Conservation of cofitness between Xcc-8004.2012.1 and Xcc-8004.3281.1 in Xanthomonas campestris pv. campestris strain 8004

72 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.2012.1 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 1.0 Xcc-8004.3281.1 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) 0.80 9
Lysobacter sp. OAE881 0.72 ABIE51_RS15390 5-(carboxyamino)imidazole ribonucleotide synthase 0.70 ABIE51_RS12135 3-phosphoshikimate 1-carboxyvinyltransferase — —
Rhodanobacter sp. FW510-T8 0.63 OKGIIK_03050 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.68 OKGIIK_06920 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Rhodanobacter denitrificans MT42 0.63 LRK55_RS13530 5-(carboxyamino)imidazole ribonucleotide synthase 0.65 LRK55_RS00130 3-phosphoshikimate 1-carboxyvinyltransferase low > 63
Rhodanobacter denitrificans FW104-10B01 0.62 LRK54_RS13815 5-(carboxyamino)imidazole ribonucleotide synthase 0.64 LRK54_RS00390 3-phosphoshikimate 1-carboxyvinyltransferase — —
Dyella japonica UNC79MFTsu3.2 0.60 ABZR86_RS09830 5-(carboxyamino)imidazole ribonucleotide synthase 0.68 ABZR86_RS02230 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase 0.17 Psyr_0888 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase 0.17 Psyr_0888 3-phosphoshikimate 1-carboxyvinyltransferase — —
Caulobacter crescentus NA1000 Δfur 0.40 CCNA_03392 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit 0.40 CCNA_03704 3-phosphoshikimate 1-carboxyvinyltransferase low > 67
Caulobacter crescentus NA1000 0.40 CCNA_03392 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit 0.40 CCNA_03704 3-phosphoshikimate 1-carboxyvinyltransferase — —
Bosea sp. OAE506 0.38 ABIE41_RS09245 5-(carboxyamino)imidazole ribonucleotide synthase 0.39 ABIE41_RS03910 3-phosphoshikimate 1-carboxyvinyltransferase — —
Rhodopseudomonas palustris CGA009 0.38 TX73_021645 5-(carboxyamino)imidazole ribonucleotide synthase 0.37 TX73_000320 3-phosphoshikimate 1-carboxyvinyltransferase — —
Azospirillum brasilense Sp245 0.36 AZOBR_RS06140 phosphoribosylaminoimidazole carboxylase 0.37 AZOBR_RS03090 3-phosphoshikimate 1-carboxyvinyltransferase — —
Sphingomonas koreensis DSMZ 15582 0.36 Ga0059261_1428 5-(carboxyamino)imidazole ribonucleotide synthase 0.42 Ga0059261_0167 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) — —
Rhizobium sp. OAE497 0.36 ABIE40_RS16070 5-(carboxyamino)imidazole ribonucleotide synthase 0.14 ABIE40_RS05420 3-phosphoshikimate 1-carboxyvinyltransferase — —
Sinorhizobium meliloti 1021 0.36 SMc04002 phosphoribosylaminoimidazole carboxylase ATPase subunit 0.40 SMc00333 3-phosphoshikimate 1-carboxyvinyltransferase — —
Agrobacterium fabrum C58 0.36 Atu3755 phosphoribosylaminoimidazole carboxylase ATPase subunit 0.14 Atu0642 3-phosphoshikimate 1-carboxyvinyltransferase — —
Vibrio cholerae E7946 ATCC 55056 0.35 CSW01_00260 5-(carboxyamino)imidazole ribonucleotide synthase 0.18 CSW01_08705 3-phosphoshikimate 1-carboxyvinyltransferase low > 62
Dinoroseobacter shibae DFL-12 0.35 Dshi_0680 phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) 0.37 Dshi_1022 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) — —
Brevundimonas sp. GW460-12-10-14-LB2 0.34 A4249_RS08935 5-(carboxyamino)imidazole ribonucleotide synthase 0.39 A4249_RS10920 3-phosphoshikimate 1-carboxyvinyltransferase — —
Alteromonas macleodii MIT1002 0.34 MIT1002_00522 N5-carboxyaminoimidazole ribonucleotide synthase 0.17 MIT1002_02191 3-phosphoshikimate 1-carboxyvinyltransferase — —
Phaeobacter inhibens DSM 17395 0.34 PGA1_c24870 phosphoribosylaminoimidazole carboxylase ATPase subunit PurK 0.40 PGA1_c04810 3-phosphoshikimate 1-carboxyvinyltransferase AroA — —
Rhodospirillum rubrum S1H 0.34 Rru_A1051 Phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI) 0.40 Rru_A0295 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) — —
Azospirillum sp. SherDot2 0.33 MPMX19_01418 N5-carboxyaminoimidazole ribonucleotide synthase 0.37 MPMX19_02233 3-phosphoshikimate 1-carboxyvinyltransferase — —
Herbaspirillum seropedicae SmR1 0.32 HSERO_RS03370 phosphoribosylaminoimidazole carboxylase 0.18 HSERO_RS18420 3-phosphoshikimate 1-carboxyvinyltransferase — —
