Conservation of cofitness between Xcc-8004.4046.1 and Xcc-8004.1680.1 in Xanthomonas campestris pv. campestris strain 8004

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.4046.1 ATP-dependent protease La (EC 3.4.21.53) Type I 1.0 Xcc-8004.1680.1 FIG006611: nucleotidyltransferase 0.63 5
Lysobacter sp. OAE881 0.82 ABIE51_RS14145 endopeptidase La 0.62 ABIE51_RS15870 N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU low > 62
Dyella japonica UNC79MFTsu3.2 0.74 ABZR86_RS07320 endopeptidase La 0.46 ABZR86_RS09505 N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU low > 74
Rhodanobacter denitrificans MT42 0.73 LRK55_RS16460 endopeptidase La 0.57 LRK55_RS02860 nucleotidyltransferase family protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.73 LRK54_RS16735 endopeptidase La 0.59 LRK54_RS03110 nucleotidyltransferase family protein 0.59 37
Shewanella loihica PV-4 0.66 Shew_2506 ATP-dependent protease La (RefSeq) 0.41 Shew_0884 nucleotidyl transferase (RefSeq) — —
Shewanella oneidensis MR-1 0.65 SO1796 lon ATP-dependent protease La (NCBI ptt file) 0.39 SO3634 nucleotidyltransferase family protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.65 Shewana3_2659 Lon-A peptidase (RefSeq) 0.39 Shewana3_3204 nucleotidyl transferase (RefSeq) — —
Shewanella amazonensis SB2B 0.65 Sama_1226 endopeptidase La (RefSeq) 0.43 Sama_2814 nucleotidyl transferase (RefSeq) low > 62
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_01740 DNA-binding protein 0.44 AO356_14360 mannose-1-phosphate guanylyltransferase low > 104
Pseudomonas stutzeri RCH2 0.65 Psest_2285 ATP-dependent protease La 0.45 Psest_3663 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) — —
Ralstonia solanacearum GMI1000 0.65 RS_RS08655 endopeptidase La 0.38 RS_RS02545 nucleotidyltransferase family protein — —
Ralstonia solanacearum PSI07 0.65 RPSI07_RS16135 endopeptidase La 0.39 RPSI07_RS21495 nucleotidyltransferase family protein — —
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_2216 ATP-dependent protease La (EC 3.4.21.53) Type I 0.45 Pf6N2E2_4810 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) — —
Ralstonia solanacearum IBSBF1503 0.65 RALBFv3_RS01340 endopeptidase La 0.38 RALBFv3_RS11720 nucleotidyltransferase family protein — —
Ralstonia solanacearum UW163 0.65 UW163_RS14650 endopeptidase La 0.38 UW163_RS01865 nucleotidyltransferase family protein — —
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS12785 endopeptidase La 0.39 ABZR87_RS07675 N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU low > 80
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_20185 DNA-binding protein 0.44 AO353_07290 mannose-1-phosphate guanylyltransferase low > 101
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_3947 ATP-dependent protease La (EC 3.4.21.53) Type I 0.43 Pf1N1B4_2533 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) — —
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_2554 ATP-dependent protease La (EC 3.4.21.53) Type I 0.43 PfGW456L13_1205 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) low > 87
Pseudomonas fluorescens SBW25 0.64 PFLU_RS19160 endopeptidase La 0.43 PFLU_RS27440 nucleotidyltransferase family protein 0.58 107
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS19160 endopeptidase La 0.43 PFLU_RS27440 nucleotidyltransferase family protein low > 109
Pseudomonas sp. RS175 0.64 PFR28_01230 Lon protease 0.45 PFR28_04059 N-acetylmuramate alpha-1-phosphate uridylyltransferase low > 88
Pseudomonas simiae WCS417 0.64 PS417_17225 DNA-binding protein 0.44 PS417_25785 mannose-1-phosphate guanylyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_1749 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 0.45 Psyr_4622 Nucleotidyl transferase low > 86
Dechlorosoma suillum PS 0.64 Dsui_2198 ATP-dependent protease La 0.43 Dsui_1589 Nucleoside-diphosphate-sugar pyrophosphorylase family protein low > 51
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_1749 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 0.45 Psyr_4622 Nucleotidyl transferase 0.42 30
Pseudomonas sp. S08-1 0.64 OH686_03635 endopeptidase La 0.46 OH686_15065 Nucleotidyl transferase putative low > 80
Herbaspirillum seropedicae SmR1 0.64 HSERO_RS12905 peptidase 0.35 HSERO_RS03515 mannose-1-phosphate guanylyltransferase — —
