Conservation of cofitness between Xcc-8004.5020.1 and Xcc-8004.1962.1 in Xanthomonas campestris pv. campestris strain 8004

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.5020.1 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 1.0 Xcc-8004.1962.1 Phosphoribosylanthranilate isomerase (EC 5.3.1.24) 0.87 14
Lysobacter sp. OAE881 0.57 ABIE51_RS01815 shikimate dehydrogenase 0.48 ABIE51_RS08250 phosphoribosylanthranilate isomerase 0.76 8
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS14985 shikimate dehydrogenase 0.43 ABZR86_RS08010 phosphoribosylanthranilate isomerase 0.94 46
Rhodanobacter denitrificans MT42 0.49 LRK55_RS08360 shikimate dehydrogenase 0.44 LRK55_RS01475 phosphoribosylanthranilate isomerase — —
Rhodanobacter denitrificans FW104-10B01 0.49 LRK54_RS08595 shikimate dehydrogenase 0.44 LRK54_RS01695 phosphoribosylanthranilate isomerase — —
Rhodanobacter sp. FW510-T8 0.46 OKGIIK_15365 aroE shikimate dehydrogenase 0.42 OKGIIK_04835 phosphoribosylanthranilate isomerase low > 52
Pseudomonas fluorescens SBW25 0.39 PFLU_RS00120 shikimate dehydrogenase 0.35 PFLU_RS20540 phosphoribosylanthranilate isomerase — —
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS00120 shikimate dehydrogenase 0.35 PFLU_RS20540 phosphoribosylanthranilate isomerase — —
Pseudomonas simiae WCS417 0.39 PS417_00125 shikimate dehydrogenase 0.35 PS417_18560 N-(5'-phosphoribosyl)anthranilate isomerase — —
Pseudomonas sp. RS175 0.39 PFR28_04655 Shikimate dehydrogenase (NADP(+)) 0.36 PFR28_02816 'N-(5'-phosphoribosyl)anthranilate isomerase' transl_table=11 — —
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_10670 shikimate dehydrogenase 0.37 AO353_20665 N-(5'-phosphoribosyl)anthranilate isomerase 0.75 15
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_11315 shikimate dehydrogenase 0.34 AO356_21440 N-(5'-phosphoribosyl)anthranilate isomerase 0.51 32
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_644 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.36 PfGW456L13_3940 Phosphoribosylanthranilate isomerase (EC 5.3.1.24) 0.73 48
Dechlorosoma suillum PS 0.38 Dsui_0443 shikimate 5-dehydrogenase 0.33 Dsui_3193 phosphoribosylanthranilate isomerase — —
Pseudomonas fluorescens FW300-N2E2 0.38 Pf6N2E2_4130 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.35 Pf6N2E2_71 Phosphoribosylanthranilate isomerase (EC 5.3.1.24) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.37 Psyr_0025 shikimate dehydrogenase 0.30 Psyr_1663 phosphoribosylanthranilate isomerase low > 86
Pseudomonas syringae pv. syringae B728a 0.37 Psyr_0025 shikimate dehydrogenase 0.30 Psyr_1663 phosphoribosylanthranilate isomerase 0.58 33
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS01990 shikimate 5-dehydrogenase 0.33 HSERO_RS16480 N-(5'-phosphoribosyl)anthranilate isomerase 0.76 12
Pseudomonas sp. S08-1 0.37 OH686_12485 Shikimate 5-dehydrogenase I alpha 0.33 OH686_04445 Phosphoribosylanthranilate isomerase low > 80
