Conservation of cofitness between QEN71_RS06015 and QEN71_RS22255 in Paraburkholderia sabiae LMG 24235

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS06015 protease modulator HflC 1.0 QEN71_RS22255 5'/3'-nucleotidase SurE 0.79 3
Paraburkholderia graminis OAS925 0.76 ABIE53_002734 membrane protease subunit HflC 0.95 ABIE53_002054 5'-nucleotidase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.71 H281DRAFT_00524 protease FtsH subunit HflC 0.94 H281DRAFT_00840 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase — —
Burkholderia phytofirmans PsJN 0.65 BPHYT_RS12540 membrane protein 0.94 BPHYT_RS09100 stationary phase survival protein SurE — —
Ralstonia solanacearum GMI1000 0.47 RS_RS06125 protease modulator HflC 0.69 RS_RS06030 5'-nucleotidase SurE — —
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS10955 protease modulator HflC 0.70 ABZR87_RS10860 5'/3'-nucleotidase SurE — —
Ralstonia solanacearum PSI07 0.44 RPSI07_RS18060 protease modulator HflC 0.71 RPSI07_RS18155 5'/3'-nucleotidase SurE low > 81
Ralstonia solanacearum UW163 0.44 UW163_RS12780 protease modulator HflC 0.70 UW163_RS12685 5'/3'-nucleotidase SurE — —
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS15315 protease modulator HflC 0.70 RALBFv3_RS15220 5'/3'-nucleotidase SurE — —
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS14760 membrane protein 0.63 HSERO_RS14845 stationary phase survival protein SurE 0.20 51
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS13100 membrane protein 0.61 RR42_RS13200 stationary phase survival protein SurE — —
Acidovorax sp. GW101-3H11 0.39 Ac3H11_1802 HflC protein 0.55 Ac3H11_1784 5-nucleotidase SurE (EC 3.1.3.5) low > 79
Dechlorosoma suillum PS 0.37 Dsui_3134 membrane protease subunit, stomatin/prohibitin 0.56 Dsui_1968 5''/3''-nucleotidase SurE — —
Variovorax sp. OAS795 0.36 ABID97_RS14265 protease modulator HflC 0.57 ABID97_RS10715 5'/3'-nucleotidase SurE low > 91
Variovorax sp. SCN45 0.35 GFF1003 HflC protein 0.57 GFF2845 5'-nucleotidase SurE (EC 3.1.3.5) 0.83 73
Castellaniella sp019104865 MT123 0.33 ABCV34_RS02665 protease modulator HflC 0.62 ABCV34_RS03030 5'/3'-nucleotidase SurE — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF4855 HflC protein 0.60 GFF3879 5-nucleotidase SurE (EC 3.1.3.5) low > 90
Rhodanobacter sp. FW510-T8 0.31 OKGIIK_06645 hflC protease modulator HflC 0.52 OKGIIK_08115 surE 5'/3'-nucleotidase SurE low > 52
Pseudomonas fluorescens FW300-N2E3 0.29 AO353_13160 membrane protease HflC 0.45 AO353_16600 stationary phase survival protein SurE low > 101
Pseudomonas fluorescens GW456-L13 0.29 PfGW456L13_151 HflC protein 0.43 PfGW456L13_4678 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) low > 87
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_3611 HflC protein 0.41 Pf6N2E2_3040 5-nucleotidase SurE (EC 3.1.3.5) low > 103
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_1409 HflC protein 0.44 Pf1N1B4_3112 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_0575 protease FtsH subunit HflC 0.45 Psyr_1371 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase low > 86
