| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Rhodopseudomonas palustris CGA009 | 1.0 | TX73_015860 | | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | 1.0 | TX73_003800 | | formate dehydrogenase accessory sulfurtransferase FdhD | 0.53 | 9 |
| Bosea sp. OAE506 | 0.67 | ABIE41_RS17730 | | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | 0.34 | ABIE41_RS15275 | | formate dehydrogenase accessory sulfurtransferase FdhD | low | > 77 |
| Agrobacterium fabrum C58 | 0.62 | Atu1103 | | rRNA-adenine N6,N6-dimethyltransferase | 0.48 | Atu2619 | | NAD-dependent formate dehydrogenase, C subunit protein | low | > 89 |
| Rhizobium sp. OAE497 | 0.61 | ABIE40_RS06390 | | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | 0.50 | ABIE40_RS17840 | | formate dehydrogenase accessory sulfurtransferase FdhD | low | > 107 |
| Sinorhizobium meliloti 1021 | 0.60 | SMc00579 | | dimethyladenosine transferase | 0.50 | SMc03085 | | formate dehydrogenase accessory protein | low | > 103 |
| Azospirillum brasilense Sp245 | 0.54 | AZOBR_RS16340 | | 16S rRNA methyltransferase | 0.38 | AZOBR_RS18415 | | formate dehydrogenase accessory protein FdhD | low | > 97 |
| Azospirillum sp. SherDot2 | 0.50 | MPMX19_01514 | | Ribosomal RNA small subunit methyltransferase A | 0.40 | MPMX19_03504 | | Sulfur carrier protein FdhD | — | — |
| Magnetospirillum magneticum AMB-1 | 0.50 | AMB_RS18820 | | dimethyladenosine transferase | 0.18 | AMB_RS10185 | | sulfurtransferase FdhD | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.49 | Ga0059261_0879 | | ribosomal RNA small subunit methyltransferase A | 0.33 | Ga0059261_3871 | | formate dehydrogenase family accessory protein FdhD | low | > 68 |
| Caulobacter crescentus NA1000 Δfur | 0.49 | CCNA_01757 | | dimethyladenosine transferase | 0.30 | CCNA_01300 | | formate dehydrogenase accessory protein fdhD | low | > 67 |
| Caulobacter crescentus NA1000 | 0.49 | CCNA_01757 | | dimethyladenosine transferase | 0.30 | CCNA_01300 | | formate dehydrogenase accessory protein fdhD | low | > 66 |
| Herbaspirillum seropedicae SmR1 | 0.31 | HSERO_RS03540 | | dimethyladenosine transferase | 0.42 | HSERO_RS07435 | | formate dehydrogenase accessory protein FdhD | low | > 78 |
| Shewanella loihica PV-4 | 0.29 | Shew_0879 | ksgA | dimethyladenosine transferase (RefSeq) | 0.14 | Shew_0053 | | formate dehydrogenase, subunit FdhD (RefSeq) | — | — |
| Shewanella sp. ANA-3 | 0.29 | Shewana3_3209 | ksgA | dimethyladenosine transferase (RefSeq) | 0.31 | Shewana3_0108 | | formate dehydrogenase accessory protein (RefSeq) | — | — |
| Shewanella amazonensis SB2B | 0.29 | Sama_2819 | ksgA | dimethyladenosine transferase (RefSeq) | 0.13 | Sama_3619 | | formate dehydrogenase accessory protein FdhD, putative (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.28 | SO3639 | ksgA | dimethyladenosine transferase (NCBI ptt file) | 0.30 | SO0107 | fdhD | formate dehydrogenase accessory protein FdhD (NCBI ptt file) | low | > 76 |
| Cupriavidus basilensis FW507-4G11 | 0.28 | RR42_RS02785 | | dimethyladenosine transferase | 0.41 | RR42_RS03765 | | formate dehydrogenase | low | > 128 |
| Pseudomonas simiae WCS417 | 0.28 | PS417_25810 | | ribosomal RNA small subunit methyltransferase A | 0.29 | PS417_01270 | | iron ABC transporter substrate-binding protein | — | — |
| Pseudomonas fluorescens SBW25 | 0.28 | PFLU_RS27465 | | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | 0.28 | PFLU_RS01365 | | formate dehydrogenase accessory sulfurtransferase FdhD | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.28 | PFLU_RS27465 | | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | 0.28 | PFLU_RS01365 | | formate dehydrogenase accessory sulfurtransferase FdhD | low | > 109 |
