| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| o | Escherichia coli Nissle 1917 | ECOLIN_RS23830 | | transcriptional regulator MelR | insig. | 100 | 100 |
| o | Escherichia coli BL21 | ECD_03989 | | melibiose operon transcriptional regulator; autoregulator | insig. | 100 | 100 |
| o | Escherichia fergusonii Becca | EFB2_04464 | | Melibiose operon regulatory protein | insig. | 100 | 100 |
| o | Escherichia coli ECOR27 | NOLOHH_04810 | melR | transcriptional regulator MelR | insig. | 100 | 100 |
| o | Escherichia coli ECOR38 | HEPCGN_11180 | melR | transcriptional regulator MelR | insig. | 100 | 100 |
| o | Escherichia coli ECRC62 | BNILDI_06680 | melR | transcriptional regulator MelR | cofit | 100 | 100 |
| o | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03926 | | Melibiose operon regulatory protein | insig. | 100 | 100 |
| | Escherichia coli BW25113 | b4118 | melR | DNA-binding transcriptional dual regulator (NCBI) | insig. | 100 | 100 |
| o | Escherichia coli ECRC100 | OKFHMN_12545 | melR | transcriptional regulator MelR | cofit | 100 | 100 |
| o | Escherichia coli ECRC101 | MCAODC_03055 | melR | transcriptional regulator MelR | insig. | 100 | 100 |
| o | Escherichia coli ECRC102 | NIAGMN_10390 | melR | transcriptional regulator MelR | cofit | 100 | 100 |
| o | Escherichia coli ECRC98 | JDDGAC_16180 | melR | transcriptional regulator MelR | insig. | 100 | 100 |
| o | Escherichia coli ECRC99 | KEDOAH_15620 | melR | transcriptional regulator MelR | no data | 100 | 100 |
| o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1474 | | Melibiose operon regulatory protein | insig. | 89 | 98 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_10695 | | transcriptional regulator MelR | insig. | 87 | 97 |
| o | Klebsiella pneumoniae MRSN742743 | GJGHJB_04635 | melR | transcriptional regulator MelR | insig. | 87 | 97 |
| o | Shewanella loihica PV-4 | Shew_2295 | | AraC family transcriptional regulator (RefSeq) | insig. | 33 | 91 |
| | Agrobacterium fabrum C58 | Atu3152 | | AraC family transcriptional regulator | strong | 28 | 85 |
| | Rhizobium sp. OAE497 | ABIE40_RS22695 | | helix-turn-helix domain-containing protein | strong | 27 | 85 |
| | Klebsiella michiganensis M5al | BWI76_RS11895 | | AraC family transcriptional regulator | sig. | 31 | 40 |
| | Enterobacter sp. TBS_079 | MPMX20_02241 | | HTH-type transcriptional activator RhaS | sig. | 35 | 33 |
| | Azospirillum sp. SherDot2 | MPMX19_02871 | | HTH-type transcriptional activator RhaR | insig. | 32 | 31 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_4417 | | Helix-turn-helix domain | insig. | 37 | 31 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4851 | | Transcriptional regulator of various polyols utilization, AraC family | sig. | 30 | 34 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT3609 | | transcriptional regulator (NCBI ptt file) | insig. | 24 | 73 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_811 | | Transcriptional regulator of various polyols utilization, AraC family | insig. | 27 | 39 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS13410 | | AraC family transcriptional regulator | strong | 29 | 34 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS13410 | | AraC family transcriptional regulator | strong | 29 | 34 |
| | Rahnella sp. WP5 | EX31_RS10900 | | helix-turn-helix domain-containing protein | insig. | 26 | 83 |
| | Acinetobacter baumannii LAC-4 | RR41_RS12805 | | AraC family transcriptional regulator | insig. | 32 | 37 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3044 | | Transcriptional regulator of various polyols utilization, AraC family | strong | 30 | 34 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_27665 | | AraC family transcriptional regulator | strong | 27 | 40 |
| | Pseudomonas simiae WCS417 | PS417_12725 | | AraC family transcriptional regulator | strong | 29 | 34 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02793 | | HTH-type transcriptional activator RhaS | cofit | 29 | 34 |
