| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Paraburkholderia sabiae LMG 24235 | 1.0 | QEN71_RS26560 | | 3-deoxy-7-phosphoheptulonate synthase AroG | 1.0 | QEN71_RS22210 | | peptidoglycan editing factor PgeF | 0.74 | 3 |
| Burkholderia phytofirmans PsJN | 0.96 | BPHYT_RS03535 | | phospho-2-dehydro-3-deoxyheptonate aldolase | 0.71 | BPHYT_RS09140 | | laccase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.96 | H281DRAFT_04687 | | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase | 0.69 | H281DRAFT_00849 | | conserved hypothetical protein | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.96 | ABIE53_000850 | | 3-deoxy-7-phosphoheptulonate synthase | 0.70 | ABIE53_002063 | | YfiH family protein | low | > 113 |
| Ralstonia sp. UNC404CL21Col | 0.86 | ABZR87_RS01110 | | 3-deoxy-7-phosphoheptulonate synthase AroG | 0.34 | ABZR87_RS13310 | | peptidoglycan editing factor PgeF | low | > 80 |
| Ralstonia solanacearum GMI1000 | 0.86 | RS_RS13320 | | 3-deoxy-7-phosphoheptulonate synthase | 0.34 | RS_RS08210 | | peptidoglycan editing factor PgeF | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.85 | RR42_RS05860 | | phospho-2-dehydro-3-deoxyheptonate aldolase | 0.39 | RR42_RS07595 | | hypothetical protein | low | > 128 |
| Ralstonia solanacearum PSI07 | 0.85 | RPSI07_RS11845 | | 3-deoxy-7-phosphoheptulonate synthase | 0.32 | RPSI07_RS15975 | | peptidoglycan editing factor PgeF | — | — |
| Ralstonia solanacearum UW163 | 0.85 | UW163_RS08165 | | 3-deoxy-7-phosphoheptulonate synthase | 0.32 | UW163_RS14825 | | peptidoglycan editing factor PgeF | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.85 | RALBFv3_RS05460 | | 3-deoxy-7-phosphoheptulonate synthase | 0.32 | RALBFv3_RS01515 | | peptidoglycan editing factor PgeF | low | > 76 |
| Herbaspirillum seropedicae SmR1 | 0.82 | HSERO_RS07160 | | phospho-2-dehydro-3-deoxyheptonate aldolase | 0.36 | HSERO_RS15065 | | laccase | low | > 78 |
| Dechlorosoma suillum PS | 0.73 | Dsui_3444 | | phospho-2-dehydro-3-deoxyheptonate aldolase | 0.39 | Dsui_2531 | | uncharacterized protein, YfiH family | low | > 51 |
| Castellaniella sp019104865 MT123 | 0.71 | ABCV34_RS06825 | | 3-deoxy-7-phosphoheptulonate synthase AroG | 0.28 | ABCV34_RS01890 | | peptidoglycan editing factor PgeF | — | — |
| Serratia liquefaciens MT49 | 0.67 | IAI46_06405 | | 3-deoxy-7-phosphoheptulonate synthase AroG | 0.35 | IAI46_03990 | | polyphenol oxidase | low | > 86 |
| Dickeya dianthicola 67-19 | 0.67 | HGI48_RS06605 | | 3-deoxy-7-phosphoheptulonate synthase AroG | 0.36 | HGI48_RS16230 | | polyphenol oxidase | low | > 71 |
| Dickeya dianthicola ME23 | 0.67 | DZA65_RS06960 | | 3-deoxy-7-phosphoheptulonate synthase AroG | 0.36 | DZA65_RS17325 | | polyphenol oxidase | low | > 75 |
| Rhodanobacter sp. FW510-T8 | 0.67 | OKGIIK_09785 | | 3-deoxy-7-phosphoheptulonate synthase | 0.29 | OKGIIK_01795 | pgeF | peptidoglycan editing factor PgeF | low | > 52 |
| Shewanella loihica PV-4 | 0.67 | Shew_0851 | | phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) | 0.31 | Shew_2949 | | hypothetical protein (RefSeq) | low | > 60 |
| Dickeya dadantii 3937 | 0.67 | DDA3937_RS06560 | | 3-deoxy-7-phosphoheptulonate synthase AroG | 0.36 | DDA3937_RS16105 | | polyphenol oxidase | low | > 74 |
