Homologs of dbpA from Escherichia coli BW25113

dbpA: ATP-dependent RNA helicase, specific for 23S rRNA (NCBI)
SEED: ATP-dependent 23S rRNA helicase DbpA
KEGG: ATP-independent RNA helicase DbpA

Top 100 hits from BLASTp (E < 0.01)

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Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
o	Escherichia coli BL21	ECD_01320		ATP-dependent RNA helicase, specific for 23S rRNA	insig.	100	100
o	Escherichia coli HS(pFamp)R (ATCC 700891)	OHPLBJKB_02338		ATP-dependent RNA helicase DbpA	insig.	100	100
	Escherichia coli BW25113	b1343	dbpA	ATP-dependent RNA helicase, specific for 23S rRNA (NCBI)	insig.	100	100
o	Escherichia coli ECRC101	OKFHMN_02160	dbpA	ATP-dependent RNA helicase DbpA	insig.	100	100
o	Escherichia coli ECRC101	MCAODC_16095	dbpA	ATP-dependent RNA helicase DbpA	insig.	100	100
o	Escherichia coli ECRC102	NIAGMN_26330	dbpA	ATP-dependent RNA helicase DbpA	insig.	100	100
o	Escherichia coli ECRC98	JDDGAC_04720	dbpA	ATP-dependent RNA helicase DbpA	no data	100	100
o	Escherichia coli ECRC99	KEDOAH_26595	dbpA	ATP-dependent RNA helicase DbpA	no data	100	100
o	Escherichia coli ECOR27	NOLOHH_19875	dbpA	ATP-dependent RNA helicase DbpA	no data	99	100
o	Escherichia fergusonii Becca	EFB2_02584		ATP-dependent RNA helicase DbpA	insig.	99	100
o	Escherichia coli ECRC62	BNILDI_18025	dbpA	ATP-dependent RNA helicase DbpA	insig.	99	100
o	Escherichia coli Nissle 1917	ECOLIN_RS08060		ATP-dependent RNA helicase DbpA	no data	99	100
o	Escherichia coli ECOR38	HEPCGN_26000	dbpA	ATP-dependent RNA helicase DbpA	insig.	99	100
o	Enterobacter sp. TBS_079	MPMX20_02441		ATP-dependent RNA helicase DbpA	insig.	91	100
o	Enterobacter asburiae PDN3	EX28DRAFT_1006		Superfamily II DNA and RNA helicases	insig.	91	100
o	Klebsiella michiganensis M5al	BWI76_RS12705		ATP-dependent RNA helicase	insig.	89	100
o	Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868	GFF2649		ATP-dependent 23S rRNA helicase DbpA	insig.	87	100
o	Dickeya dadantii 3937	DDA3937_RS11045		ATP-dependent RNA helicase DbpA	insig.	79	100
o	Dickeya dianthicola 67-19	HGI48_RS11065		ATP-dependent RNA helicase DbpA	insig.	78	100
o	Dickeya dianthicola ME23	DZA65_RS11470		ATP-dependent RNA helicase DbpA	insig.	77	100
o	Pectobacterium carotovorum WPP14	HER17_RS06775		ATP-dependent RNA helicase DbpA	insig.	68	100
o	Serratia liquefaciens MT49	IAI46_14765		ATP-dependent RNA helicase DbpA	insig.	67	100
o	Pantoea sp. MT58	IAI47_15055		ATP-dependent RNA helicase DbpA	insig.	64	100
o	Rahnella sp. WP5	EX31_RS24740		ATP-dependent RNA helicase DbpA	insig.	61	100
o	Erwinia tracheiphila SCR3	LU632_RS11995	dbpA	ATP-dependent RNA helicase DbpA	insig.	62	100
o	Pseudomonas syringae pv. syringae B728a	Psyr_0516		ATP-dependent RNA helicase DbpA	insig.	56	100
o	Pseudomonas syringae pv. syringae B728a ΔmexB	Psyr_0516		ATP-dependent RNA helicase DbpA	insig.	56	100
o	Pseudomonas stutzeri RCH2	Psest_0344		Superfamily II DNA and RNA helicases	insig.	57	100
o	Pseudomonas fluorescens FW300-N2C3	AO356_13770		ATP-dependent RNA helicase	strong	55	100
o	Pseudomonas fluorescens GW456-L13	PfGW456L13_1078		ATP-dependent 23S rRNA helicase DbpA	insig.	55	100
o	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_4673		ATP-dependent 23S rRNA helicase DbpA	strong	55	100