Pseudomonas putida KT2440 0.37 PP_0074 shikimate 5-dehydrogenase 0.32 PP_1995 N-(5'-phosphoribosyl)anthranilate isomerase — —
Ralstonia solanacearum PSI07 0.36 RPSI07_RS11300 shikimate dehydrogenase 0.29 RPSI07_RS14725 phosphoribosylanthranilate isomerase — —
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS27130 shikimate dehydrogenase 0.35 QEN71_RS17640 phosphoribosylanthranilate isomerase 0.83 6
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_06291 shikimate dehydrogenase (EC 1.1.1.25) 0.34 H281DRAFT_06068 phosphoribosylanthranilate isomerase — —
Ralstonia solanacearum UW163 0.36 UW163_RS07680 shikimate dehydrogenase 0.29 UW163_RS11135 phosphoribosylanthranilate isomerase — —
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS05945 shikimate dehydrogenase 0.29 RALBFv3_RS02590 phosphoribosylanthranilate isomerase — —
Acinetobacter radioresistens SK82 0.36 MPMX26_02748 Shikimate dehydrogenase (NADP(+)) 0.29 MPMX26_02618 N-(5'-phosphoribosyl)anthranilate isomerase low > 36
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS01605 shikimate dehydrogenase 0.30 ABZR87_RS14505 phosphoribosylanthranilate isomerase 0.54 44
Ralstonia solanacearum GMI1000 0.35 RS_RS13890 shikimate dehydrogenase 0.29 RS_RS09970 phosphoribosylanthranilate isomerase — —
Castellaniella sp019104865 MT123 0.35 ABCV34_RS11620 shikimate dehydrogenase 0.34 ABCV34_RS04250 phosphoribosylanthranilate isomerase — —
Pseudomonas stutzeri RCH2 0.35 Psest_0029 shikimate 5-dehydrogenase 0.35 Psest_2584 Phosphoribosylanthranilate isomerase — —
Paraburkholderia graminis OAS925 0.35 ABIE53_003560 shikimate dehydrogenase 0.36 ABIE53_004808 phosphoribosylanthranilate isomerase — —
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS16975 shikimate 5-dehydrogenase 0.34 BPHYT_RS33880 N-(5'-phosphoribosyl)anthranilate isomerase 0.74 13
Marinobacter adhaerens HP15 0.34 HP15_3750 shikimate dehydrogenase 0.34 HP15_1828 phosphoribosylanthranilate isomerase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.34 GFF5226 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.33 GFF3356 Phosphoribosylanthranilate isomerase (EC 5.3.1.24) 0.54 32
Cupriavidus basilensis FW507-4G11 0.30 RR42_RS17645 shikimate dehydrogenase 0.29 RR42_RS14365 N-(5'-phosphoribosyl)anthranilate isomerase 0.74 25
Acidovorax sp. GW101-3H11 0.29 Ac3H11_4044 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.25 Ac3H11_1533 Phosphoribosylanthranilate isomerase (EC 5.3.1.24) 0.97 2
Phaeobacter inhibens DSM 17395 0.26 PGA1_c35150 shikimate dehydrogenase AroE 0.20 PGA1_c04860 N-(5'-phosphoribosyl)anthranilate isomerase TrpF — —
Variovorax sp. OAS795 0.25 ABID97_RS06300 shikimate dehydrogenase 0.29 ABID97_RS08435 phosphoribosylanthranilate isomerase — —
Variovorax sp. SCN45 0.25 GFF4456 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.26 GFF3884 Phosphoribosylanthranilate isomerase (EC 5.3.1.24) — —
Agrobacterium fabrum C58 0.24 Atu0003 shikimate 5-dehydrogenase 0.22 Atu0017 N-(5-phosphoribosyl) anthranilate isomerase — —