| Shewanella sp. ANA-3 | 0.67 | Shewana3_3528 | | phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) | 0.37 | Shewana3_3170 | | hypothetical protein (RefSeq) | low | > 73 |
| Rhodanobacter denitrificans MT42 | 0.67 | LRK55_RS02485 | | 3-deoxy-7-phosphoheptulonate synthase | 0.29 | LRK55_RS04740 | | peptidoglycan editing factor PgeF | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.67 | LRK54_RS02730 | | 3-deoxy-7-phosphoheptulonate synthase | 0.29 | LRK54_RS04960 | | peptidoglycan editing factor PgeF | low | > 59 |
| Dyella japonica UNC79MFTsu3.2 | 0.67 | ABZR86_RS00390 | | 3-deoxy-7-phosphoheptulonate synthase | 0.27 | ABZR86_RS10960 | | peptidoglycan editing factor PgeF | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.66 | HER17_RS14805 | | 3-deoxy-7-phosphoheptulonate synthase AroG | 0.35 | HER17_RS05405 | | polyphenol oxidase | low | > 75 |
| Escherichia coli ECOR38 | 0.66 | HEPCGN_01535 | aroG | 3-deoxy-7-phosphoheptulonate synthase AroG | 0.39 | HEPCGN_20380 | yfiH | purine nucleoside phosphorylase YfiH | low | > 87 |
| Shewanella oneidensis MR-1 | 0.66 | SO0756 | aroG | phospho-2-dehydro-3-deoxyheptonate aldolase, phe-sensitive (NCBI ptt file) | 0.34 | SO3578 | | conserved hypothetical protein TIGR00726 (NCBI ptt file) | low | > 76 |
| Escherichia coli ECRC98 | 0.66 | JDDGAC_10395 | aroG | 3-deoxy-7-phosphoheptulonate synthase AroG | 0.39 | JDDGAC_24920 | yfiH | purine nucleoside phosphorylase YfiH | low | > 86 |
| Escherichia coli ECRC102 | 0.66 | NIAGMN_04790 | aroG | 3-deoxy-7-phosphoheptulonate synthase AroG | 0.39 | NIAGMN_19025 | yfiH | purine nucleoside phosphorylase YfiH | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.66 | OHPLBJKB_02959 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive | 0.38 | OHPLBJKB_01113 | | Polyphenol oxidase | low | > 73 |
| Escherichia coli BW25113 | 0.66 | b0754 | aroG | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible (NCBI) | 0.38 | b2593 | yfiH | hypothetical protein (NCBI) | low | > 76 |
| Escherichia coli BL21 | 0.66 | ECD_00707 | | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible | 0.38 | ECD_02483 | | UPF0124 family protein | low | > 61 |
| Escherichia coli ECRC100 | 0.66 | OKFHMN_06740 | aroG | 3-deoxy-7-phosphoheptulonate synthase AroG | 0.39 | OKFHMN_21255 | yfiH | purine nucleoside phosphorylase YfiH | low | > 80 |
| Escherichia coli ECRC99 | 0.66 | KEDOAH_21225 | aroG | 3-deoxy-7-phosphoheptulonate synthase AroG | 0.39 | KEDOAH_06965 | yfiH | purine nucleoside phosphorylase YfiH | — | — |
| Escherichia coli ECOR27 | 0.66 | NOLOHH_23170 | aroG | 3-deoxy-7-phosphoheptulonate synthase AroG | 0.38 | NOLOHH_12930 | yfiH | purine nucleoside phosphorylase YfiH | low | > 75 |
| Escherichia fergusonii Becca | 0.66 | EFB2_03352 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive | 0.38 | EFB2_01297 | | Polyphenol oxidase | low | > 86 |
| Escherichia coli ECRC101 | 0.66 | MCAODC_25960 | aroG | 3-deoxy-7-phosphoheptulonate synthase AroG | 0.39 | MCAODC_11785 | yfiH | purine nucleoside phosphorylase YfiH | low | > 87 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.66 | GFF8 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | 0.39 | GFF4183 | | COG1496: Uncharacterized conserved protein | — | — |
