Conservation of cofitness between Xcc-8004.1010.1 and Xcc-8004.3283.1 in Xanthomonas campestris pv. campestris strain 8004

85 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.1010.1 Aspartate aminotransferase (EC 2.6.1.1) 1.0 Xcc-8004.3283.1 Phosphoserine aminotransferase (EC 2.6.1.52) 0.90 6
Lysobacter sp. OAE881 0.73 ABIE51_RS18840 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.79 ABIE51_RS12150 3-phosphoserine/phosphohydroxythreonine transaminase low > 62
Dyella japonica UNC79MFTsu3.2 0.56 ABZR86_RS12435 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.63 ABZR86_RS02220 3-phosphoserine/phosphohydroxythreonine transaminase 0.73 39
Rhodanobacter sp. FW510-T8 0.55 OKGIIK_12720 aspB aminotransferase 0.63 OKGIIK_06910 serC 3-phosphoserine/phosphohydroxythreonine transaminase 0.91 15
Rhodanobacter sp000427505 FW510-R12 0.55 LRK53_RS04055 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.63 LRK53_RS09750 3-phosphoserine/phosphohydroxythreonine transaminase 0.79 12
Rhodanobacter denitrificans MT42 0.54 LRK55_RS10860 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.63 LRK55_RS00140 3-phosphoserine/phosphohydroxythreonine transaminase low > 63
Rhodanobacter denitrificans FW104-10B01 0.54 LRK54_RS11155 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.63 LRK54_RS00400 3-phosphoserine/phosphohydroxythreonine transaminase low > 59
Acinetobacter baumannii LAC-4 0.43 RR41_RS11535 pyridoxal phosphate-dependent aminotransferase 0.50 RR41_RS04525 3-phosphoserine/phosphohydroxythreonine transaminase — —
Marinobacter adhaerens HP15 0.43 HP15_2095 aspartate aminotransferase 0.47 HP15_1361 phosphoserine aminotransferase — —
Acinetobacter radioresistens SK82 0.41 MPMX26_01871 Glutamate-pyruvate aminotransferase AlaA 0.48 MPMX26_02219 Phosphoserine aminotransferase — —
Herbaspirillum seropedicae SmR1 0.41 HSERO_RS10455 aminotransferase 0.48 HSERO_RS18435 MFS transporter — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.41 CA264_06065 aminotransferase 0.10 CA264_13325 phosphoserine aminotransferase low > 74
Serratia liquefaciens MT49 0.40 IAI46_17720 pyridoxal phosphate-dependent aminotransferase 0.50 IAI46_08635 3-phosphoserine/phosphohydroxythreonine transaminase low > 87
Erwinia amylovora T8 0.40 OLJFJH_11400 Glutamate-pyruvate aminotransferase AlaA 0.50 OLJFJH_16140 3-phosphoserine/phosphohydroxythreonine transaminase — —
Shewanella loihica PV-4 0.40 Shew_1914 aminotransferase AlaT (RefSeq) 0.43 Shew_1950 phosphoserine aminotransferase (RefSeq) — —
Pantoea agglomerans CFBP13505 P0401 0.40 PagCFBP13505_RS00325 pyridoxal phosphate-dependent aminotransferase 0.51 PagCFBP13505_RS04465 3-phosphoserine/phosphohydroxythreonine transaminase low > 74
Escherichia coli ECRC62 0.40 BNILDI_13365 alaA alanine transaminase AlaA 0.50 BNILDI_20305 serC 3-phosphoserine/phosphohydroxythreonine transaminase low > 75
Escherichia coli ECRC101 0.40 MCAODC_13865 alaA alanine transaminase AlaA 0.50 MCAODC_24880 serC 3-phosphoserine/phosphohydroxythreonine transaminase low > 87
Escherichia coli ECRC100 0.40 OKFHMN_22825 alaA alanine transaminase AlaA 0.50 OKFHMN_05490 serC 3-phosphoserine/phosphohydroxythreonine transaminase low > 79
Shewanella oneidensis MR-1 0.40 SO2483 aspartate aminotransferase, putative (NCBI ptt file) 0.42 SO2410 serC phosphoserine aminotransferase (NCBI ptt file) — —
Escherichia coli BW25113 0.40 b2290 yfbQ aspartate aminotransferase (NCBI) 0.50 b0907 serC phosphoserine aminotransferase (NCBI) 0.50 50
