Conservation of cofitness between Xcc-8004.1710.1 and Xcc-8004.3283.1 in Xanthomonas campestris pv. campestris strain 8004

77 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.1710.1 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) 1.0 Xcc-8004.3283.1 Phosphoserine aminotransferase (EC 2.6.1.52) 0.67 5
Lysobacter sp. OAE881 0.59 ABIE51_RS16065 pyrroline-5-carboxylate reductase 0.79 ABIE51_RS12150 3-phosphoserine/phosphohydroxythreonine transaminase 0.83 44
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS10425 pyrroline-5-carboxylate reductase 0.63 ABZR86_RS02220 3-phosphoserine/phosphohydroxythreonine transaminase 0.87 46
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_11135 proC pyrroline-5-carboxylate reductase 0.63 OKGIIK_06910 serC 3-phosphoserine/phosphohydroxythreonine transaminase low > 52
Pseudomonas sp. S08-1 0.46 OH686_10980 pyrroline-5-carboxylate reductase 0.49 OH686_20865 phosphoserine transaminase — —
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS04260 pyrroline-5-carboxylate reductase 0.63 LRK54_RS00400 3-phosphoserine/phosphohydroxythreonine transaminase 0.68 34
Rhodanobacter denitrificans MT42 0.45 LRK55_RS04030 pyrroline-5-carboxylate reductase 0.63 LRK55_RS00140 3-phosphoserine/phosphohydroxythreonine transaminase — —
Pseudomonas stutzeri RCH2 0.44 Psest_0283 pyrroline-5-carboxylate reductase 0.49 Psest_1983 phosphoserine aminotransferase — —
Pseudomonas putida KT2440 0.43 PP_5095 pyrroline-5-carboxylate reductase 0.49 PP_1768 phosphoserine aminotransferase — —
Pseudomonas fluorescens FW300-N2E2 0.43 Pf6N2E2_4600 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) 0.48 Pf6N2E2_2521 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Pseudomonas fluorescens FW300-N2C3 0.42 AO356_13420 pyrroline-5-carboxylate reductase 0.48 AO356_03470 3-phosphoserine/phosphohydroxythreonine aminotransferase — —
Pseudomonas sp. RS175 0.41 PFR28_04243 Pyrroline-5-carboxylate reductase 0.47 PFR28_00906 Phosphoserine aminotransferase — —
Pseudomonas syringae pv. syringae B728a 0.41 Psyr_0476 pyrroline-5-carboxylate reductase 0.48 Psyr_3646 phosphoserine aminotransferase apoenzyme — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.41 Psyr_0476 pyrroline-5-carboxylate reductase 0.48 Psyr_3646 phosphoserine aminotransferase apoenzyme — —
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_2341 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) 0.36 Pf1N1B4_351 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_08165 pyrroline-5-carboxylate reductase 0.48 AO353_02075 3-phosphoserine/phosphohydroxythreonine aminotransferase 0.68 13
Pseudomonas fluorescens SBW25 0.41 PFLU_RS28375 pyrroline-5-carboxylate reductase 0.48 PFLU_RS08090 3-phosphoserine/phosphohydroxythreonine transaminase — —
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS28375 pyrroline-5-carboxylate reductase 0.48 PFLU_RS08090 3-phosphoserine/phosphohydroxythreonine transaminase — —
Pseudomonas simiae WCS417 0.41 PS417_26730 pyrroline-5-carboxylate reductase 0.48 PS417_08120 MFS transporter — —