| | Pseudomonas sp. RS175 | PFR28_01716 | | HTH-type transcriptional activator RhaS | strong | 27 | 39 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS09050 | | helix-turn-helix domain-containing protein | insig. | 32 | 32 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_2441 | | transcriptional regulator, AraC family | insig. | 27 | 41 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2441 | | transcriptional regulator, AraC family | insig. | 27 | 41 |
| | Pseudomonas segetis P6 | ACVTMO_RS09310 | argR | transcriptional regulator ArgR | cofit | 31 | 36 |
| | Pseudomonas sp. S08-1 | OH686_21280 | | Arginine pathway regulatory protein ArgR, repressor of arg regulon | strong | 31 | 36 |
| | Pseudomonas sp. DMC3 | GFF4881 | | HTH-type transcriptional regulator CdhR | cofit | 30 | 36 |
| | Pseudomonas simiae WCS417 | PS417_21720 | | AraC family transcriptional regulator | no data | 30 | 36 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1968 | | Arginine pathway regulatory protein ArgR, repressor of arg regulon | strong | 30 | 36 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3437 | | Arginine pathway regulatory protein ArgR, repressor of arg regulon | strong | 30 | 36 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_03035 | | AraC family transcriptional regulator | strong | 30 | 36 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_18720 | | AraC family transcriptional regulator | strong | 30 | 36 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5664 | | Arginine pathway regulatory protein ArgR, repressor of arg regulon | strong | 30 | 36 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS23455 | | AraC family transcriptional regulator | insig. | 32 | 49 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS23325 | | GlxA family transcriptional regulator | strong | 30 | 36 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS23325 | | GlxA family transcriptional regulator | strong | 30 | 36 |
| | Pseudomonas sp. BP01 | JOY50_RS00985 | argR | transcriptional regulator ArgR | cofit | 30 | 36 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04486 | | HTH-type transcriptional regulator CdhR | cofit | 30 | 36 |
| | Pseudomonas protegens RBAN4 | FABNJH_23325 | argR | transcriptional regulator ArgR | insig. | 30 | 36 |
| | Pseudomonas sp. RS175 | PFR28_03284 | | HTH-type transcriptional regulator CdhR | strong | 30 | 36 |
| | Pseudomonas sp. SVBP6 | COO64_RS21620 | argR | transcriptional regulator ArgR | insig. | 30 | 36 |
| | Pseudomonas orientalis W4I3 | QF045_RS23825 | | transcriptional regulator ArgR | insig. | 30 | 36 |
| | Pseudomonas putida KT2440 | PP_4482 | | Transcriptional regulator, AraC family | strong | 30 | 36 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3566 | | transcriptional regulator, AraC family | insig. | 30 | 36 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3566 | | transcriptional regulator, AraC family | insig. | 30 | 36 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_2183 | | ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) | insig. | 29 | 44 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_23885 | | AraC family transcriptional regulator | strong | 28 | 34 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4608 | | L-rhamnose operon transcriptional activator RhaR | insig. | 29 | 32 |
| | Pseudomonas orientalis W4I3 | QF045_RS17170 | | AraC family transcriptional regulator | insig. | 26 | 41 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_01620 | | AraC family transcriptional regulator | insig. | 32 | 33 |
| | Pseudomonas protegens RBAN4 | FABNJH_16670 | mltR | Transcriptional activator MltR | insig. | 27 | 36 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.2124.1 | | hypothetical protein | insig. | 33 | 45 |
| | Pseudomonas aeruginosa MRSN321 | PFGADD_04238 | argR | transcriptional regulator ArgR | strong | 30 | 35 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_03975 | | transcriptional regulator ArgR | strong | 30 | 35 |
| | Pseudomonas aeruginosa PUPa3 | NPBIFN_04297 | argR | transcriptional regulator ArgR | strong | 30 | 35 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS13625 | | hypothetical protein | insig. | 29 | 38 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4230 | | transcriptional activator FtrA | insig. | 32 | 35 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS12260 | | hypothetical protein | insig. | 23 | 90 |
