Conservation of cofitness between Xcc-8004.3118.1 and Xcc-8004.1247.1 in Xanthomonas campestris pv. campestris strain 8004

79 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.3118.1 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 1.0 Xcc-8004.1247.1 Cysteine synthase (EC 2.5.1.47) 0.59 10
Lysobacter sp. OAE881 0.79 ABIE51_RS07790 CinA family protein 0.74 ABIE51_RS16995 cysteine synthase A low > 62
Dyella japonica UNC79MFTsu3.2 0.68 ABZR86_RS00655 CinA family protein 0.72 ABZR86_RS05875 cysteine synthase A low > 74
Rhodanobacter denitrificans FW104-10B01 0.67 LRK54_RS14975 CinA family protein 0.69 LRK54_RS00905 cysteine synthase A low > 59
Rhodanobacter denitrificans MT42 0.67 LRK55_RS14690 CinA family protein 0.69 LRK55_RS00680 cysteine synthase A low > 63
Rhodanobacter sp. FW510-T8 0.66 OKGIIK_03735 pncC damage-inducible protein CinA 0.65 OKGIIK_05985 cysK cysteine synthase A low > 52
Dickeya dadantii 3937 0.54 DDA3937_RS16250 nicotinamide-nucleotide amidase 0.35 DDA3937_RS04425 cysteine synthase CysM 0.79 17
Dickeya dianthicola 67-19 0.54 HGI48_RS16360 nicotinamide-nucleotide amidase 0.34 HGI48_RS04400 cysteine synthase CysM low > 71
Dickeya dianthicola ME23 0.53 DZA65_RS17455 nicotinamide-nucleotide amidase 0.35 DZA65_RS04315 cysteine synthase CysM low > 75
Escherichia coli ECOR27 0.52 NOLOHH_12540 pncC nicotinamide-nucleotide amidase 0.37 NOLOHH_13850 cysM cysteine synthase B low > 75
Escherichia coli ECRC62 0.52 BNILDI_11100 pncC nicotinamide-nucleotide amidase 0.37 BNILDI_12715 cysM cysteine synthase B low > 75
Escherichia coli BL21 0.52 ECD_02550 nicotinamide-nucleotide amidohydrolase; NMN amidohydrolase 0.37 ECD_02321 cysteine synthase B (O-acetylserine sulfhydrolase B) low > 61
Marinobacter adhaerens HP15 0.52 HP15_1046 competence damage-inducible protein A 0.35 HP15_3453 cysteine synthase A low > 73
Escherichia coli Nissle 1917 0.52 ECOLIN_RS15065 nicotinamide-nucleotide amidase 0.38 ECOLIN_RS13900 cysteine synthase B — —
Escherichia coli BW25113 0.52 b2700 ygaD competence damage-inducible protein A (NCBI) 0.37 b2421 cysM cysteine synthase B (O-acetylserine sulfhydrolase B) (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_01034 Nicotinamide-nucleotide amidohydrolase PncC 0.37 OHPLBJKB_01302 Cysteine synthase B low > 73
Enterobacter sp. TBS_079 0.52 MPMX20_03581 Nicotinamide-nucleotide amidohydrolase PncC 0.37 MPMX20_03313 Cysteine synthase B — —
Escherichia fergusonii Becca 0.52 EFB2_01224 Nicotinamide-nucleotide amidohydrolase PncC 0.38 EFB2_01456 Cysteine synthase B low > 86
Escherichia coli ECOR38 0.52 HEPCGN_19895 pncC nicotinamide-nucleotide amidase 0.37 HEPCGN_21345 cysM cysteine synthase B low > 87
Escherichia coli ECRC99 0.52 KEDOAH_07435 pncC nicotinamide-nucleotide amidase 0.37 KEDOAH_06050 cysM cysteine synthase B — —
Escherichia coli ECRC98 0.52 JDDGAC_24365 pncC nicotinamide-nucleotide amidase 0.37 JDDGAC_26120 cysM cysteine synthase B low > 86
Escherichia coli ECRC100 0.52 OKFHMN_20700 pncC nicotinamide-nucleotide amidase 0.37 OKFHMN_22170 cysM cysteine synthase B low > 80
Escherichia coli ECRC101 0.52 MCAODC_11225 pncC nicotinamide-nucleotide amidase 0.37 MCAODC_12700 cysM cysteine synthase B low > 87
Enterobacter asburiae PDN3 0.52 EX28DRAFT_2786 amidohydrolase, PncC family 0.37 EX28DRAFT_0209 cysteine synthase B — —
Escherichia coli ECRC102 0.52 NIAGMN_18470 pncC nicotinamide-nucleotide amidase 0.37 NIAGMN_19940 cysM cysteine synthase B — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.50 GFF4694 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.38 GFF2055 Cysteine synthase (EC 2.5.1.47) low > 78