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_1010 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) 0.47 PfGW456L13_2175 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Marinobacter adhaerens HP15 0.37 HP15_287 pyrroline-5-carboxylate reductase 0.47 HP15_1361 phosphoserine aminotransferase — —
Dechlorosoma suillum PS 0.36 Dsui_0602 pyrroline-5-carboxylate reductase 0.48 Dsui_1939 phosphoserine aminotransferase — —
Variovorax sp. OAS795 0.35 ABID97_RS01555 pyrroline-5-carboxylate reductase 0.46 ABID97_RS09520 3-phosphoserine/phosphohydroxythreonine transaminase — —
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS26600 pyrroline-5-carboxylate reductase 0.49 QEN71_RS04065 3-phosphoserine/phosphohydroxythreonine transaminase 0.95 12
Kangiella aquimarina DSM 16071 0.35 B158DRAFT_0197 pyrroline-5-carboxylate reductase 0.46 B158DRAFT_2322 phosphoserine aminotransferase apoenzyme (EC 2.6.1.52) — —
Ralstonia sp. UNC404CL21Col 0.34 ABZR87_RS01230 pyrroline-5-carboxylate reductase 0.48 ABZR87_RS09445 3-phosphoserine/phosphohydroxythreonine transaminase — —
Acidovorax sp. GW101-3H11 0.34 Ac3H11_788 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) 0.49 Ac3H11_2573 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Acinetobacter radioresistens SK82 0.34 MPMX26_00572 Pyrroline-5-carboxylate reductase 0.48 MPMX26_02219 Phosphoserine aminotransferase — —
Ralstonia solanacearum GMI1000 0.34 RS_RS13440 pyrroline-5-carboxylate reductase 0.47 RS_RS04490 3-phosphoserine/phosphohydroxythreonine aminotransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.33 GFF2806 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) 0.48 GFF5342 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Variovorax sp. SCN45 0.33 GFF5553 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) 0.49 GFF6183 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Paraburkholderia graminis OAS925 0.33 ABIE53_000840 pyrroline-5-carboxylate reductase 0.41 ABIE53_003159 phosphoserine aminotransferase 0.60 18
Ralstonia solanacearum UW163 0.33 UW163_RS08045 pyrroline-5-carboxylate reductase 0.47 UW163_RS16055 3-phosphoserine/phosphohydroxythreonine transaminase — —
Ralstonia solanacearum IBSBF1503 0.33 RALBFv3_RS05580 pyrroline-5-carboxylate reductase 0.47 RALBFv3_RS13755 3-phosphoserine/phosphohydroxythreonine transaminase 0.55 27
Paraburkholderia bryophila 376MFSha3.1 0.33 H281DRAFT_04679 pyrroline-5-carboxylate reductase 0.49 H281DRAFT_03926 phosphoserine aminotransferase apoenzyme 0.73 3
Ralstonia solanacearum PSI07 0.33 RPSI07_RS11720 pyrroline-5-carboxylate reductase 0.47 RPSI07_RS19715 3-phosphoserine/phosphohydroxythreonine transaminase 0.71 9
Dickeya dadantii 3937 0.32 DDA3937_RS17305 pyrroline-5-carboxylate reductase 0.53 DDA3937_RS09670 3-phosphoserine/phosphohydroxythreonine transaminase low > 74
Burkholderia phytofirmans PsJN 0.32 BPHYT_RS03490 pyrroline-5-carboxylate reductase 0.49 BPHYT_RS14915 phosphoserine aminotransferase — —
Serratia liquefaciens MT49 0.32 IAI46_21415 pyrroline-5-carboxylate reductase 0.50 IAI46_08635 3-phosphoserine/phosphohydroxythreonine transaminase 0.55 62