| | Pseudomonas sp. RS175 | PFR28_04569 | | HTH-type transcriptional regulator CdhR | strong | 29 | 39 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS18340 | | helix-turn-helix domain-containing protein | insig. | 31 | 33 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS20015 | | helix-turn-helix transcriptional regulator | insig. | 30 | 36 |
| | Pseudomonas sp. RS175 | PFR28_01504 | | HTH-type transcriptional activator RhaR | insig. | 30 | 33 |
| | Enterobacter sp. TBS_079 | MPMX20_02552 | | HTH-type transcriptional activator RhaR | insig. | 27 | 59 |
| | Pseudomonas segetis P6 | ACVTMO_RS02370 | | GlxA family transcriptional regulator | insig. | 32 | 32 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS06070 | | helix-turn-helix domain-containing protein | insig. | 24 | 52 |
| | Enterobacter sp. TBS_079 | MPMX20_04525 | | HTH-type transcriptional activator RhaR | insig. | 33 | 31 |
| | Pseudomonas sp. BP01 | JOY50_RS24810 | ada | bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada | insig. | 33 | 36 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_26250 | | AraC family transcriptional regulator | insig. | 28 | 33 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1125 | | Transcriptional regulator, AraC family | insig. | 27 | 33 |
| | Pseudomonas sp. DMC3 | GFF2894 | | HTH-type transcriptional activator RhaS | insig. | 26 | 34 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1007 | | Transcriptional regulator, AraC family | insig. | 32 | 32 |
| | Pseudomonas putida KT2440 | PP_0706 | | fused O(6)-alkylguanine DNA alkyltransferase - transcriptional activator | insig. | 32 | 36 |
| | Pseudomonas segetis P6 | ACVTMO_RS01735 | | AraC family transcriptional regulator | insig. | 29 | 34 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_03406 | | transcriptional regulator, AraC family | insig. | 27 | 42 |
| | Pseudomonas sp. SVBP6 | COO64_RS22095 | ada | bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada | insig. | 31 | 41 |
| | Variovorax sp. OAS795 | ABID97_RS20685 | | AraC family transcriptional regulator | insig. | 21 | 84 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS06080 | | response regulator transcription factor | insig. | 31 | 31 |
| | Klebsiella michiganensis M5al | BWI76_RS10640 | | AraC family transcriptional regulator | insig. | 29 | 35 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37540 | | AraC family transcriptional regulator | cofit | 24 | 36 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4651 | | Transcriptional regulator, AraC family | insig. | 36 | 30 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS29955 | | AraC family transcriptional regulator | insig. | 30 | 32 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4948 | | Transcriptional regulator, AraC family | sig. | 30 | 32 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS21295 | | hypothetical protein | strong | 29 | 31 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS02635 | | AraC family transcriptional regulator | insig. | 30 | 47 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_27015 | | 6-O-methylguanine DNA methyltransferase | insig. | 31 | 42 |
| | Paraburkholderia graminis OAS925 | ABIE53_004405 | | AraC-like DNA-binding protein | strong | 32 | 36 |
| | Escherichia coli ECOR27 | NOLOHH_01945 | glxA | AraC family transcriptional regulator | insig. | 32 | 32 |
| | Escherichia coli ECRC62 | BNILDI_00070 | glxA | AraC family transcriptional regulator | insig. | 32 | 32 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03381 | | Right origin-binding protein | insig. | 32 | 32 |
| | Dickeya dianthicola ME23 | DZA65_RS08735 | | helix-turn-helix domain-containing protein | insig. | 31 | 33 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02999 | | transcriptional regulator, AraC family | insig. | 30 | 32 |
| | Variovorax sp. SCN45 | GFF1929 | | Transcriptional regulator, AraC family | insig. | 27 | 38 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_436 | | ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) | insig. | 38 | 31 |
