sp. OAE881 | ABIE51_RS14140 | | HU family DNA-binding protein | no data | 41 | 98 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU1134 | hupB | DNA-binding protein HU, beta subunit (TIGR) | insig. | 38 | 97 |
| Escherichia coli BL21 | ECD_00392 | | HU, DNA-binding transcriptional regulator, beta subunit | strong | 47 | 78 |
| Escherichia fergusonii Becca | EFB2_03617 | | DNA-binding protein HU-beta | insig. | 47 | 78 |
| Escherichia coli ECOR27 | NOLOHH_01250 | hupB | DNA-binding protein HU-beta | cofit | 47 | 78 |
| Escherichia coli ECOR38 | HEPCGN_06930 | hupB | DNA-binding protein HU-beta | cofit | 47 | 78 |
| Escherichia coli ECRC101 | OKFHMN_08315 | hupB | DNA-binding protein HU-beta | insig. | 47 | 78 |
| Escherichia coli ECRC101 | MCAODC_27540 | hupB | DNA-binding protein HU-beta | insig. | 47 | 78 |
| Escherichia coli ECRC102 | NIAGMN_06370 | hupB | DNA-binding protein HU-beta | insig. | 47 | 78 |
| Escherichia coli ECRC62 | BNILDI_22665 | hupB | DNA-binding protein HU-beta | insig. | 47 | 78 |
| Escherichia coli ECRC98 | JDDGAC_11970 | hupB | DNA-binding protein HU-beta | no data | 47 | 78 |
| Escherichia coli ECRC99 | KEDOAH_19650 | hupB | DNA-binding protein HU-beta | no data | 47 | 78 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03233 | | DNA-binding protein HU-beta | strong | 47 | 78 |
| Escherichia coli Nissle 1917 | ECOLIN_RS02640 | | nucleoid-associated protein HU-beta | insig. | 47 | 78 |
| Escherichia coli BW25113 | b0440 | hupB | HU, DNA-binding transcriptional regulator, beta subunit (NCBI) | strong | 47 | 78 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4356 | | DNA-binding protein HU-beta | cofit | 47 | 78 |
| Phaeobacter inhibens DSM 17395 | PGA1_c04840 | | integration host factor subunit beta | no data | 33 | 99 |
| Alteromonas macleodii MIT1002 | MIT1002_02756 | | hypothetical protein | no data | 46 | 78 |
| Dickeya dadantii 3937 | DDA3937_RS05655 | | DNA-binding protein HU-beta | insig. | 46 | 78 |
| Dickeya dianthicola 67-19 | HGI48_RS05700 | | DNA-binding protein HU-beta | insig. | 46 | 78 |
| Dickeya dianthicola ME23 | DZA65_RS06025 | | DNA-binding protein HU-beta | insig. | 46 | 78 |
| Dinoroseobacter shibae DFL-12 | Dshi_1027 | | integration host factor, beta subunit (RefSeq) | no data | 33 | 99 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS28955 | | transcriptional regulator | sig. | 55 | 58 |
| Enterobacter asburiae PDN3 | EX28DRAFT_2530 | | Bacterial nucleoid DNA-binding protein | cofit | 47 | 78 |
| Enterobacter sp. TBS_079 | MPMX20_01031 | | DNA-binding protein HU-beta | strong | 47 | 78 |
| Klebsiella michiganensis M5al | BWI76_RS06540 | | DNA-binding protein HU-beta | strong | 47 | 78 |
| Serratia liquefaciens MT49 | IAI46_05025 | | DNA-binding protein HU-beta | insig. | 46 | 78 |
| Caulobacter crescentus NA1000 | CCNA_02416 | | DNA-binding protein HU | strong | 45 | 79 |
| Caulobacter crescentus NA1000 Δfur | CCNA_02416 | | DNA-binding protein HU | cofit | 45 | 79 |
| Pectobacterium carotovorum WPP14 | HER17_RS15835 | | DNA-binding protein HU-beta | insig. | 45 | 78 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS11630 | | HU family DNA-binding protein | cofit | 40 | 97 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS06620 | | HU family DNA-binding protein | strong | 45 | 77 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS10500 | | HU family DNA-binding protein | strong | 45 | 77 |
| Magnetospirillum magneticum AMB-1 | AMB_RS14030 | | HU family DNA-binding protein | no data | 46 | 78 |
| Sinorhizobium meliloti 1021 | SMc01906 | | histone-like protein | no data | 39 | 98 |
| Shewanella sp. ANA-3 | Shewana3_0547 | | histone family protein DNA-binding protein (RefSeq) | cofit | 38 | 98 |
| Shewanella oneidensis MR-1 | SO0548 | | DNA-binding protein, HU family (NCBI ptt file) | insig. | 38 | 98 |
| Rahnella sp. WP5 | EX31_RS22260 | | DNA-binding protein HU-beta | insig. | 45 | 79 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_0500 | | histone family protein DNA-binding protein (RefSeq) | insig. | 45 | 77 |
| Ralstonia solanacearum GMI1000 | RS_RS16830 | | HU family DNA-binding protein | insig. | 37 | 98 |
| Marinobacter adhaerens HP15 | HP15_1367 | | integration host factor, beta subunit | no data | 33 | 98 |
| Shewanella amazonensis SB2B | Sama_3158 | | histone-like DNA-binding protein (RefSeq) | insig. | 38 | 98 |
| Bacteroides thetaiotaomicron VPI-5482 | BT2830 | | DNA-binding protein HU-beta (NCBI ptt file) | strong | 40 | 88 |