| Pantoea sp. MT58 | 0.66 | IAI47_13605 | | 3-deoxy-7-phosphoheptulonate synthase AroG | 0.32 | IAI47_04430 | | polyphenol oxidase | low | > 76 |
| Escherichia coli Nissle 1917 | 0.66 | ECOLIN_RS04015 | | 3-deoxy-7-phosphoheptulonate synthase AroG | 0.38 | ECOLIN_RS14670 | | purine nucleoside phosphorylase YfiH | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.66 | Xcc-8004.704.1 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) | 0.30 | Xcc-8004.1363.1 | | COG1496: Uncharacterized conserved protein | — | — |
| Rahnella sp. WP5 | 0.66 | EX31_RS23545 | | 3-deoxy-7-phosphoheptulonate synthase AroG | 0.38 | EX31_RS07565 | | polyphenol oxidase | low | > 89 |
| Caulobacter crescentus NA1000 Δfur | 0.65 | CCNA_01463 | | 3-deoxy-7-phosphoheptulonate synthase | 0.22 | CCNA_00523 | | multicopper polyphenol oxidase | low | > 67 |
| Escherichia coli ECRC62 | 0.65 | BNILDI_21165 | aroG | 3-deoxy-7-phosphoheptulonate synthase AroG | 0.38 | BNILDI_11735 | yfiH | purine nucleoside phosphorylase YfiH | low | > 75 |
| Caulobacter crescentus NA1000 | 0.65 | CCNA_01463 | | 3-deoxy-7-phosphoheptulonate synthase | 0.22 | CCNA_00523 | | multicopper polyphenol oxidase | low | > 66 |
| Enterobacter sp. TBS_079 | 0.65 | MPMX20_01381 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive | 0.38 | MPMX20_03462 | | Polyphenol oxidase | low | > 85 |
| Klebsiella michiganensis M5al | 0.65 | BWI76_RS08600 | | 3-deoxy-7-phosphoheptulonate synthase | 0.38 | BWI76_RS21445 | | hypothetical protein | low | > 92 |
| Vibrio cholerae E7946 ATCC 55056 | 0.65 | CSW01_19270 | | 3-deoxy-7-phosphoheptulonate synthase | 0.30 | CSW01_03700 | | multi-copper polyphenol oxidoreductase | low | > 62 |
| Variovorax sp. OAS795 | 0.65 | ABID97_RS06345 | | 3-deoxy-7-phosphoheptulonate synthase | 0.30 | ABID97_RS12405 | | peptidoglycan editing factor PgeF | low | > 91 |
| Variovorax sp. SCN45 | 0.65 | GFF4447 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphat e synthase I alpha (EC 2.5.1.54) | 0.35 | GFF807 | | FIG00003370: Multicopper polyphenol oxidase | low | > 127 |
| Enterobacter asburiae PDN3 | 0.65 | EX28DRAFT_2241 | | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54) | 0.36 | EX28DRAFT_2694 | | YfiH family protein | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.64 | LU632_RS15925 | aroG | 3-deoxy-7-phosphoheptulonate synthase AroG | 0.32 | LU632_RS16940 | pgeF | polyphenol oxidase | low | > 74 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.63 | GFF581 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | 0.32 | GFF4798 | | COG1496: Uncharacterized conserved protein | — | — |
| Acidovorax sp. GW101-3H11 | 0.63 | Ac3H11_4034 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | 0.35 | Ac3H11_2305 | | COG1496: Uncharacterized conserved protein | low | > 79 |
| Rhodopseudomonas palustris CGA009 | 0.63 | TX73_000140 | | 3-deoxy-7-phosphoheptulonate synthase | 0.19 | TX73_022600 | | peptidoglycan editing factor PgeF | low | > 86 |
| Shewanella amazonensis SB2B | 0.61 | Sama_0657 | | phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) | 0.33 | Sama_2604 | | hypothetical protein (RefSeq) | low | > 62 |