| | Paraburkholderia graminis OAS925 | ABIE53_002253 | | AraC family transcriptional regulator | insig. | 32 | 28 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS10510 | | AraC family transcriptional regulator | no data | 26 | 33 |
| | Escherichia coli BL21 | ECD_00257 | | putative DNA-binding transcriptional regulator | insig. | 32 | 32 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04151 | | transcriptional regulator, AraC family | no data | 31 | 34 |
| | Paraburkholderia graminis OAS925 | ABIE53_003388 | | AraC-like DNA-binding protein | insig. | 31 | 34 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS16070 | | AraC family transcriptional regulator | insig. | 29 | 41 |
| | Pseudomonas stutzeri RCH2 | Psest_2061 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 29 | 33 |
| | Cellulophaga baltica 18 | M666_RS09325 | | AraC family transcriptional regulator | insig. | 23 | 32 |
| | Rhodospirillum rubrum S1H | Rru_A0251 | | Transcriptional Regulator, AraC family (NCBI) | cofit | 33 | 32 |
| | Escherichia fergusonii Becca | EFB2_04660 | | HTH-type transcriptional activator RhaS | insig. | 31 | 31 |
| | Escherichia coli ECOR27 | NOLOHH_05750 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | insig. | 31 | 31 |
| | Escherichia coli ECOR38 | HEPCGN_12250 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | insig. | 31 | 31 |
| | Escherichia coli BW25113 | b3954 | yijO | predicted DNA-binding transcriptional regulator (NCBI) | insig. | 31 | 31 |
| | Escherichia coli BL21 | ECD_03839 | | AraC family putative transcriptional activator | insig. | 31 | 31 |
| | Escherichia coli ECRC100 | OKFHMN_13605 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | cofit | 31 | 31 |
| | Escherichia coli ECRC101 | MCAODC_04105 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | insig. | 31 | 31 |
| | Escherichia coli ECRC102 | NIAGMN_11355 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | cofit | 31 | 31 |
| | Escherichia coli ECRC62 | BNILDI_05775 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | cofit | 31 | 31 |
| | Escherichia coli ECRC98 | JDDGAC_17230 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | insig. | 31 | 31 |
| | Escherichia coli ECRC99 | KEDOAH_14555 | yijO | Uncharacterized HTH-type transcriptional regulator YijO | no data | 31 | 31 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_04096 | | HTH-type transcriptional activator RhaS | insig. | 31 | 31 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS22825 | | AraC family transcriptional regulator | insig. | 31 | 31 |
| | Dickeya dianthicola 67-19 | HGI48_RS08140 | | helix-turn-helix domain-containing protein | cofit | 31 | 33 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_19900 | | AraC family transcriptional regulator | insig. | 29 | 46 |
| | Klebsiella pneumoniae MRSN742743 | GJGHJB_02831 | xynB | AraC family transcriptional regulator | insig. | 29 | 46 |
| | Rhodopseudomonas palustris CGA009 | TX73_001770 | | bifunctional helix-turn-helix domain-containing protein/methylated-DNA--[protein]-cysteine S-methyltransferase | insig. | 29 | 32 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_2573 | | AraC-type DNA-binding domain-containing proteins | cofit | 19 | 87 |
| | Pseudomonas aeruginosa MRSN321 | PFGADD_03866 | | HTH araC/xylS-type domain-containing protein | sig. | 34 | 33 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_05970 | | AraC family transcriptional regulator | insig. | 34 | 33 |
| | Pseudomonas aeruginosa PUPa3 | NPBIFN_03914 | | HTH araC/xylS-type domain-containing protein | strong | 34 | 33 |
| | Pantoea sp. MT58 | IAI47_05640 | | helix-turn-helix transcriptional regulator | insig. | 31 | 34 |
| | Escherichia fergusonii Becca | EFB2_03739 | | Right origin-binding protein | insig. | 31 | 32 |
| | Escherichia coli ECOR38 | HEPCGN_07655 | glxA | AraC family transcriptional regulator | insig. | 31 | 32 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS01970 | | helix-turn-helix domain-containing protein | no data | 31 | 32 |