o	Pseudomonas sp. RS175	PFR28_04172		ATP-dependent RNA helicase DbpA	sig.	55	100
o	Rhodanobacter denitrificans MT42	LRK55_RS09695		ATP-dependent RNA helicase DbpA	insig.	55	100
o	Rhodanobacter denitrificans FW104-10B01	LRK54_RS10055		ATP-dependent RNA helicase DbpA	insig.	55	100
o	Pseudomonas simiae WCS417	PS417_26370		RNA helicase	strong	54	100
o	Pseudomonas fluorescens SBW25	PFLU_RS28020		ATP-dependent RNA helicase DbpA	insig.	54	100
o	Pseudomonas fluorescens SBW25-INTG	PFLU_RS28020		ATP-dependent RNA helicase DbpA	strong	54	100
o	Pseudomonas fluorescens FW300-N2E3	AO353_07850		ATP-dependent RNA helicase	strong	54	100
o	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_2412		ATP-dependent 23S rRNA helicase DbpA	strong	54	100
o	Shewanella sp. ANA-3	Shewana3_3384		ATP-dependent RNA helicase DbpA (RefSeq)	insig.	54	100
o	Pseudomonas sp. S08-1	OH686_14770		ATP-dependent 23S rRNA helicase DbpA	insig.	55	100
o	Pseudomonas putida KT2440	PP_4952		ATP-dependent RNA helicase, specific for 23S rRNA	insig.	55	100
o	Rhodanobacter sp. FW510-T8	OKGIIK_16320	dbpA	ATP-dependent RNA helicase DbpA	insig.	54	100
o	Dyella japonica UNC79MFTsu3.2	ABZR86_RS05195		ATP-dependent RNA helicase DbpA	insig.	54	100
o	Shewanella amazonensis SB2B	Sama_0752		ATP-dependent RNA helicase DbpA (RefSeq)	insig.	54	100
o	Shewanella oneidensis MR-1	SO0897	dbpA	ATP-dependent RNA helicase DbpA (NCBI ptt file)	insig.	54	100
o	Vibrio cholerae E7946 ATCC 55056	CSW01_12980		ATP-dependent RNA helicase DbpA	insig.	54	100
o	Shewanella loihica PV-4	Shew_0598		ATP-dependent RNA helicase DbpA (RefSeq)	insig.	53	100
o	Kangiella aquimarina DSM 16071	B158DRAFT_2047		ATP-dependent RNA helicase DbpA (EC 5.99.1.-)	insig.	53	99
o	Hydrogenophaga sp. GW460-11-11-14-LB1	GFF5449		ATP-dependent 23S rRNA helicase DbpA	insig.	53	100
o	Ralstonia solanacearum GMI1000	RS_RS03120		ATP-dependent RNA helicase DbpA	insig.	54	99
o	Ralstonia solanacearum PSI07	RPSI07_RS20905		ATP-dependent RNA helicase DbpA	insig.	53	99
o	Cupriavidus basilensis FW507-4G11	RR42_RS00295		DEAD/DEAH box helicase	sig.	53	99
o	Marinobacter adhaerens HP15	HP15_1329		DEAD/DEAH box helicase domain protein	sig.	52	99
o	Ralstonia sp. UNC404CL21Col	ABZR87_RS19855		ATP-dependent RNA helicase DbpA	insig.	54	99
o	Lysobacter sp. OAE881	ABIE51_RS14930		ATP-dependent RNA helicase DbpA	insig.	53	99
o	Burkholderia phytofirmans PsJN	BPHYT_RS00150		DEAD/DEAH box helicase	insig.	53	96
o	Paraburkholderia graminis OAS925	ABIE53_000368		ATP-independent RNA helicase DbpA	insig.	52	99
o	Dechlorosoma suillum PS	Dsui_2946		DNA/RNA helicase, superfamily II	insig.	51	97
o	Xanthomonas campestris pv. campestris strain 8004	Xcc-8004.2274.1		ATP-dependent 23S rRNA helicase DbpA	sig.	52	99
o	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_02294		ATP-dependent RNA helicase DbpA	insig.	52	99
o	Paraburkholderia sabiae LMG 24235	QEN71_RS00065		ATP-dependent RNA helicase DbpA	cofit	53	99
o	Castellaniella sp019104865 MT123	ABCV34_RS04635		ATP-dependent RNA helicase DbpA	insig.	52	99
o	Variovorax sp. OAS795	ABID97_RS02340		ATP-dependent RNA helicase DbpA	insig.	49	98
o	Acidovorax sp. GW101-3H11	Ac3H11_4671		ATP-dependent 23S rRNA helicase DbpA	insig.	51	100
o	Variovorax sp. SCN45	GFF7138		ATP-dependent 23S rRNA helicase DbpA	insig.	50	98