Magnetospirillum magneticum AMB-1 0.31 AMB_RS11140 5-(carboxyamino)imidazole ribonucleotide synthase 0.39 AMB_RS21555 3-phosphoshikimate 1-carboxyvinyltransferase — —
Kangiella aquimarina DSM 16071 0.31 B158DRAFT_0610 5-(carboxyamino)imidazole ribonucleotide synthase 0.13 B158DRAFT_2432 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) — —
Paraburkholderia sabiae LMG 24235 0.31 QEN71_RS02450 5-(carboxyamino)imidazole ribonucleotide synthase 0.15 QEN71_RS04085 3-phosphoshikimate 1-carboxyvinyltransferase 0.63 13
Paraburkholderia bryophila 376MFSha3.1 0.31 H281DRAFT_04185 5-(carboxyamino)imidazole ribonucleotide synthase 0.15 H281DRAFT_03922 3-phosphoshikimate 1-carboxyvinyltransferase — —
Shewanella loihica PV-4 0.31 Shew_1249 phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) 0.17 Shew_1952 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) low > 60
Paraburkholderia graminis OAS925 0.30 ABIE53_003423 5-(carboxyamino)imidazole ribonucleotide synthase 0.14 ABIE53_003154 3-phosphoshikimate 1-carboxyvinyltransferase — —
Burkholderia phytofirmans PsJN 0.30 BPHYT_RS16245 phosphoribosylaminoimidazole carboxylase 0.16 BPHYT_RS14895 3-phosphoshikimate 1-carboxyvinyltransferase 0.76 20
Mycobacterium tuberculosis H37Rv 0.28 Rv3276c Probable phosphoribosylaminoimidazole carboxylase ATPase subunit PurK (air carboxylase) (AIRC) 0.12 Rv3227 3-phosphoshikimate 1-carboxyvinyltransferase AroA (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) — —
Synechococcus elongatus PCC 7942 0.28 Synpcc7942_1428 purK phosphoribosylaminoimidazole carboxylase ATPase subunit 0.40 Synpcc7942_0232 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Cupriavidus basilensis FW507-4G11 0.28 RR42_RS03230 phosphoribosylaminoimidazole carboxylase 0.14 RR42_RS04475 3-phosphoshikimate 1-carboxyvinyltransferase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.27 Echvi_0884 phosphoribosylaminoimidazole carboxylase, PurK protein 0.09 Echvi_0122 5-enolpyruvylshikimate-3-phosphate synthase — —
Rahnella sp. WP5 0.27 EX31_RS22620 5-(carboxyamino)imidazole ribonucleotide synthase 0.18 EX31_RS18250 3-phosphoshikimate 1-carboxyvinyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.27 GFF4438 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.15 GFF3665 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) low > 78
Enterobacter asburiae PDN3 0.27 EX28DRAFT_2460 phosphoribosylaminoimidazole carboxylase, PurK protein 0.15 EX28DRAFT_2027 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) — —
Escherichia coli ECRC62 0.27 BNILDI_22260 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.15 BNILDI_20300 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 75
Serratia liquefaciens MT49 0.27 IAI46_05370 5-(carboxyamino)imidazole ribonucleotide synthase 0.17 IAI46_08640 3-phosphoshikimate 1-carboxyvinyltransferase 0.71 38
Bifidobacterium breve UCC2003 0.27 BBR_RS13300 5-(carboxyamino)imidazole ribonucleotide synthase 0.11 BBR_RS14370 3-phosphoshikimate 1-carboxyvinyltransferase 0.48 2
Klebsiella michiganensis M5al 0.27 BWI76_RS07065 5-(carboxyamino)imidazole ribonucleotide synthase 0.16 BWI76_RS09760 3-phosphoshikimate 1-carboxyvinyltransferase 0.72 59
Escherichia coli ECOR38 0.27 HEPCGN_06480 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.15 HEPCGN_23035 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 0.71 48
Pedobacter sp. GW460-11-11-14-LB5 0.27 CA265_RS07745 5-(carboxyamino)imidazole ribonucleotide synthase 0.11 CA265_RS11640 3-phosphoshikimate 1-carboxyvinyltransferase — —
Escherichia coli BL21 0.27 ECD_00472 N5-carboxyaminoimidazole ribonucleotide synthase 0.15 ECD_00912 5-enolpyruvylshikimate-3-phosphate synthetase 0.65 22
Escherichia coli Nissle 1917 0.27 ECOLIN_RS03025 5-(carboxyamino)imidazole ribonucleotide synthase 0.15 ECOLIN_RS04810 3-phosphoshikimate 1-carboxyvinyltransferase low > 55
Escherichia coli ECOR27 0.26 NOLOHH_00830 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.15 NOLOHH_22045 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 0.76 52
Escherichia coli BW25113 0.26 b0522 purK phosphoribosylaminoimidazole carboxylase (NCBI) 0.15 b0908 aroA 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) 0.83 20
