Conservation of cofitness between Psyr_2519 and Psyr_4275 in Pseudomonas syringae pv. syringae B728a

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_2519 Aldo/keto reductase 1.0 Psyr_4275 DNA replication and repair protein RadA 0.39 16
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_2519 Aldo/keto reductase 1.00 Psyr_4275 DNA replication and repair protein RadA low > 86
Pseudomonas fluorescens FW300-N2E2 0.82 Pf6N2E2_1615 Aldo-keto reductase 0.97 Pf6N2E2_5076 DNA repair protein RadA low > 103
Pseudomonas fluorescens FW300-N2C3 0.80 AO356_23370 aldo/keto reductase 0.97 AO356_15680 DNA repair protein RadA low > 104
Pseudomonas sp. RS175 0.78 PFR28_02364 Aldo-keto reductase YhdN 0.96 PFR28_03792 DNA repair protein RadA low > 88
Pseudomonas fluorescens FW300-N2E3 0.71 AO353_23805 aldo/keto reductase 0.96 AO353_13980 DNA repair protein RadA low > 101
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_4693 Oxidoreductase 0.97 Pf1N1B4_2768 DNA repair protein RadA low > 87
Pseudomonas simiae WCS417 0.70 PS417_14445 aldo/keto reductase 0.96 PS417_24305 DNA repair protein RadA low > 88
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS16375 aldo/keto reductase 0.96 PFLU_RS26230 DNA repair protein RadA low > 109
Pseudomonas fluorescens SBW25 0.69 PFLU_RS16375 aldo/keto reductase 0.96 PFLU_RS26230 DNA repair protein RadA low > 109
Pectobacterium carotovorum WPP14 0.69 HER17_RS18075 aldo/keto reductase 0.62 HER17_RS19085 DNA repair protein RadA low > 75
Serratia liquefaciens MT49 0.67 IAI46_02855 aldo/keto reductase 0.64 IAI46_02945 DNA repair protein RadA low > 86
Pseudomonas fluorescens GW456-L13 0.65 PfGW456L13_2966 Aldo-keto reductase 0.96 PfGW456L13_1442 DNA repair protein RadA low > 87
Dickeya dianthicola 67-19 0.65 HGI48_RS03345 aldo/keto reductase 0.61 HGI48_RS02380 DNA repair protein RadA low > 71
Xanthomonas campestris pv. campestris strain 8004 0.65 Xcc-8004.4648.1 Oxidoreductase 0.65 Xcc-8004.3812.1 DNA repair protein RadA low > 74
Rhodanobacter sp. FW510-T8 0.64 OKGIIK_13390 aldo/keto reductase 0.63 OKGIIK_09580 radA DNA repair protein RadA low > 52
Herbaspirillum seropedicae SmR1 0.64 HSERO_RS16785 aldo/keto reductase 0.59 HSERO_RS10745 DNA repair protein RadA 0.30 21
Rhodanobacter denitrificans MT42 0.64 LRK55_RS10155 aldo/keto reductase 0.63 LRK55_RS02280 DNA repair protein RadA low > 63
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS10515 aldo/keto reductase 0.63 LRK54_RS02525 DNA repair protein RadA low > 59
Dickeya dianthicola ME23 0.64 DZA65_RS03390 aldo/keto reductase 0.61 DZA65_RS02485 DNA repair protein RadA low > 75
Pontibacter actiniarum KMM 6156, DSM 19842 0.63 CA264_05950 aldo/keto reductase 0.42 CA264_17125 DNA repair protein RadA low > 74
Dickeya dadantii 3937 0.63 DDA3937_RS03195 aldo/keto reductase 0.61 DDA3937_RS02420 DNA repair protein RadA low > 74
Rahnella sp. WP5 0.63 EX31_RS04125 aldo/keto reductase 0.63 EX31_RS04030 DNA repair protein RadA low > 89
Dyella japonica UNC79MFTsu3.2 0.62 ABZR86_RS16200 aldo/keto reductase 0.62 ABZR86_RS08845 DNA repair protein RadA low > 74
Brevundimonas sp. GW460-12-10-14-LB2 0.59 A4249_RS07260 aldo/keto reductase 0.41 A4249_RS03745 DNA repair protein RadA low > 48
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS20325 aldo/keto reductase 0.59 RR42_RS12030 DNA repair protein RadA — —
Azospirillum sp. SherDot2 0.56 MPMX19_01216 Aldo-keto reductase IolS 0.45 MPMX19_00904 DNA repair protein RadA low > 112
Agrobacterium fabrum C58 0.54 Atu0260 aldo-keto reductase 0.45 Atu1077 DNA repair protein low > 89
Lysobacter sp. OAE881 0.52 ABIE51_RS11290 aldo/keto reductase 0.61 ABIE51_RS07685 DNA repair protein RadA low > 62
Rhodopseudomonas palustris CGA009 0.51 TX73_015655 aldo/keto reductase 0.44 TX73_015980 DNA repair protein RadA low > 86
Caulobacter crescentus NA1000 Δfur 0.47 CCNA_03097 aldo/keto reductase family protein 0.41 CCNA_01732 DNA repair protein RadA low > 67
Rhodospirillum rubrum S1H 0.47 Rru_A1059 Aldo/keto reductase (NCBI) 0.42 Rru_A0406 DNA repair protein RadA (NCBI) low > 58
Caulobacter crescentus NA1000 0.47 CCNA_03097 aldo/keto reductase family protein 0.41 CCNA_01732 DNA repair protein RadA low > 66