Klebsiella michiganensis M5al 0.49 BWI76_RS22185 hypothetical protein 0.37 BWI76_RS20685 cysteine synthase B — —
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS27055 CinA family protein 0.36 QEN71_RS04135 cysteine synthase CysM — —
Serratia liquefaciens MT49 0.47 IAI46_03835 nicotinamide-nucleotide amidase 0.34 IAI46_18445 cysteine synthase A low > 86
Pectobacterium carotovorum WPP14 0.46 HER17_RS05040 nicotinamide-nucleotide amidase 0.34 HER17_RS17210 cysteine synthase CysM low > 75
Erwinia tracheiphila SCR3 0.46 LU632_RS15740 pncC nicotinamide-nucleotide amidase 0.35 LU632_RS06625 cysK cysteine synthase A 0.71 2
Vibrio cholerae E7946 ATCC 55056 0.46 CSW01_02870 CinA family protein 0.35 CSW01_02845 cysteine synthase CysM low > 62
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_1377 CinA, C-terminal 0.34 Psyr_1583 cysteine synthase low > 86
Pseudomonas stutzeri RCH2 0.46 Psest_2873 competence/damage-inducible protein CinA C-terminal domain 0.34 Psest_1638 cysteine synthase B — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_1377 CinA, C-terminal 0.34 Psyr_1583 cysteine synthase low > 86
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS16895 competence damage-inducible protein A 0.34 BPHYT_RS14845 cysteine synthase low > 109
Pantoea sp. MT58 0.45 IAI47_04295 nicotinamide-nucleotide amidase 0.35 IAI47_05440 cysteine synthase A low > 76
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_06305 nicotinamide-nucleotide amidase 0.37 H281DRAFT_03911 cysteine synthase — —
Paraburkholderia graminis OAS925 0.44 ABIE53_003546 nicotinamide-nucleotide amidase 0.35 ABIE53_003144 cysteine synthase B low > 113
Pseudomonas sp. S08-1 0.44 OH686_18200 Nicotinamide-nucleotide amidase 0.36 OH686_05215 cysteine synthase A low > 80
Desulfovibrio vulgaris Hildenborough JW710 0.44 DVU1033 cinA competence/damage-inducible protein CinA protein, truncation (TIGR) 0.36 DVU0663 cysK cysteine synthase A (TIGR) — —
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS05880 CinA family protein 0.34 PFLU_RS07585 cysteine synthase A low > 109
Pseudomonas fluorescens SBW25 0.44 PFLU_RS05880 CinA family protein 0.34 PFLU_RS07585 cysteine synthase A low > 109
Pseudomonas simiae WCS417 0.44 PS417_05810 damage-inducible protein CinA 0.34 PS417_07505 cysteine synthase low > 88
Alteromonas macleodii MIT1002 0.44 MIT1002_00954 Nicotinamide-nucleotide amidohydrolase PncC 0.32 MIT1002_02237 Cysteine synthase A — —
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_16800 damage-inducible protein CinA 0.35 AO353_18020 cysteine synthase low > 101
Dechlorosoma suillum PS 0.43 Dsui_0710 competence/damage-inducible protein CinA-like protein 0.37 Dsui_3208 cysteine synthase A 0.79 18
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS01580 CinA family protein 0.35 ABZR87_RS09515 cysteine synthase CysM low > 80
Rahnella sp. WP5 0.43 EX31_RS07805 nicotinamide-nucleotide amidase 0.35 EX31_RS20205 cysteine synthase CysM 0.61 31
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF3091 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.37 GFF4578 Cysteine synthase (EC 2.5.1.47) low > 90
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS05915 CinA family protein 0.36 RALBFv3_RS13825 cysteine synthase CysM — —
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_4669 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.34 PfGW456L13_4472 Cysteine synthase (EC 2.5.1.47) low > 87
Ralstonia solanacearum UW163 0.42 UW163_RS07710 CinA family protein 0.36 UW163_RS15985 cysteine synthase CysM — —