| | Rhodospirillum rubrum S1H | Rru_A0919 | | Two Component Transcriptional Regulator, AraC family (NCBI) | insig. | 27 | 34 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS04235 | | hypothetical protein | insig. | 26 | 33 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2755 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 26 | 36 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_247 | | Transcriptional regulator, AraC family | insig. | 32 | 32 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS18095 | | GlxA family transcriptional regulator | insig. | 32 | 30 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS18095 | | GlxA family transcriptional regulator | sig. | 32 | 30 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02631 | | HTH-type transcriptional regulator CdhR | cofit | 32 | 30 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1041 | | transcriptional regulator, AraC family | insig. | 30 | 36 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1041 | | transcriptional regulator, AraC family | insig. | 30 | 36 |
| | Sinorhizobium meliloti 1021 | SM_b21559 | | AraC family transcriptional regulator | insig. | 29 | 33 |
| | Pseudomonas sp. DMC3 | GFF2807 | | HTH-type transcriptional activator RhaS | insig. | 28 | 31 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS11140 | | hypothetical protein | insig. | 23 | 86 |
| | Xanthobacter sp. DMC5 | GFF3380 | | HTH-type transcriptional activator RhaR | insig. | 32 | 31 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS00165 | | AraC family transcriptional regulator | insig. | 31 | 34 |
| | Klebsiella michiganensis M5al | BWI76_RS13355 | | AraC family transcriptional regulator | insig. | 28 | 31 |
| | Marinobacter adhaerens HP15 | HP15_3152 | | regulatory protein ada | insig. | 28 | 37 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03396 | | AraC-type DNA-binding protein | insig. | 27 | 32 |
| | Agrobacterium fabrum C58 | Atu4297 | | AraC family transcriptional regulator | strong | 21 | 86 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS03625 | | response regulator | insig. | 30 | 35 |
| | Pseudomonas sp. BP01 | JOY50_RS05035 | | GlxA family transcriptional regulator | no data | 29 | 46 |
| | Dickeya dadantii 3937 | DDA3937_RS07320 | | helix-turn-helix domain-containing protein | insig. | 31 | 33 |
| | Pseudomonas sp. RS175 | PFR28_02656 | | HTH-type transcriptional regulator CdhR | strong | 31 | 32 |
| | Rhodopseudomonas palustris CGA009 | TX73_006805 | | AraC family transcriptional regulator | insig. | 30 | 33 |
| | Rahnella sp. WP5 | EX31_RS14690 | | helix-turn-helix transcriptional regulator | insig. | 29 | 31 |
| | Escherichia coli ECOR38 | HEPCGN_10855 | araC | AraC-type DNA-binding domain and AraC-containing proteins | strong | 32 | 33 |
| | Escherichia coli ECRC62 | BNILDI_09390 | araC | AraC-type DNA-binding domain and AraC-containing proteins | cofit | 32 | 33 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS17720 | | AraC family transcriptional regulator | insig. | 32 | 31 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS17720 | | AraC family transcriptional regulator | insig. | 32 | 31 |
| | Escherichia coli ECRC100 | OKFHMN_09130 | glxA | AraC family transcriptional regulator | cofit | 31 | 32 |
| | Escherichia coli ECRC101 | MCAODC_28355 | glxA | AraC family transcriptional regulator | insig. | 31 | 32 |
| | Escherichia coli ECRC102 | NIAGMN_07195 | glxA | AraC family transcriptional regulator | insig. | 31 | 32 |
| | Escherichia coli ECRC98 | JDDGAC_12780 | glxA | AraC family transcriptional regulator | insig. | 31 | 32 |
| | Escherichia coli ECRC99 | KEDOAH_18835 | glxA | AraC family transcriptional regulator | no data | 31 | 32 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS09480 | | AraC family transcriptional regulator | insig. | 21 | 82 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2340 | | Transcriptional regulator, AraC family | insig. | 30 | 31 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5024 | | ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) | insig. | 35 | 28 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_1225 | | Helix-turn-helix domain | insig. | 34 | 34 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS03490 | | response regulator transcription factor | insig. | 32 | 28 |