| Escherichia coli BL21 | 0.27 | ECD_00055 | | 16S rRNA m(6)A1518, m(6)A1519 dimethyltransferase, SAM-dependent | 0.34 | ECD_03780 | | formate dehydrogenase formation protein | — | — |
| Escherichia coli ECRC98 | 0.27 | JDDGAC_14430 | rsmA | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA | 0.34 | JDDGAC_17575 | fdhD | formate dehydrogenase accessory sulfurtransferase FdhD | low | > 86 |
| Escherichia coli ECRC102 | 0.27 | NIAGMN_08685 | rsmA | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA | 0.34 | NIAGMN_11705 | fdhD | formate dehydrogenase accessory sulfurtransferase FdhD | — | — |
| Escherichia coli ECRC101 | 0.27 | MCAODC_01350 | rsmA | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA | 0.34 | MCAODC_04450 | fdhD | formate dehydrogenase accessory sulfurtransferase FdhD | low | > 87 |
| Escherichia coli ECOR38 | 0.27 | HEPCGN_08825 | rsmA | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA | 0.34 | HEPCGN_12585 | fdhD | formate dehydrogenase accessory sulfurtransferase FdhD | low | > 87 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.27 | H281DRAFT_04640 | | dimethyladenosine transferase | 0.35 | H281DRAFT_06437 | | FdhD protein | low | > 103 |
| Escherichia coli ECRC100 | 0.27 | OKFHMN_10835 | rsmA | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA | 0.34 | OKFHMN_13950 | fdhD | formate dehydrogenase accessory sulfurtransferase FdhD | — | — |
| Escherichia coli ECRC99 | 0.27 | KEDOAH_17320 | rsmA | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA | 0.34 | KEDOAH_14205 | fdhD | formate dehydrogenase accessory sulfurtransferase FdhD | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.27 | OHPLBJKB_03605 | | Ribosomal RNA small subunit methyltransferase A | 0.34 | OHPLBJKB_04155 | | Sulfur carrier protein FdhD | low | > 73 |
| Escherichia coli ECOR27 | 0.27 | NOLOHH_03180 | rsmA | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA | 0.34 | NOLOHH_06070 | fdhD | formate dehydrogenase accessory sulfurtransferase FdhD | — | — |
| Pseudomonas putida KT2440 | 0.27 | PP_0401 | | Ribosomal RNA small subunit methyltransferase A | 0.30 | PP_0257 | | protein sulfur transferase | low | > 96 |
| Escherichia coli ECRC62 | 0.27 | BNILDI_08425 | rsmA | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA | 0.35 | BNILDI_05455 | fdhD | formate dehydrogenase accessory sulfurtransferase FdhD | low | > 75 |
| Escherichia coli BW25113 | 0.27 | b0051 | ksgA | dimethyladenosine transferase (NCBI) | 0.34 | b3895 | fdhD | formate dehydrogenase accessory protein (NCBI) | low | > 76 |
| Escherichia coli Nissle 1917 | 0.27 | ECOLIN_RS00285 | | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | 0.34 | ECOLIN_RS22460 | | formate dehydrogenase accessory sulfurtransferase FdhD | — | — |
| Escherichia fergusonii Becca | 0.27 | EFB2_03992 | | Ribosomal RNA small subunit methyltransferase A | 0.34 | EFB2_04720 | | Sulfur carrier protein FdhD | low | > 86 |
| Pseudomonas fluorescens FW300-N2E3 | 0.27 | AO353_07315 | | rRNA methyltransferase | 0.31 | AO353_11830 | | formate dehydrogenase family accessory protein FdhD | low | > 101 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.27 | Xcc-8004.4271.1 | | SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) | 0.36 | Xcc-8004.2194.1 | | Formate dehydrogenase chain D (EC 1.2.1.2) | low | > 74 |
| Pseudomonas fluorescens GW456-L13 | 0.27 | PfGW456L13_1200 | | SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) | 0.30 | PfGW456L13_408 | | Formate dehydrogenase chain D (EC 1.2.1.2) | — | — |