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_0575 protease FtsH subunit HflC 0.45 Psyr_1371 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase low > 86
Shewanella amazonensis SB2B 0.28 Sama_3022 hflC protein (RefSeq) 0.52 Sama_1041 surE stationary phase survival protein SurE (RefSeq) low > 62
Marinobacter adhaerens HP15 0.28 HP15_2496 HflC 0.44 HP15_1279 stationary-phase survival protein SurE — —
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_08640 membrane protease HflC 0.41 AO356_05900 stationary phase survival protein SurE low > 104
Pseudomonas sp. S08-1 0.28 OH686_09455 HflC protein 0.47 OH686_18170 5'/3'-nucleotidase SurE low > 80
Pseudomonas fluorescens SBW25 0.28 PFLU_RS02585 protease modulator HflC 0.48 PFLU_RS06415 5'/3'-nucleotidase SurE low > 109
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS02585 protease modulator HflC 0.48 PFLU_RS06415 5'/3'-nucleotidase SurE low > 109
Pantoea sp. MT58 0.27 IAI47_02605 protease modulator HflC 0.43 IAI47_04220 5'/3'-nucleotidase SurE low > 76
Shewanella sp. ANA-3 0.27 Shewana3_0600 HflC protein (RefSeq) 0.52 Shewana3_1121 surE stationary phase survival protein SurE (RefSeq) low > 73
Pseudomonas sp. RS175 0.27 PFR28_05124 Modulator of FtsH protease HflC 0.41 PFR28_00424 '5'-nucleotidase SurE' transl_table=11 low > 88
Rhodanobacter denitrificans MT42 0.27 LRK55_RS00385 protease modulator HflC 0.51 LRK55_RS16375 5'/3'-nucleotidase SurE low > 63
Rhodanobacter denitrificans FW104-10B01 0.27 LRK54_RS00615 protease modulator HflC 0.51 LRK54_RS16650 5'/3'-nucleotidase SurE low > 59
Pseudomonas stutzeri RCH2 0.27 Psest_0686 Membrane protease subunits, stomatin/prohibitin homologs 0.48 Psest_2810 5'/3'-nucleotidase SurE — —
Pseudomonas putida KT2440 0.27 PP_4891 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex 0.46 PP_1620 5'(3')-nucleotidase and polyphosphatase low > 96
Shewanella oneidensis MR-1 0.27 SO0606 hflC hflC protein (NCBI ptt file) 0.51 SO3435 surE stationary-phase survival protein SurE (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.26 Shew_0569 HflC protein (RefSeq) 0.52 Shew_1210 stationary-phase survival protein SurE (RefSeq) low > 60
Enterobacter asburiae PDN3 0.26 EX28DRAFT_3372 HflC protein 0.42 EX28DRAFT_2840 3'-nucleotidase (EC 3.1.3.6)/5'-nucleotidase (EC 3.1.3.5)/exopolyphosphatase (EC 3.6.1.11) 0.67 46
Pseudomonas simiae WCS417 0.26 PS417_02505 membane protease HflC 0.47 PS417_06350 stationary phase survival protein SurE — —
Serratia liquefaciens MT49 0.26 IAI46_01640 protease modulator HflC 0.43 IAI46_03775 5'/3'-nucleotidase SurE low > 86
Lysobacter sp. OAE881 0.26 ABIE51_RS06555 protease modulator HflC 0.45 ABIE51_RS06485 5'/3'-nucleotidase SurE low > 62
Erwinia tracheiphila SCR3 0.26 LU632_RS02070 hflC protease modulator HflC 0.42 LU632_RS06465 surE 5'/3'-nucleotidase SurE low > 74
Escherichia coli ECOR38 0.25 HEPCGN_10470 hflC protease modulator HflC 0.44 HEPCGN_19660 surE 5'/3'-nucleotidase SurE low > 87
Escherichia coli ECRC102 0.25 NIAGMN_10090 hflC protease modulator HflC 0.44 NIAGMN_18250 surE 5'/3'-nucleotidase SurE — —