Escherichia coli ECOR38 0.40 HEPCGN_22030 alaA alanine transaminase AlaA 0.51 HEPCGN_23030 serC 3-phosphoserine/phosphohydroxythreonine transaminase low > 88
Escherichia coli ECRC102 0.40 NIAGMN_20595 alaA alanine transaminase AlaA 0.50 NIAGMN_03210 serC 3-phosphoserine/phosphohydroxythreonine transaminase low > 80
Escherichia fergusonii Becca 0.40 EFB2_01568 Glutamate-pyruvate aminotransferase AlaA 0.51 EFB2_03157 Phosphoserine aminotransferase low > 86
Escherichia coli Nissle 1917 0.40 ECOLIN_RS13295 alanine transaminase AlaA 0.51 ECOLIN_RS04805 3-phosphoserine/phosphohydroxythreonine transaminase low > 55
Escherichia coli ECRC98 0.40 JDDGAC_26790 alaA alanine transaminase AlaA 0.50 JDDGAC_09100 serC 3-phosphoserine/phosphohydroxythreonine transaminase low > 87
Escherichia coli ECRC99 0.40 KEDOAH_05370 alaA alanine transaminase AlaA 0.50 KEDOAH_22245 serC 3-phosphoserine/phosphohydroxythreonine transaminase — —
Escherichia coli ECOR27 0.40 NOLOHH_14445 alaA alanine transaminase AlaA 0.50 NOLOHH_22050 serC 3-phosphoserine/phosphohydroxythreonine transaminase low > 76
Escherichia coli BL21 0.40 ECD_02215 glutamate-pyruvate aminotransferase; glutamic-pyruvic transaminase (GPT); alanine transaminase 0.50 ECD_00911 3-phosphoserine/phosphohydroxythreonine aminotransferase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_01415 Glutamate-pyruvate aminotransferase AlaA 0.50 OHPLBJKB_02761 Phosphoserine aminotransferase — —
Klebsiella michiganensis M5al 0.40 BWI76_RS20205 aminotransferase AlaT 0.50 BWI76_RS09755 phosphoserine transaminase 0.27 6
Pantoea sp. MT58 0.40 IAI47_06350 pyridoxal phosphate-dependent aminotransferase 0.51 IAI47_12865 3-phosphoserine/phosphohydroxythreonine transaminase 0.43 34
Dickeya dianthicola ME23 0.40 DZA65_RS14995 pyridoxal phosphate-dependent aminotransferase 0.52 DZA65_RS09990 3-phosphoserine/phosphohydroxythreonine transaminase low > 75
Dickeya dadantii 3937 0.40 DDA3937_RS14345 pyridoxal phosphate-dependent aminotransferase 0.53 DDA3937_RS09670 3-phosphoserine/phosphohydroxythreonine transaminase low > 74
Pectobacterium carotovorum WPP14 0.40 HER17_RS07115 pyridoxal phosphate-dependent aminotransferase 0.52 HER17_RS12290 3-phosphoserine/phosphohydroxythreonine transaminase — —
Vibrio cholerae E7946 ATCC 55056 0.40 CSW01_09870 pyridoxal phosphate-dependent aminotransferase 0.47 CSW01_05875 3-phosphoserine/phosphohydroxythreonine transaminase — —
Dickeya dianthicola 67-19 0.40 HGI48_RS14320 pyridoxal phosphate-dependent aminotransferase 0.53 HGI48_RS09680 3-phosphoserine/phosphohydroxythreonine transaminase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF1894 Aspartate aminotransferase (EC 2.6.1.1) 0.51 GFF3664 Phosphoserine aminotransferase (EC 2.6.1.52) low > 78
Shewanella sp. ANA-3 0.40 Shewana3_2145 aminotransferase AlaT (RefSeq) 0.42 Shewana3_1973 phosphoserine aminotransferase (RefSeq) — —
Klebsiella pneumoniae MKP103 0.40 KDGMDA_27080 alanine transaminase AlaA 0.51 KDGMDA_17965 3-phosphoserine/phosphohydroxythreonine transaminase low > 95
Enterobacter sp. TBS_079 0.40 MPMX20_03220 Glutamate-pyruvate aminotransferase AlaA 0.50 MPMX20_01566 Phosphoserine aminotransferase low > 85
Dechlorosoma suillum PS 0.40 Dsui_2908 aspartate/tyrosine/aromatic aminotransferase 0.48 Dsui_1939 phosphoserine aminotransferase — —