Pseudomonas putida KT2440 0.64 PP_2302 DNA-binding, ATP-dependent protease 0.50 PP_0406 Nucleotidyltransferase family protein low > 96
Marinobacter adhaerens HP15 0.63 HP15_2183 DNA-binding ATP-dependent protease La 0.41 HP15_3283 nucleotidyltransferase family protein — —
Kangiella aquimarina DSM 16071 0.63 B158DRAFT_1038 ATP-dependent protease La 0.43 B158DRAFT_0793 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) low > 40
Paraburkholderia sabiae LMG 24235 0.63 QEN71_RS21975 endopeptidase La 0.35 QEN71_RS02105 nucleotidyltransferase family protein low > 153
Burkholderia phytofirmans PsJN 0.63 BPHYT_RS09460 peptidase 0.37 BPHYT_RS03280 mannose-1-phosphate guanylyltransferase — —
Cupriavidus basilensis FW507-4G11 0.63 RR42_RS09030 DNA-binding protein 0.38 RR42_RS02750 mannose-1-phosphate guanylyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.63 H281DRAFT_00898 ATP-dependent proteinase. Serine peptidase. MEROPS family S16 0.36 H281DRAFT_04635 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) — —
Azospirillum brasilense Sp245 0.62 AZOBR_RS07145 peptidase 0.21 AZOBR_RS00585 mannose-1-phosphate guanylyltransferase low > 97
Azospirillum sp. SherDot2 0.62 MPMX19_01545 Lon protease 0.20 MPMX19_02724 N-acetylmuramate alpha-1-phosphate uridylyltransferase low > 112
Acidovorax sp. GW101-3H11 0.62 Ac3H11_937 ATP-dependent protease La (EC 3.4.21.53) Type I 0.32 Ac3H11_651 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF4044 ATP-dependent protease La (EC 3.4.21.53) Type I 0.29 GFF2486 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) — —
Variovorax sp. OAS795 0.61 ABID97_RS17590 endopeptidase La 0.30 ABID97_RS02455 nucleotidyltransferase family protein 0.69 9
Castellaniella sp019104865 MT123 0.61 ABCV34_RS05125 endopeptidase La 0.43 ABCV34_RS09510 N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU — —
Paraburkholderia graminis OAS925 0.61 ABIE53_002117 ATP-dependent Lon protease 0.33 ABIE53_000795 MurNAc alpha-1-phosphate uridylyltransferase low > 113
Rhodospirillum rubrum S1H 0.61 Rru_A1552 Peptidase S16, ATP-dependent protease La (NCBI) 0.21 Rru_A3436 Nucleotidyl transferase (NCBI) — —
Magnetospirillum magneticum AMB-1 0.60 AMB_RS14035 endopeptidase La 0.19 AMB_RS21470 nucleotidyltransferase family protein — —
Variovorax sp. SCN45 0.60 GFF487 ATP-dependent protease La (EC 3.4.21.53) Type I 0.32 GFF7178 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) low > 127
Caulobacter crescentus NA1000 0.60 CCNA_02037 ATP-dependent endopeptidase Lon 0.19 CCNA_03650 mannose-1-phosphate guanyltransferase low > 66
Caulobacter crescentus NA1000 Δfur 0.60 CCNA_02037 ATP-dependent endopeptidase Lon 0.19 CCNA_03650 mannose-1-phosphate guanyltransferase — —
Agrobacterium fabrum C58 0.59 Atu1261 ATP-dependent protease LA 0.17 Atu0025 hypothetical protein — —
Rhodopseudomonas palustris CGA009 0.59 TX73_015345 endopeptidase La 0.23 TX73_000395 nucleotidyltransferase family protein — —
Rhizobium sp. OAE497 0.58 ABIE40_RS07100 endopeptidase La 0.18 ABIE40_RS19370 nucleotidyltransferase family protein — —
Sinorhizobium meliloti 1021 0.58 SMc01905 ATP-dependent protease LA protein 0.17 SMc02758 nucleotidyl transferase — —
Bosea sp. OAE506 0.58 ABIE41_RS18050 endopeptidase La 0.23 ABIE41_RS02715 nucleotidyltransferase family protein — —
Phaeobacter inhibens DSM 17395 0.57 PGA1_c20540 ATP-dependent protease La 0.18 PGA1_c35330 nucleotidyl transferase-like protein — —
Brevundimonas sp. GW460-12-10-14-LB2 0.57 A4249_RS06460 endopeptidase La 0.20 A4249_RS11280 nucleotidyltransferase family protein — —
Dinoroseobacter shibae DFL-12 0.56 Dshi_1777 ATP-dependent protease La (RefSeq) 0.17 Dshi_3436 Nucleotidyl transferase (RefSeq) low > 64
Sphingomonas koreensis DSMZ 15582 0.56 Ga0059261_0102 endopeptidase La 0.23 Ga0059261_4025 Nucleotidyl transferase low > 68
Acinetobacter radioresistens SK82 0.51 MPMX26_02299 Lon protease 0.43 MPMX26_01213 N-acetylmuramate alpha-1-phosphate uridylyltransferase 0.73 27
Bacteroides stercoris CC31F 0.41 HMPREF1181_RS14340 endopeptidase La 0.22 HMPREF1181_RS10550 nucleotidyltransferase family protein low > 56

Not shown: 39 genomes with orthologs for Xcc-8004.4046.1 only; 0 genomes with orthologs for Xcc-8004.1680.1 only