Escherichia coli ECRC98 0.25 JDDGAC_15880 hflC protease modulator HflC 0.44 JDDGAC_24145 surE 5'/3'-nucleotidase SurE low > 86
Escherichia fergusonii Becca 0.25 EFB2_04360 Modulator of FtsH protease HflC 0.44 EFB2_01166 5'/3'-nucleotidase SurE low > 86
Escherichia coli ECRC101 0.25 MCAODC_02755 hflC protease modulator HflC 0.44 MCAODC_11005 surE 5'/3'-nucleotidase SurE low > 87
Escherichia coli ECRC100 0.25 OKFHMN_12240 hflC protease modulator HflC 0.44 OKFHMN_20480 surE 5'/3'-nucleotidase SurE low > 80
Escherichia coli BL21 0.25 ECD_04042 HflB protease modulator specific for phage lambda cII repressor 0.44 ECD_02594 broad specificity 5'(3')-nucleotidase and polyphosphatase low > 61
Enterobacter sp. TBS_079 0.25 MPMX20_00456 Modulator of FtsH protease HflC 0.41 MPMX20_03630 5'/3'-nucleotidase SurE low > 85
Escherichia coli ECRC62 0.25 BNILDI_06985 hflC protease modulator HflC 0.44 BNILDI_10845 surE 5'/3'-nucleotidase SurE low > 75
Escherichia coli Nissle 1917 0.25 ECOLIN_RS24245 protease modulator HflC 0.44 ECOLIN_RS15345 5'/3'-nucleotidase SurE — —
Escherichia coli BW25113 0.25 b4175 hflC modulator for HflB protease specific for phage lambda cII repressor (NCBI) 0.44 b2744 surE acid phosphatase (NCBI) low > 76
Escherichia coli ECOR27 0.25 NOLOHH_04505 hflC protease modulator HflC 0.44 NOLOHH_12295 surE 5'/3'-nucleotidase SurE low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.25 OHPLBJKB_03867 Modulator of FtsH protease HflC 0.44 OHPLBJKB_00989 '5'/3'-nucleotidase SurE' transl_table=11 low > 73
Escherichia coli ECRC99 0.25 KEDOAH_15915 hflC protease modulator HflC 0.44 KEDOAH_07660 surE 5'/3'-nucleotidase SurE — —
Klebsiella michiganensis M5al 0.25 BWI76_RS02550 protease modulator HflC 0.43 BWI76_RS22660 5'/3'-nucleotidase SurE low > 92
Dyella japonica UNC79MFTsu3.2 0.25 ABZR86_RS08350 protease modulator HflC 0.53 ABZR86_RS06595 5'/3'-nucleotidase SurE low > 74
Kangiella aquimarina DSM 16071 0.25 B158DRAFT_1955 HflC protein 0.50 B158DRAFT_2296 3'-nucleotidase (EC 3.1.3.6)/5'-nucleotidase (EC 3.1.3.5)/exopolyphosphatase (EC 3.6.1.11) low > 40
Rahnella sp. WP5 0.25 EX31_RS08805 protease modulator HflC 0.45 EX31_RS07840 5'/3'-nucleotidase SurE low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.24 GFF828 HflC protein 0.42 GFF4792 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) low > 78
Vibrio cholerae E7946 ATCC 55056 0.23 CSW01_01850 protease modulator HflC 0.48 CSW01_02820 5'-nucleotidase SurE low > 62
Desulfovibrio vulgaris Hildenborough JW710 0.23 DVU0683 hflC protein, putative (TIGR) 0.27 DVU2142 surE stationary-phase survival protein SurE (TIGR) low > 55
Xanthomonas campestris pv. campestris strain 8004 0.22 Xcc-8004.3954.1 HflC protein 0.49 Xcc-8004.3131.1 hypothetical protein low > 74
Desulfovibrio vulgaris Miyazaki F 0.21 DvMF_2675 HflC protein (RefSeq) 0.27 DvMF_0021 stationary-phase survival protein SurE (RefSeq) low > 51
Echinicola vietnamensis KMM 6221, DSM 17526 0.19 Echvi_2032 HflC protein 0.26 Echvi_3388 5'/3'-nucleotidase SurE low > 79

Not shown: 17 genomes with orthologs for QEN71_RS06015 only; 13 genomes with orthologs for QEN71_RS22255 only