Enterobacter asburiae PDN3 0.39 EX28DRAFT_0319 Aspartate/tyrosine/aromatic aminotransferase 0.48 EX28DRAFT_2028 phosphoserine aminotransferase apoenzyme (EC 2.6.1.52) — —
Pseudomonas sp. S08-1 0.39 OH686_22575 Alanine transaminase 0.49 OH686_20865 phosphoserine transaminase — —
Erwinia tracheiphila SCR3 0.39 LU632_RS07955 pyridoxal phosphate-dependent aminotransferase 0.52 LU632_RS09790 serC 3-phosphoserine/phosphohydroxythreonine transaminase — —
Pseudomonas aeruginosa MRSN321 0.39 DY961_RS02855 pyridoxal phosphate-dependent aminotransferase 0.50 DY961_RS01105 serC;go_function=catalytic 3-phosphoserine/phosphohydroxythreonine transaminase — —
Pseudomonas aeruginosa PA14 0.39 IKLFDK_14365 aminotransferase 0.50 IKLFDK_16095 3-phosphoserine/phosphohydroxythreonine transaminase — —
Erwinia tracheiphila HP pepo 2.2 0.39 IJEDHG_18035 aspB aminotransferase 0.52 IJEDHG_20270 serC 3-phosphoserine/phosphohydroxythreonine transaminase — —
Cupriavidus basilensis FW507-4G11 0.39 RR42_RS12545 aminotransferase 0.45 RR42_RS04455 MFS transporter — —
Pseudomonas aeruginosa PUPa3 0.39 DQ20_RS32740 pyridoxal phosphate-dependent aminotransferase 0.50 DQ20_RS34440 serC;go_function=catalytic 3-phosphoserine/phosphohydroxythreonine transaminase — —
Shewanella amazonensis SB2B 0.39 Sama_1697 aminotransferase AlaT (RefSeq) 0.43 Sama_1732 phosphoserine aminotransferase (RefSeq) — —
Alteromonas macleodii MIT1002 0.39 MIT1002_02306 Glutamate-pyruvate aminotransferase AlaA 0.49 MIT1002_02192 Phosphoserine aminotransferase — —
Pseudomonas segetis P6 0.39 ACVTMO_RS11295 pyridoxal phosphate-dependent aminotransferase 0.49 ACVTMO_RS14380 serC 3-phosphoserine/phosphohydroxythreonine transaminase — —
Methylophilus sp. DMC18 0.39 GFF1162 Glutamate-pyruvate aminotransferase AlaA 0.50 GFF664 Phosphoserine aminotransferase — —
Variovorax sp. SCN45 0.39 GFF2803 Alanine transaminase (EC 2.6.1.2) 0.49 GFF6183 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Pseudomonas stutzeri RCH2 0.38 Psest_1772 Aspartate/tyrosine/aromatic aminotransferase 0.49 Psest_1983 phosphoserine aminotransferase — —
Acidovorax sp. GW101-3H11 0.38 Ac3H11_1508 Aspartate aminotransferase (EC 2.6.1.1) 0.49 Ac3H11_2573 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Variovorax sp. OAS795 0.38 ABID97_RS10885 pyridoxal phosphate-dependent aminotransferase 0.46 ABID97_RS09520 3-phosphoserine/phosphohydroxythreonine transaminase — —
Ralstonia solanacearum GMI1000 0.38 RS_RS06650 pyridoxal phosphate-dependent aminotransferase 0.47 RS_RS04490 3-phosphoserine/phosphohydroxythreonine aminotransferase 0.69 10
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_3615 Aminotransferase, class I and II 0.48 Psyr_3646 phosphoserine aminotransferase apoenzyme — —
Pseudomonas sp. SVBP6 0.38 COO64_RS05980 pyridoxal phosphate-dependent aminotransferase 0.50 COO64_RS06750 serC 3-phosphoserine/phosphohydroxythreonine transaminase — —
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS11440 pyridoxal phosphate-dependent aminotransferase 0.48 ABZR87_RS09445 3-phosphoserine/phosphohydroxythreonine transaminase 0.90 1
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_3615 Aminotransferase, class I and II 0.48 Psyr_3646 phosphoserine aminotransferase apoenzyme — —
Pseudomonas fluorescens FW300-N2E2 0.38 Pf6N2E2_2446 Aspartate aminotransferase (EC 2.6.1.1) 0.48 Pf6N2E2_2521 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS15870 pyridoxal phosphate-dependent aminotransferase 0.47 RALBFv3_RS13755 3-phosphoserine/phosphohydroxythreonine transaminase 0.89 2