Shewanella sp. ANA-3 0.32 Shewana3_1193 pyrroline-5-carboxylate reductase (RefSeq) 0.42 Shewana3_1973 phosphoserine aminotransferase (RefSeq) — —
Shewanella oneidensis MR-1 0.32 SO3354 proC pyrroline-5-carboxylate reductase (NCBI ptt file) 0.42 SO2410 serC phosphoserine aminotransferase (NCBI ptt file) — —
Cupriavidus basilensis FW507-4G11 0.32 RR42_RS17360 pyrroline-5-carboxylate reductase 0.45 RR42_RS04455 MFS transporter — —
Dickeya dianthicola ME23 0.32 DZA65_RS18440 pyrroline-5-carboxylate reductase 0.52 DZA65_RS09990 3-phosphoserine/phosphohydroxythreonine transaminase — —
Dickeya dianthicola 67-19 0.32 HGI48_RS17350 pyrroline-5-carboxylate reductase 0.53 HGI48_RS09680 3-phosphoserine/phosphohydroxythreonine transaminase — —
Shewanella loihica PV-4 0.30 Shew_3016 pyrroline-5-carboxylate reductase (RefSeq) 0.43 Shew_1950 phosphoserine aminotransferase (RefSeq) — —
Herbaspirillum seropedicae SmR1 0.30 HSERO_RS18990 pyrroline-5-carboxylate reductase 0.48 HSERO_RS18435 MFS transporter — —
Rahnella sp. WP5 0.30 EX31_RS02690 pyrroline-5-carboxylate reductase 0.50 EX31_RS18255 3-phosphoserine/phosphohydroxythreonine transaminase low > 89
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_02450 pyrroline-5-carboxylate reductase 0.47 CSW01_05875 3-phosphoserine/phosphohydroxythreonine transaminase — —
Alteromonas macleodii MIT1002 0.30 MIT1002_03062 Pyrroline-5-carboxylate reductase 0.49 MIT1002_02192 Phosphoserine aminotransferase — —
Pectobacterium carotovorum WPP14 0.30 HER17_RS03805 pyrroline-5-carboxylate reductase 0.52 HER17_RS12290 3-phosphoserine/phosphohydroxythreonine transaminase — —
Shewanella amazonensis SB2B 0.30 Sama_2478 pyrroline-5-carboxylate reductase (RefSeq) 0.43 Sama_1732 phosphoserine aminotransferase (RefSeq) — —
Castellaniella sp019104865 MT123 0.29 ABCV34_RS03610 pyrroline-5-carboxylate reductase 0.48 ABCV34_RS07115 3-phosphoserine/phosphohydroxythreonine transaminase — —
Klebsiella michiganensis M5al 0.24 BWI76_RS06170 pyrroline-5-carboxylate reductase 0.50 BWI76_RS09755 phosphoserine transaminase — —
Escherichia fergusonii Becca 0.24 EFB2_03670 Pyrroline-5-carboxylate reductase 0.51 EFB2_03157 Phosphoserine aminotransferase 0.71 19
Escherichia coli ECRC99 0.24 KEDOAH_19355 proC pyrroline-5-carboxylate reductase 0.50 KEDOAH_22245 serC 3-phosphoserine/phosphohydroxythreonine transaminase — —
Escherichia coli ECRC100 0.24 OKFHMN_08610 proC pyrroline-5-carboxylate reductase 0.50 OKFHMN_05490 serC 3-phosphoserine/phosphohydroxythreonine transaminase 0.72 80
Escherichia coli ECRC98 0.24 JDDGAC_12265 proC pyrroline-5-carboxylate reductase 0.50 JDDGAC_09100 serC 3-phosphoserine/phosphohydroxythreonine transaminase 0.81 6
Escherichia coli ECRC101 0.24 MCAODC_27835 proC pyrroline-5-carboxylate reductase 0.50 MCAODC_24880 serC 3-phosphoserine/phosphohydroxythreonine transaminase low > 87
Escherichia coli ECOR38 0.24 HEPCGN_07250 proC pyrroline-5-carboxylate reductase 0.51 HEPCGN_23030 serC 3-phosphoserine/phosphohydroxythreonine transaminase 0.75 71