Escherichia fergusonii Becca 0.26 EFB2_03540 N5-carboxyaminoimidazole ribonucleotide synthase 0.15 EFB2_03156 3-phosphoshikimate 1-carboxyvinyltransferase low > 86
Escherichia coli ECRC100 0.26 OKFHMN_07840 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.15 OKFHMN_05485 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 80
Escherichia coli ECRC101 0.26 MCAODC_27060 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.15 MCAODC_24875 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 87
Escherichia coli ECRC99 0.26 KEDOAH_20130 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.15 KEDOAH_22250 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Escherichia coli ECRC102 0.26 NIAGMN_05895 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.15 NIAGMN_03205 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Escherichia coli ECRC98 0.26 JDDGAC_11490 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.15 JDDGAC_09095 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.26 OHPLBJKB_03159 N5-carboxyaminoimidazole ribonucleotide synthase 0.15 OHPLBJKB_02760 3-phosphoshikimate 1-carboxyvinyltransferase low > 73
Enterobacter sp. TBS_079 0.26 MPMX20_01097 N5-carboxyaminoimidazole ribonucleotide synthase 0.15 MPMX20_01567 3-phosphoshikimate 1-carboxyvinyltransferase 0.81 28
Ralstonia solanacearum GMI1000 0.26 RS_RS02885 5-(carboxyamino)imidazole ribonucleotide synthase 0.17 RS_RS04510 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.26 CA264_12600 5-(carboxyamino)imidazole ribonucleotide synthase 0.10 CA264_13100 3-phosphoshikimate 1-carboxyvinyltransferase low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.26 ABZR88_RS09290 5-(carboxyamino)imidazole ribonucleotide synthase 0.12 ABZR88_RS07000 3-phosphoshikimate 1-carboxyvinyltransferase — —
Ralstonia sp. UNC404CL21Col 0.26 ABZR87_RS08090 5-(carboxyamino)imidazole ribonucleotide synthase 0.16 ABZR87_RS09465 3-phosphoshikimate 1-carboxyvinyltransferase — —
Dickeya dadantii 3937 0.26 DDA3937_RS15110 5-(carboxyamino)imidazole ribonucleotide synthase 0.16 DDA3937_RS09675 3-phosphoshikimate 1-carboxyvinyltransferase — —
Ralstonia solanacearum IBSBF1503 0.25 RALBFv3_RS12200 5-(carboxyamino)imidazole ribonucleotide synthase 0.17 RALBFv3_RS13775 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pantoea sp. MT58 0.25 IAI47_14355 5-(carboxyamino)imidazole ribonucleotide synthase 0.16 IAI47_12860 3-phosphoshikimate 1-carboxyvinyltransferase — —
Ralstonia solanacearum UW163 0.25 UW163_RS01410 5-(carboxyamino)imidazole ribonucleotide synthase 0.17 UW163_RS16035 3-phosphoshikimate 1-carboxyvinyltransferase — —
Ralstonia solanacearum PSI07 0.25 RPSI07_RS21130 5-(carboxyamino)imidazole ribonucleotide synthase 0.17 RPSI07_RS19695 3-phosphoshikimate 1-carboxyvinyltransferase — —
Dickeya dianthicola 67-19 0.25 HGI48_RS15190 5-(carboxyamino)imidazole ribonucleotide synthase 0.16 HGI48_RS09685 3-phosphoshikimate 1-carboxyvinyltransferase — —
Dickeya dianthicola ME23 0.25 DZA65_RS15995 5-(carboxyamino)imidazole ribonucleotide synthase 0.16 DZA65_RS09995 3-phosphoshikimate 1-carboxyvinyltransferase — —
Shewanella oneidensis MR-1 0.25 SO3555 purK phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI ptt file) 0.17 SO2404 aroA 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI ptt file) 0.83 67
Erwinia tracheiphila SCR3 0.25 LU632_RS15250 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.16 LU632_RS09795 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 74
Shewanella sp. ANA-3 0.24 Shewana3_3156 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) 0.18 Shewana3_1975 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) 0.89 18
Shewanella amazonensis SB2B 0.24 Sama_1063 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) 0.16 Sama_1734 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) low > 62
Pectobacterium carotovorum WPP14 0.23 HER17_RS06470 5-(carboxyamino)imidazole ribonucleotide synthase 0.17 HER17_RS12285 3-phosphoshikimate 1-carboxyvinyltransferase 0.93 33

Not shown: 20 genomes with orthologs for Xcc-8004.2012.1 only; 11 genomes with orthologs for Xcc-8004.3281.1 only