| Marinobacter adhaerens HP15 | 0.27 | HP15_3278 | | dimethyladenosine transferase | 0.38 | HP15_4175 | | formate dehydrogenase, subunit FdhD | low | > 73 |
| Ralstonia sp. UNC404CL21Col | 0.27 | ABZR87_RS07710 | | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | 0.34 | ABZR87_RS19685 | | formate dehydrogenase accessory sulfurtransferase FdhD | low | > 80 |
| Pseudomonas fluorescens FW300-N1B4 | 0.27 | Pf1N1B4_2528 | | SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) | 0.30 | Pf1N1B4_1673 | | Formate dehydrogenase chain D (EC 1.2.1.2) | — | — |
| Pseudomonas sp. RS175 | 0.27 | PFR28_04064 | | Ribosomal RNA small subunit methyltransferase A | 0.30 | PFR28_04882 | | Sulfur carrier protein FdhD | low | > 88 |
| Paraburkholderia graminis OAS925 | 0.27 | ABIE53_000800 | | 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase | 0.31 | ABIE53_000787 | | FdhD protein | low | > 113 |
| Pseudomonas fluorescens FW300-N2C3 | 0.27 | AO356_14335 | | rRNA methyltransferase | 0.30 | AO356_10100 | | formate dehydrogenase family accessory protein FdhD | low | > 104 |
| Burkholderia phytofirmans PsJN | 0.27 | BPHYT_RS03305 | | ribosomal RNA small subunit methyltransferase A | 0.32 | BPHYT_RS03240 | | formate dehydrogenase accessory protein FdhD | — | — |
| Klebsiella michiganensis M5al | 0.27 | BWI76_RS04520 | | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase | 0.33 | BWI76_RS00475 | | sulfurtransferase FdhD | — | — |
| Pantoea sp. MT58 | 0.27 | IAI47_16085 | | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | 0.34 | IAI47_18740 | | formate dehydrogenase accessory sulfurtransferase FdhD | low | > 76 |
| Pseudomonas fluorescens FW300-N2E2 | 0.27 | Pf6N2E2_4805 | | SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) | 0.30 | Pf6N2E2_3890 | | Formate dehydrogenase chain D (EC 1.2.1.2) | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.27 | QEN71_RS02130 | | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | 0.31 | QEN71_RS02080 | | formate dehydrogenase accessory sulfurtransferase FdhD | low | > 153 |
| Enterobacter asburiae PDN3 | 0.26 | EX28DRAFT_3645 | | ribosomal RNA small subunit methyltransferase A | 0.35 | EX28DRAFT_4379 | | formate dehydrogenase family accessory protein FdhD | low | > 76 |
| Serratia liquefaciens MT49 | 0.26 | IAI46_03245 | | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | 0.35 | IAI46_00205 | | formate dehydrogenase accessory sulfurtransferase FdhD | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.26 | Psyr_4627 | | dimethyladenosine transferase | 0.28 | Psyr_4945 | | Formate dehydrogenase, subunit FdhD | low | > 86 |
| Lysobacter sp. OAE881 | 0.26 | ABIE51_RS05385 | | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | 0.38 | ABIE51_RS14800 | | formate dehydrogenase accessory sulfurtransferase FdhD | low | > 62 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.26 | GFF190 | | SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) | 0.33 | GFF2254 | | Formate dehydrogenase chain D (EC 1.2.1.2) | low | > 78 |
| Dickeya dadantii 3937 | 0.26 | DDA3937_RS18265 | | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | 0.35 | DDA3937_RS20955 | | formate dehydrogenase accessory sulfurtransferase FdhD | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.26 | HER17_RS02960 | | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | 0.34 | HER17_RS21105 | | formate dehydrogenase accessory sulfurtransferase FdhD | low | > 75 |
| Pseudomonas syringae pv. syringae B728a | 0.26 | Psyr_4627 | | dimethyladenosine transferase | 0.28 | Psyr_4945 | | Formate dehydrogenase, subunit FdhD | low | > 86 |