| | Paraburkholderia graminis OAS925 | ABIE53_004081 | | AraC-like DNA-binding protein | insig. | 30 | 38 |
| | Rhizobium sp. OAE497 | ABIE40_RS21380 | | AraC family transcriptional regulator | strong | 29 | 36 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00041 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 27 | 32 |
| | Alteromonas macleodii MIT1002 | MIT1002_02553 | | Carnitine catabolism transcriptional activator | insig. | 26 | 34 |
| | Paraburkholderia graminis OAS925 | ABIE53_000371 | | AraC-like DNA-binding protein | insig. | 34 | 30 |
| | Rhodopseudomonas palustris CGA009 | TX73_005540 | | AraC family transcriptional regulator | insig. | 30 | 31 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_21920 | | AraC family transcriptional regulator | insig. | 29 | 32 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS01580 | | AraC family transcriptional regulator | insig. | 28 | 38 |
| | Marinobacter adhaerens HP15 | HP15_1056 | | transcriptional regulator, AraC family protein | cofit | 30 | 42 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS19325 | | AraC family transcriptional regulator | insig. | 35 | 37 |
| | Paraburkholderia graminis OAS925 | ABIE53_005062 | | AraC family transcriptional regulator | sig. | 28 | 32 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS11130 | | GlxA family transcriptional regulator | insig. | 25 | 36 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS11130 | | GlxA family transcriptional regulator | insig. | 25 | 36 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04003 | | HTH-type transcriptional regulator CdhR | insig. | 24 | 38 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01105 | | transcriptional regulator, AraC family | insig. | 31 | 28 |
| | Pseudomonas orientalis W4I3 | QF045_RS13855 | | GlxA family transcriptional regulator | insig. | 30 | 30 |
| | Sinorhizobium meliloti 1021 | SMa0319 | | AraC family transcriptional regulator | insig. | 25 | 33 |
| | Enterobacter sp. TBS_079 | MPMX20_03173 | | Bifunctional transcriptional activator/DNA repair enzyme Ada | insig. | 36 | 29 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS14505 | | bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada | insig. | 35 | 29 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS14505 | | bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada | sig. | 35 | 29 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02291 | | AraC-type DNA-binding protein | insig. | 34 | 30 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_09345 | | AraC family transcriptional regulator | insig. | 31 | 29 |
| | Klebsiella michiganensis M5al | BWI76_RS00825 | | AraC family transcriptional regulator | insig. | 31 | 34 |
| | Variovorax sp. OAS795 | ABID97_RS27630 | | AraC family transcriptional regulator | insig. | 30 | 34 |
| | Lysobacter sp. OAE881 | ABIE51_RS03340 | | AraC family transcriptional regulator | insig. | 30 | 32 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS04410 | | helix-turn-helix transcriptional regulator | insig. | 28 | 28 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS12335 | | helix-turn-helix transcriptional regulator | cofit | 28 | 28 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5308 | | Transcriptional regulator, AraC family | strong | 28 | 32 |
| | Paraburkholderia graminis OAS925 | ABIE53_002581 | | transcriptional regulator GlxA family with amidase domain | insig. | 26 | 31 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS08395 | | AraC family transcriptional regulator | insig. | 22 | 91 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_09205 | | HTH-type transcriptional activator RhaR | insig. | 37 | 22 |
| | Klebsiella pneumoniae MRSN742743 | GJGHJB_04925 | rhaR | HTH-type transcriptional activator RhaR | insig. | 37 | 22 |
| | Agrobacterium fabrum C58 | Atu0248 | | transcriptional regulator, AraC family | insig. | 31 | 29 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS20465 | | AraC family transcriptional regulator | insig. | 31 | 37 |