o	Alteromonas macleodii MIT1002	MIT1002_03748		ATP-independent RNA helicase DbpA	no data	44	98
o	Pontibacter actiniarum KMM 6156, DSM 19842	CA264_06050		ATP-dependent RNA helicase	insig.	43	100
	Pontibacter actiniarum KMM 6156, DSM 19842	CA264_05910		RNA helicase	strong	42	75
	Echinicola vietnamensis KMM 6221, DSM 17526	Echvi_3056		Superfamily II DNA and RNA helicases	no data	42	77
	Desulfovibrio vulgaris Miyazaki F	DvMF_2125		DEAD/DEAH box helicase domain protein (RefSeq)	no data	41	80
	Shewanella amazonensis SB2B	Sama_0512		ATP-dependent RNA helicase DeaD (RefSeq)	strong	41	79
	Rahnella sp. WP5	EX31_RS08510		DEAD/DEAH family ATP-dependent RNA helicase	insig.	44	76
	Dickeya dianthicola 67-19	HGI48_RS03275		DEAD/DEAH family ATP-dependent RNA helicase	insig.	44	76
	Dickeya dianthicola ME23	DZA65_RS03270		DEAD/DEAH family ATP-dependent RNA helicase	no data	44	76
	Shewanella loihica PV-4	Shew_0531		DEAD/DEAH box helicase domain-containing protein (RefSeq)	strong	40	82
	Desulfovibrio vulgaris Hildenborough JW710	DVU3310	deaD	ATP-dependent RNA helicase, DEAD/DEAH family (TIGR)	strong	41	81
	Erwinia tracheiphila SCR3	LU632_RS21030		DEAD/DEAH family ATP-dependent RNA helicase	no data	45	76
	Enterobacter asburiae PDN3	EX28DRAFT_3211		Superfamily II DNA and RNA helicases	no data	44	76
	Serratia liquefaciens MT49	IAI46_01970		DEAD/DEAH family ATP-dependent RNA helicase	cofit	44	76
	Pantoea sp. MT58	IAI47_16990		DEAD/DEAH family ATP-dependent RNA helicase	strong	44	73
	Dickeya dadantii 3937	DDA3937_RS03100		DEAD/DEAH family ATP-dependent RNA helicase	insig.	44	76
	Methanococcus maripaludis JJ	MMJJ_RS02855		DEAD/DEAH box helicase	strong	40	81
	Methanococcus maripaludis S2	MMP_RS02420		DEAD/DEAH box helicase	no data	40	81
	Klebsiella michiganensis M5al	BWI76_RS25055		DEAD/DEAH family ATP-dependent RNA helicase	no data	44	76
	Escherichia coli BL21	ECD_03029		ATP-dependent RNA helicase	sig.	44	76
	Escherichia fergusonii Becca	EFB2_00661		ATP-dependent RNA helicase DeaD	sig.	44	76
	Escherichia coli ECOR38	HEPCGN_17030	deaD	ATP-dependent RNA helicase DeaD	strong	44	76
	Escherichia coli ECRC62	BNILDI_01580	deaD	ATP-dependent RNA helicase DeaD	sig.	44	76
	Escherichia coli HS(pFamp)R (ATCC 700891)	OHPLBJKB_00538		ATP-dependent RNA helicase DeaD	cofit	44	76
	Escherichia coli Nissle 1917	ECOLIN_RS18165		ATP-dependent RNA helicase DeaD	cofit	44	76
	Escherichia coli BW25113	b3162	deaD	inducible ATP-independent RNA helicase (VIMSS)	strong	44	76
	Escherichia coli ECOR27	NOLOHH_09955	deaD	ATP-dependent RNA helicase DeaD	no data	44	76
	Escherichia coli ECRC101	OKFHMN_18155	deaD	ATP-dependent RNA helicase DeaD	sig.	44	76
	Escherichia coli ECRC101	MCAODC_08675	deaD	ATP-dependent RNA helicase DeaD	sig.	44	76
	Escherichia coli ECRC102	NIAGMN_15915	deaD	ATP-dependent RNA helicase DeaD	insig.	44	76
	Escherichia coli ECRC98	JDDGAC_21780	deaD	ATP-dependent RNA helicase DeaD	no data	44	76
	Shewanella oneidensis MR-1	SO4034	deaD	ATP-dependent RNA helicase DeaD (NCBI ptt file)	strong	40	79
	Xanthomonas campestris pv. campestris strain 8004	Xcc-8004.1841.1		DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13)	insig.	44	72
	Escherichia coli ECRC99	KEDOAH_09995	deaD	ATP-dependent RNA helicase DeaD	no data	43	76