| Rahnella sp. WP5 | 0.26 | EX31_RS03780 | | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | 0.35 | EX31_RS05780 | | formate dehydrogenase accessory sulfurtransferase FdhD | — | — |
| Dickeya dianthicola 67-19 | 0.26 | HGI48_RS18200 | | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | 0.35 | HGI48_RS00290 | | formate dehydrogenase accessory sulfurtransferase FdhD | — | — |
| Dickeya dianthicola ME23 | 0.26 | DZA65_RS19340 | | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | 0.35 | DZA65_RS00290 | | formate dehydrogenase accessory sulfurtransferase FdhD | — | — |
| Alteromonas macleodii MIT1002 | 0.26 | MIT1002_00781 | | Ribosomal RNA small subunit methyltransferase A | 0.30 | MIT1002_01712 | | formate dehydrogenase accessory protein | low | > 70 |
| Acidovorax sp. GW101-3H11 | 0.26 | Ac3H11_4327 | | SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) | 0.11 | Ac3H11_3797 | | Formate dehydrogenase chain D (EC 1.2.1.2) | — | — |
| Ralstonia solanacearum UW163 | 0.26 | UW163_RS01830 | | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | 0.35 | UW163_RS20380 | | sulfurtransferase FdhD | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.26 | RALBFv3_RS11755 | | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | 0.35 | RALBFv3_RS18750 | | sulfurtransferase FdhD | — | — |
| Enterobacter sp. TBS_079 | 0.26 | MPMX20_00747 | | Ribosomal RNA small subunit methyltransferase A | 0.35 | MPMX20_04574 | | Sulfur carrier protein FdhD | low | > 85 |
| Ralstonia solanacearum GMI1000 | 0.25 | RS_RS02580 | | ribosomal RNA small subunit methyltransferase A | 0.33 | RS_RS22200 | | sulfurtransferase FdhD | — | — |
| Ralstonia solanacearum PSI07 | 0.25 | RPSI07_RS21460 | | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | 0.34 | RPSI07_RS04845 | | sulfurtransferase FdhD | low | > 81 |
| Variovorax sp. OAS795 | 0.24 | ABID97_RS02525 | | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | 0.11 | ABID97_RS07590 | | formate dehydrogenase accessory sulfurtransferase FdhD | low | > 91 |
| Variovorax sp. SCN45 | 0.24 | GFF3251 | | SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) | 0.29 | GFF5642 | | Sulfur carrier protein FdhD | — | — |
| Castellaniella sp019104865 MT123 | 0.24 | ABCV34_RS09490 | | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | 0.30 | ABCV34_RS00240 | | formate dehydrogenase accessory sulfurtransferase FdhD | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.23 | DVU1797 | ksgA | dimethyladenosine transferase (TIGR) | 0.12 | DVU0578 | | formate dehydrogenase accessory protein FdhD, putative (TIGR) | low | > 55 |
| Dyella japonica UNC79MFTsu3.2 | 0.23 | ABZR86_RS11270 | | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | 0.39 | ABZR86_RS03590 | | formate dehydrogenase accessory sulfurtransferase FdhD | low | > 74 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.23 | GFF2466 | | SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) | 0.14 | GFF1188 | | Formate dehydrogenase chain D (EC 1.2.1.2) | low | > 90 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.22 | ABZR88_RS00050 | | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | 0.21 | ABZR88_RS07865 | | formate dehydrogenase accessory sulfurtransferase FdhD | low | > 71 |
| Mycobacterium tuberculosis H37Rv | 0.21 | Rv1010 | | Probable dimethyladenosine transferase KsgA (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA dimethylase) (high level kasugamycin resistance protein KsgA) (kasugamycin dimethyltransferase) | 0.22 | Rv2899c | | Possible FdhD protein homolog | low | > 58 |
Not shown: 27 genomes with orthologs for TX73_015860 only; 2 genomes with orthologs for TX73_003800 only