Ralstonia solanacearum UW163 0.38 UW163_RS13315 pyridoxal phosphate-dependent aminotransferase 0.47 UW163_RS16055 3-phosphoserine/phosphohydroxythreonine transaminase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.38 GFF3934 Aspartate aminotransferase (EC 2.6.1.1) 0.48 GFF5342 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Ralstonia solanacearum PSI07 0.38 RPSI07_RS17495 pyridoxal phosphate-dependent aminotransferase 0.47 RPSI07_RS19715 3-phosphoserine/phosphohydroxythreonine transaminase 0.84 3
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_03090 aminotransferase 0.48 AO356_03470 3-phosphoserine/phosphohydroxythreonine aminotransferase — —
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_2252 Aspartate aminotransferase (EC 2.6.1.1) 0.47 PfGW456L13_2175 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Pseudomonas sp. RS175 0.38 PFR28_00984 Glutamate-pyruvate aminotransferase AlaA 0.47 PFR28_00906 Phosphoserine aminotransferase — —
Pseudomonas simiae WCS417 0.38 PS417_08560 aminotransferase 0.48 PS417_08120 MFS transporter — —
Pseudomonas orientalis W4I3 0.38 QF045_RS11285 pyridoxal phosphate-dependent aminotransferase 0.48 QF045_RS10840 3-phosphoserine/phosphohydroxythreonine transaminase — —
Pseudomonas fluorescens FW300-N1B4 0.38 Pf1N1B4_261 Aspartate aminotransferase (EC 2.6.1.1) 0.36 Pf1N1B4_351 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_19150 aminotransferase 0.48 AO353_02075 3-phosphoserine/phosphohydroxythreonine aminotransferase low > 101
Pseudomonas lactucae CFBP13502 0.38 GEMAOFIL_01844 Glutamate-pyruvate aminotransferase AlaA 0.48 GEMAOFIL_01760 Phosphoserine aminotransferase low > 96
Pseudomonas sp. BP01 0.38 JOY50_RS16985 pyridoxal phosphate-dependent aminotransferase 0.49 JOY50_RS16145 serC 3-phosphoserine/phosphohydroxythreonine transaminase — —
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS08510 pyridoxal phosphate-dependent aminotransferase 0.48 PFLU_RS08090 3-phosphoserine/phosphohydroxythreonine transaminase — —
Pseudomonas fluorescens SBW25 0.37 PFLU_RS08510 pyridoxal phosphate-dependent aminotransferase 0.48 PFLU_RS08090 3-phosphoserine/phosphohydroxythreonine transaminase — —
Pseudomonas putida KT2440 0.37 PP_1872 glutamate-pyruvate aminotransferase 0.49 PP_1768 phosphoserine aminotransferase — —
Rahnella sp. WP5 0.37 EX31_RS19445 pyridoxal phosphate-dependent aminotransferase 0.50 EX31_RS18255 3-phosphoserine/phosphohydroxythreonine transaminase low > 89
Pseudomonas sp. DMC3 0.37 GFF4596 Glutamate-pyruvate aminotransferase AlaA 0.48 GFF4678 Phosphoserine aminotransferase — —
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS22410 pyridoxal phosphate-dependent aminotransferase 0.49 QEN71_RS04065 3-phosphoserine/phosphohydroxythreonine transaminase 0.81 38
Burkholderia phytofirmans PsJN 0.35 BPHYT_RS08950 aminotransferase 0.49 BPHYT_RS14915 phosphoserine aminotransferase 0.90 2
Paraburkholderia graminis OAS925 0.35 ABIE53_002025 alanine-synthesizing transaminase 0.41 ABIE53_003159 phosphoserine aminotransferase 0.33 90
Paraburkholderia bryophila 376MFSha3.1 0.35 H281DRAFT_00809 alanine-synthesizing transaminase 0.49 H281DRAFT_03926 phosphoserine aminotransferase apoenzyme low > 103

Not shown: 14 genomes with orthologs for Xcc-8004.1010.1 only; 11 genomes with orthologs for Xcc-8004.3283.1 only