Escherichia coli ECRC102 0.24 NIAGMN_06665 proC pyrroline-5-carboxylate reductase 0.50 NIAGMN_03210 serC 3-phosphoserine/phosphohydroxythreonine transaminase — —
Escherichia coli Nissle 1917 0.24 ECOLIN_RS02345 pyrroline-5-carboxylate reductase 0.51 ECOLIN_RS04805 3-phosphoserine/phosphohydroxythreonine transaminase 0.80 28
Escherichia coli BW25113 0.24 b0386 proC pyrroline-5-carboxylate reductase (NCBI) 0.50 b0907 serC phosphoserine aminotransferase (NCBI) 0.79 53
Escherichia coli HS(pFamp)R (ATCC 700891) 0.24 OHPLBJKB_03288 Pyrroline-5-carboxylate reductase 0.50 OHPLBJKB_02761 Phosphoserine aminotransferase — —
Escherichia coli BL21 0.24 ECD_00333 pyrroline-5-carboxylate reductase, NAD(P)-binding 0.50 ECD_00911 3-phosphoserine/phosphohydroxythreonine aminotransferase 0.74 37
Escherichia coli ECOR27 0.24 NOLOHH_01535 proC pyrroline-5-carboxylate reductase 0.50 NOLOHH_22050 serC 3-phosphoserine/phosphohydroxythreonine transaminase 0.78 68
Escherichia coli ECRC62 0.24 BNILDI_22950 proC pyrroline-5-carboxylate reductase 0.50 BNILDI_20305 serC 3-phosphoserine/phosphohydroxythreonine transaminase low > 75
Pantoea sp. MT58 0.24 IAI47_14945 pyrroline-5-carboxylate reductase 0.51 IAI47_12865 3-phosphoserine/phosphohydroxythreonine transaminase 0.82 34
Enterobacter asburiae PDN3 0.23 EX28DRAFT_2585 pyrroline-5-carboxylate reductase 0.48 EX28DRAFT_2028 phosphoserine aminotransferase apoenzyme (EC 2.6.1.52) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.23 GFF4283 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) 0.51 GFF3664 Phosphoserine aminotransferase (EC 2.6.1.52) low > 78
Enterobacter sp. TBS_079 0.23 MPMX20_00976 Pyrroline-5-carboxylate reductase 0.50 MPMX20_01566 Phosphoserine aminotransferase 0.89 20
Erwinia tracheiphila SCR3 0.21 LU632_RS18995 proC pyrroline-5-carboxylate reductase 0.52 LU632_RS09790 serC 3-phosphoserine/phosphohydroxythreonine transaminase — —
Phocaeicola dorei CL03T12C01 0.16 ABI39_RS02960 pyrroline-5-carboxylate reductase 0.35 ABI39_RS16905 3-phosphoserine/phosphohydroxythreonine transaminase 0.82 15
Pontibacter actiniarum KMM 6156, DSM 19842 0.15 CA264_07730 pyrroline-5-carboxylate reductase 0.10 CA264_13325 phosphoserine aminotransferase low > 74
Phocaeicola vulgatus CL09T03C04 0.15 HMPREF1058_RS08830 pyrroline-5-carboxylate reductase 0.34 HMPREF1058_RS04300 3-phosphoserine/phosphohydroxythreonine transaminase 0.86 30
Bacteroides ovatus ATCC 8483 0.15 BACOVA_03587 pyrroline-5-carboxylate reductase 0.36 BACOVA_04029 phosphoserine transaminase 0.85 44
Bacteroides stercoris CC31F 0.15 HMPREF1181_RS03440 pyrroline-5-carboxylate reductase 0.36 HMPREF1181_RS16870 3-phosphoserine/phosphohydroxythreonine transaminase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.14 ABZR88_RS09865 pyrroline-5-carboxylate reductase 0.36 ABZR88_RS09230 3-phosphoserine/phosphohydroxythreonine transaminase — —
Bacteroides thetaiotaomicron VPI-5482 0.13 BT3757 pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) 0.36 BT1153 phosphoserine aminotransferase (NCBI ptt file) 0.85 30

Not shown: 19 genomes with orthologs for Xcc-8004.1710.1 only; 2 genomes with orthologs for Xcc-8004.3283.1 only