| | Sinorhizobium meliloti 1021 | SM_b21336 | | AraC family transcriptional regulator | insig. | 29 | 32 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_250 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 28 | 30 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_06800 | | AraC family transcriptional regulator | insig. | 27 | 34 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS25940 | | AraC family transcriptional regulator | insig. | 27 | 47 |
| | Cellulophaga baltica 18 | M666_RS07365 | | AraC family transcriptional regulator | insig. | 26 | 34 |
| | Pseudomonas aeruginosa MRSN321 | PFGADD_02762 | mtlR | Transcriptional regulator MtlR | strong | 26 | 34 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_11445 | | AraC family transcriptional regulator | insig. | 26 | 34 |
| | Pseudomonas aeruginosa PUPa3 | NPBIFN_02793 | mtlR | Transcriptional regulator MtlR | strong | 26 | 34 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_01332 | | transcriptional regulator, AraC family | insig. | 25 | 33 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_03060 | | transcriptional regulator, AraC family | insig. | 24 | 32 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS17025 | | AraC family transcriptional regulator | strong | 21 | 89 |
| | Paraburkholderia graminis OAS925 | ABIE53_004928 | | LacI family transcriptional regulator | strong | 25 | 44 |
| | Pseudomonas simiae WCS417 | PS417_10875 | | AraC family transcriptional regulator | insig. | 23 | 36 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2914 | | ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) | sig. | 36 | 28 |
| | Serratia liquefaciens MT49 | IAI46_18640 | | helix-turn-helix domain-containing protein | insig. | 30 | 35 |
| | Klebsiella pneumoniae MRSN742743 | GJGHJB_04897 | araC | AraC family transcriptional regulator | insig. | 30 | 29 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03210 | | transcriptional regulator, AraC family | strong | 30 | 38 |
| | Pseudomonas putida KT2440 | PP_5245 | | Transcriptional regulator, AraC family | insig. | 30 | 32 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1563 | | Transcriptional regulator, AraC family | insig. | 29 | 32 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_21945 | | AraC family transcriptional regulator | insig. | 28 | 30 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS04225 | | helix-turn-helix transcriptional regulator | sig. | 28 | 34 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3186 | | Transcriptional regulator, AraC family | insig. | 25 | 41 |
| | Rhodospirillum rubrum S1H | Rru_A0879 | | Transcriptional Regulator, AraC family (NCBI) | insig. | 25 | 36 |
| | Klebsiella michiganensis M5al | BWI76_RS12430 | | AraC family transcriptional regulator | insig. | 24 | 41 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_28650 | | AraC family transcriptional regulator | insig. | 33 | 30 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_83 | | transcriptional regulator, AraC family | insig. | 30 | 32 |
| | Pseudomonas sp. RS175 | PFR28_02652 | | HTH-type transcriptional regulator CdhR | insig. | 27 | 30 |
| | Pseudomonas orientalis W4I3 | QF045_RS01470 | | DJ-1/PfpI family protein | insig. | 27 | 32 |
| | Rahnella sp. WP5 | EX31_RS06920 | | GlxA family transcriptional regulator | insig. | 26 | 33 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00354 | | transcriptional regulator, AraC family with amidase-like domain | insig. | 25 | 31 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_22755 | | 6-O-methylguanine DNA methyltransferase | insig. | 34 | 31 |
| | Cellulophaga baltica 18 | M666_RS11755 | | AraC family transcriptional regulator | insig. | 22 | 86 |
| | Pseudomonas sp. DMC3 | GFF1052 | | HTH-type transcriptional activator RhaR | cofit | 31 | 29 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS08390 | | GlxA family transcriptional regulator | insig. | 29 | 32 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU0277 | | transcriptional regulator, AraC family (TIGR) | insig. | 29 | 34 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c12510 | | transcriptional regulator, AraC family | insig. | 28 | 31 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS32830 | | AraC family transcriptional regulator | insig. | 27 | 44 |