Bosea sp. OAE506 0.24 ABIE41_RS04650 shikimate dehydrogenase 0.22 ABIE41_RS04265 phosphoribosylanthranilate isomerase — —
Dinoroseobacter shibae DFL-12 0.24 Dshi_3450 shikimate 5-dehydrogenase (RefSeq) 0.16 Dshi_1029 Phosphoribosylanthranilate isomerase (RefSeq) — —
Sinorhizobium meliloti 1021 0.23 SMc02791 shikimate 5-dehydrogenase 0.23 SMc02767 N-(5'-phosphoribosyl)anthranilate isomerase — —
Desulfovibrio vulgaris Hildenborough JW710 0.23 DVU0115 aroE shikimate 5-dehydrogenase (TIGR) 0.22 DVU0469 trpF-1 N-(5-phosphoribosyl)anthranilate isomerase (TIGR) — —
Rhodopseudomonas palustris CGA009 0.22 TX73_022410 shikimate dehydrogenase 0.24 TX73_000355 phosphoribosylanthranilate isomerase — —
Azospirillum sp. SherDot2 0.22 MPMX19_02560 Shikimate dehydrogenase (NADP(+)) 0.20 MPMX19_02207 N-(5'-phosphoribosyl)anthranilate isomerase — —
Rhizobium sp. OAE497 0.22 ABIE40_RS19250 shikimate dehydrogenase 0.23 ABIE40_RS19330 phosphoribosylanthranilate isomerase — —
Rhodospirillum rubrum S1H 0.22 Rru_A3613 Quinate/Shikimate 5-dehydrogenase (NCBI) 0.24 Rru_A3425 Phosphoribosylanthranilate isomerase (NCBI) — —
Synechococcus elongatus PCC 7942 0.20 Synpcc7942_2467 aroE shikimate 5-dehydrogenase 0.23 Synpcc7942_0408 trpF N-(5'-phosphoribosyl)anthranilate isomerase — —
Methanococcus maripaludis S2 0.20 MMP_RS04855 shikimate dehydrogenase 0.14 MMP_RS05195 phosphoribosylanthranilate isomerase — —
Methanococcus maripaludis JJ 0.19 MMJJ_RS00280 shikimate dehydrogenase 0.14 MMJJ_RS09185 phosphoribosylanthranilate isomerase — —
Magnetospirillum magneticum AMB-1 0.19 AMB_RS23010 shikimate dehydrogenase 0.23 AMB_RS20250 N-(5'-phosphoribosyl)anthranilate isomerase — —
Desulfovibrio vulgaris Miyazaki F 0.19 DvMF_1962 shikimate 5-dehydrogenase (RefSeq) 0.22 DvMF_1742 Phosphoribosylanthranilate isomerase (RefSeq) — —
Caulobacter crescentus NA1000 Δfur 0.19 CCNA_00003 shikimate 5-dehydrogenase 0.19 CCNA_03659 N-(5'-phosphoribosyl)anthranilate isomerase low > 67
Caulobacter crescentus NA1000 0.19 CCNA_00003 shikimate dehydrogenase (EC 1.1.1.25) (from data) 0.19 CCNA_03659 N-(5'-phosphoribosyl)anthranilate isomerase 0.95 2
Brevundimonas sp. GW460-12-10-14-LB2 0.18 A4249_RS13660 shikimate dehydrogenase 0.25 A4249_RS11335 phosphoribosylanthranilate isomerase — —
Azospirillum brasilense Sp245 0.17 AZOBR_RS01765 shikimate 5-dehydrogenase 0.20 AZOBR_RS03140 N-(5'-phosphoribosyl)anthranilate isomerase — —
Sphingomonas koreensis DSMZ 15582 0.17 Ga0059261_2194 shikimate dehydrogenase (EC 1.1.1.25) (from data) 0.16 Ga0059261_0237 phosphoribosylanthranilate isomerase (EC 5.3.1.24) 0.94 4
Echinicola vietnamensis KMM 6221, DSM 17526 0.13 Echvi_1145 Shikimate 5-dehydrogenase 0.20 Echvi_2509 Phosphoribosylanthranilate isomerase — —
Bacteroides ovatus ATCC 8483 0.12 BACOVA_05065 putative shikimate dehydrogenase 0.18 BACOVA_03784 N-(5'phosphoribosyl)anthranilate isomerase — —

Not shown: 35 genomes with orthologs for Xcc-8004.5020.1 only; 9 genomes with orthologs for Xcc-8004.1962.1 only