Rhizobium sp. OAE497 0.47 ABIE40_RS04910 aldo/keto reductase 0.45 ABIE40_RS06280 DNA repair protein RadA low > 107
Escherichia coli ECOR38 0.46 HEPCGN_07675 pdxI aldo/keto reductase 0.65 HEPCGN_09195 radA DNA repair protein RadA low > 87
Escherichia coli Nissle 1917 0.45 ECOLIN_RS26205 aldo/keto reductase 0.65 ECOLIN_RS25190 DNA repair protein RadA — —
Variovorax sp. OAS795 0.45 ABID97_RS21725 aldo/keto reductase 0.59 ABID97_RS03770 DNA repair protein RadA low > 91
Acidovorax sp. GW101-3H11 0.45 Ac3H11_4133 Aldo-keto reductase 0.57 Ac3H11_3371 DNA repair protein RadA low > 79
Escherichia fergusonii Becca 0.45 EFB2_03742 Aldo-keto reductase IolS 0.65 EFB2_04057 DNA repair protein RadA low > 86
Echinicola vietnamensis KMM 6221, DSM 17526 0.44 Echvi_4177 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 0.44 Echvi_1031 DNA repair protein RadA low > 79
Pantoea sp. MT58 0.44 IAI47_08360 aldo/keto reductase 0.63 IAI47_16345 DNA repair protein RadA low > 76
Ralstonia solanacearum GMI1000 0.44 RS_RS01075 aldo/keto reductase 0.58 RS_RS06880 DNA repair protein RadA low > 80
Variovorax sp. SCN45 0.43 GFF3107 Oxidoreductase, aldo/keto reductase family 0.59 GFF5087 DNA repair protein RadA low > 127
Azospirillum brasilense Sp245 0.43 AZOBR_RS21420 aldo/keto reductase 0.46 AZOBR_RS08320 DNA repair protein RadA low > 97
Pedobacter sp. GW460-11-11-14-LB5 0.43 CA265_RS00435 aldo/keto reductase 0.43 CA265_RS22660 DNA repair protein RadA low > 88
Mucilaginibacter yixingensis YX-36 DSM 26809 0.43 ABZR88_RS08510 aldo/keto reductase 0.43 ABZR88_RS20495 DNA repair protein RadA low > 71
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS08125 aldo/keto reductase 0.60 QEN71_RS06320 DNA repair protein RadA low > 153
Ralstonia solanacearum UW163 0.42 UW163_RS23080 aldo/keto reductase 0.59 UW163_RS13540 DNA repair protein RadA — —
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS22535 aldo/keto reductase 0.59 RALBFv3_RS00210 DNA repair protein RadA low > 76
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF3816 Aldo-keto reductase 0.56 GFF1833 DNA repair protein RadA low > 90
Enterobacter sp. TBS_079 0.42 MPMX20_00046 Aldo-keto reductase IolS 0.64 MPMX20_00694 DNA repair protein RadA low > 85
Castellaniella sp019104865 MT123 0.41 ABCV34_RS02780 aldo/keto reductase 0.57 ABCV34_RS02345 DNA repair protein RadA low > 48
Ralstonia solanacearum PSI07 0.41 RPSI07_RS00620 aldo/keto reductase 0.58 RPSI07_RS17270 DNA repair protein RadA low > 81
Magnetospirillum magneticum AMB-1 0.41 AMB_RS01300 aldo/keto reductase 0.45 AMB_RS10555 DNA repair protein RadA low > 64
Phocaeicola dorei CL03T12C01 0.37 ABI39_RS19255 aldo/keto reductase 0.43 ABI39_RS10420 DNA repair protein RadA low > 72
Parabacteroides merdae CL09T00C40 0.36 HMPREF1078_RS08255 aldo/keto reductase 0.44 HMPREF1078_RS08395 DNA repair protein RadA low > 61
Klebsiella michiganensis M5al 0.36 BWI76_RS21735 aldehyde oxidase 0.64 BWI76_RS04165 DNA repair protein RadA low > 92
Bacteroides thetaiotaomicron VPI-5482 0.36 BT1115 aldo/keto reductase (NCBI ptt file) 0.43 BT2406 putative DNA repair protein (NCBI ptt file) low > 81
Phocaeicola vulgatus CL09T03C04 0.36 HMPREF1058_RS05460 aldo/keto reductase 0.43 HMPREF1058_RS14715 DNA repair protein RadA low > 67
Marinobacter adhaerens HP15 0.27 HP15_2827 oxidoreductase, aldo/keto reductase family 0.62 HP15_487 DNA repair protein RadA low > 73
Synechococcus elongatus PCC 7942 0.23 Synpcc7942_0026 hypothetical protein 0.41 Synpcc7942_1452 radA DNA repair protein RadA low > 38
Ralstonia sp. UNC404CL21Col 0.23 ABZR87_RS04135 aldo/keto reductase 0.59 ABZR87_RS11670 DNA repair protein RadA low > 80
Bifidobacterium breve UCC2003 0.20 BBR_RS14120 aldo/keto reductase 0.39 BBR_RS18740 DNA repair protein RadA low > 34
Mycobacterium tuberculosis H37Rv 0.16 Rv2298 Conserved protein 0.34 Rv3585 DNA repair protein RadA (DNA repair protein SMS) low > 58
Shewanella amazonensis SB2B 0.14 Sama_3147 aldo/keto reductase family oxidoreductase (RefSeq) 0.61 Sama_0981 DNA repair protein RadA (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.14 MIT1002_03752 Oxidoreductase YdhF 0.67 MIT1002_02706 Lon protease 2 low > 70

Not shown: 0 genomes with orthologs for Psyr_2519 only; 36 genomes with orthologs for Psyr_4275 only