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS17625 damage-inducible protein CinA 0.36 RR42_RS21960 cysteine synthase low > 128
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS16840 competence damage-inducible protein A 0.35 HSERO_RS04915 cysteine synthase — —
Pseudomonas fluorescens FW300-N1B4 0.42 Pf1N1B4_3142 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.35 Pf1N1B4_3374 Cysteine synthase (EC 2.5.1.47) low > 87
Ralstonia solanacearum PSI07 0.42 RPSI07_RS11330 CinA family protein 0.36 RPSI07_RS19645 cysteine synthase CysM — —
Pseudomonas fluorescens FW300-N2C3 0.42 AO356_05675 damage-inducible protein CinA 0.34 AO356_04305 cysteine synthase low > 104
Ralstonia solanacearum GMI1000 0.42 RS_RS13860 CinA family protein 0.36 RS_RS04560 cysteine synthase CysM — —
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_2994 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.34 Pf6N2E2_2700 Cysteine synthase (EC 2.5.1.47) low > 103
Azospirillum brasilense Sp245 0.41 AZOBR_RS14405 competence damage-inducible protein A 0.37 AZOBR_RS01080 cysteine synthase — —
Pseudomonas sp. RS175 0.41 PFR28_00471 Nicotinamide-nucleotide amidohydrolase PncC 0.35 PFR28_00734 Cysteine synthase A low > 88
Pseudomonas putida KT2440 0.41 PP_1628 NMN amidohydrolase 0.35 PP_4571 cysteine synthase A low > 96
Azospirillum sp. SherDot2 0.40 MPMX19_01107 Nicotinamide-nucleotide amidohydrolase PncC 0.34 MPMX19_00237 Cysteine synthase low > 112
Phocaeicola vulgatus CL09T03C04 0.40 HMPREF1058_RS04115 CinA family protein 0.39 HMPREF1058_RS02875 cysteine synthase A low > 67
Phocaeicola dorei CL03T12C01 0.40 ABI39_RS17105 CinA family protein 0.40 ABI39_RS02185 cysteine synthase A low > 72
Magnetospirillum magneticum AMB-1 0.40 AMB_RS12830 CinA family protein 0.35 AMB_RS01005 cysteine synthase A — —
Sinorhizobium meliloti 1021 0.39 SMc01039 hypothetical protein 0.34 SMc00421 O-acetylserine sulfhydrylase A low > 103
Acidovorax sp. GW101-3H11 0.39 Ac3H11_738 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.37 Ac3H11_1975 Cysteine synthase (EC 2.5.1.47) low > 79
Bacteroides stercoris CC31F 0.38 HMPREF1181_RS16315 CinA family protein 0.39 HMPREF1181_RS14120 cysteine synthase A — —
Rhizobium sp. OAE497 0.37 ABIE40_RS09070 CinA family protein 0.31 ABIE40_RS01415 cysteine synthase A low > 107
Kangiella aquimarina DSM 16071 0.37 B158DRAFT_1530 competence/damage-inducible protein CinA C-terminal domain 0.66 B158DRAFT_2456 cysteine synthase A low > 40
Variovorax sp. SCN45 0.37 GFF6273 Nicotinamide-nucleotide amidase (EC 3.5.1.42) 0.38 GFF4549 Cysteine synthase (EC 2.5.1.47) low > 127
Agrobacterium fabrum C58 0.36 Atu1442 competence/damage-inducible protein CinA 0.33 Atu0312 cysteine synthase low > 89
Parabacteroides merdae CL09T00C40 0.35 HMPREF1078_RS09765 CinA family protein 0.40 HMPREF1078_RS08075 cysteine synthase A — —
Brevundimonas sp. GW460-12-10-14-LB2 0.35 A4249_RS04795 CinA family protein 0.36 A4249_RS10255 cysteine synthase A low > 48
Castellaniella sp019104865 MT123 0.33 ABCV34_RS10110 CinA family protein 0.31 ABCV34_RS07055 cysteine synthase CysM — —
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_01811 competence/damage-inducible protein CinA 0.33 CCNA_03740 cysteine synthase low > 67
Caulobacter crescentus NA1000 0.33 CCNA_01811 competence/damage-inducible protein CinA 0.33 CCNA_03740 cysteine synthase low > 66
Bosea sp. OAE506 0.26 ABIE41_RS16805 CinA family protein 0.34 ABIE41_RS03545 cysteine synthase A 0.23 29

Not shown: 1 genomes with orthologs for Xcc-8004.3118.1 only; 18 genomes with orthologs for Xcc-8004.1247.1 only