| Acinetobacter radioresistens SK82 | 0.49 | MPMX26_01673 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | 0.24 | MPMX26_00736 | | Polyphenol oxidase | low | > 36 |
| Pseudomonas stutzeri RCH2 | 0.48 | Psest_2331 | | phospho-2-dehydro-3-deoxyheptonate aldolase | 0.34 | Psest_0710 | | uncharacterized protein, YfiH family | — | — |
| Pseudomonas sp. S08-1 | 0.48 | OH686_01760 | | 3-deoxy-7-phosphoheptulonate synthase | 0.35 | OH686_16415 | | Multicopper polyphenol oxidase | low | > 80 |
| Bifidobacterium breve UCC2003 | 0.48 | BBR_RS19195 | | 3-deoxy-7-phosphoheptulonate synthase | 0.17 | BBR_RS19275 | | laccase domain-containing protein | low | > 34 |
| Kangiella aquimarina DSM 16071 | 0.47 | B158DRAFT_1384 | | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54) | 0.31 | B158DRAFT_2533 | | Uncharacterized conserved protein | low | > 40 |
| Pseudomonas putida KT2440 | 0.47 | PP_2324 | | tyr-sensitive phospho-2-dehydro-3-deoxyheptonate aldolase | 0.35 | PP_0624 | | Uncharacterized protein YfiH | low | > 96 |
| Pseudomonas syringae pv. syringae B728a | 0.47 | Psyr_2073 | | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase | 0.34 | Psyr_0727 | | Protein of unknown function DUF152 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.47 | Psyr_2073 | | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase | 0.34 | Psyr_0727 | | Protein of unknown function DUF152 | low | > 86 |
| Pseudomonas fluorescens SBW25-INTG | 0.46 | PFLU_RS08380 | | 3-deoxy-7-phosphoheptulonate synthase | 0.36 | PFLU_RS03875 | | peptidoglycan editing factor PgeF | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.46 | PFLU_RS08380 | | 3-deoxy-7-phosphoheptulonate synthase | 0.36 | PFLU_RS03875 | | peptidoglycan editing factor PgeF | low | > 109 |
| Pseudomonas simiae WCS417 | 0.46 | PS417_08430 | | phospho-2-dehydro-3-deoxyheptonate aldolase | 0.36 | PS417_03825 | | laccase | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.46 | AO353_19030 | | phospho-2-dehydro-3-deoxyheptonate aldolase | 0.36 | AO353_14225 | | laccase | low | > 101 |
| Pseudomonas fluorescens FW300-N2C3 | 0.46 | AO356_03200 | | phospho-2-dehydro-3-deoxyheptonate aldolase | 0.38 | AO356_15930 | | laccase | low | > 104 |
| Pseudomonas fluorescens FW300-N1B4 | 0.46 | Pf1N1B4_289 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | 0.36 | Pf1N1B4_2823 | | COG1496: Uncharacterized conserved protein | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.46 | Pf6N2E2_2470 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | 0.36 | Pf6N2E2_5128 | | COG1496: Uncharacterized conserved protein | low | > 103 |
| Pseudomonas sp. RS175 | 0.46 | PFR28_00962 | | Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive | 0.36 | PFR28_03747 | | Polyphenol oxidase | low | > 88 |
| Pseudomonas fluorescens GW456-L13 | 0.46 | PfGW456L13_2224 | | 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) | 0.33 | PfGW456L13_1494 | | COG1496: Uncharacterized conserved protein | low | > 87 |
| Marinobacter adhaerens HP15 | 0.46 | HP15_1814 | | phospho-2-dehydro-3-heoxyheptonate aldolase | 0.36 | HP15_528 | | multi-copper polyphenol oxidoreductase, laccase | low | > 73 |
Not shown: 1 genomes with orthologs for QEN71_RS26560 only; 23 genomes with orthologs for QEN71_RS22210 only