Conservation of cofitness between Psyr_1907 and Psyr_3008 in Pseudomonas syringae pv. syringae B728a

81 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_1907 GTP cyclohydrolase I 1.0 Psyr_3008 Undecaprenyl-diphosphatase 0.59 4
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_1907 GTP cyclohydrolase I 1.00 Psyr_3008 Undecaprenyl-diphosphatase — —
Pseudomonas fluorescens GW456-L13 0.81 PfGW456L13_4015 NADPH dependent preQ0 reductase (EC 1.7.1.13) 0.86 PfGW456L13_3016 Undecaprenyl-diphosphatase (EC 3.6.1.27) low > 87
Pseudomonas lactucae CFBP13502 0.81 GEMAOFIL_01671 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.89 GEMAOFIL_03252 Undecaprenyl-diphosphatase low > 93
Pseudomonas fluorescens FW300-N2E3 0.81 AO353_00345 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.87 AO353_25760 UDP pyrophosphate phosphatase low > 101
Pseudomonas sp. DMC3 0.80 GFF1298 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.88 GFF2690 Undecaprenyl-diphosphatase low > 89
Pseudomonas simiae WCS417 0.80 PS417_07695 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.88 PS417_13065 UDP pyrophosphate phosphatase low > 88
Pseudomonas fluorescens SBW25-INTG 0.80 PFLU_RS07770 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.87 PFLU_RS13705 undecaprenyl-diphosphate phosphatase low > 109
Pseudomonas fluorescens SBW25 0.80 PFLU_RS07770 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.87 PFLU_RS13705 undecaprenyl-diphosphate phosphatase low > 109
Pseudomonas fluorescens FW300-N1B4 0.79 Pf1N1B4_65 NADPH dependent preQ0 reductase (EC 1.7.1.13) 0.86 Pf1N1B4_4741 Undecaprenyl-diphosphatase (EC 3.6.1.27) low > 87
Pseudomonas sp. RS175 0.79 PFR28_01136 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.88 PFR28_01689 Undecaprenyl-diphosphatase low > 88
Pseudomonas fluorescens FW300-N2E2 0.78 Pf6N2E2_2264 NADPH dependent preQ0 reductase (EC 1.7.1.13) 0.86 Pf6N2E2_773 Undecaprenyl-diphosphatase (EC 3.6.1.27) low > 103
Pseudomonas fluorescens FW300-N2C3 0.78 AO356_02205 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.87 AO356_27775 UDP pyrophosphate phosphatase low > 104
Pseudomonas sp. SVBP6 0.75 COO64_RS09520 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.88 COO64_RS14725 undecaprenyl-diphosphate phosphatase low > 93
Pseudomonas stutzeri RCH2 0.75 Psest_2714 7-cyano-7-deazaguanine reductase 0.86 Psest_2113 undecaprenyl-diphosphatase UppP — —
Pseudomonas sp. BP01 0.75 JOY50_RS25160 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.85 JOY50_RS05735 undecaprenyl-diphosphate phosphatase low > 84
Pseudomonas putida KT2440 0.74 PP_2160 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.84 PP_2862 Undecaprenyl-diphosphatase low > 96
Pseudomonas segetis P6 0.74 MPMX49_01903 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.85 MPMX49_02210 Undecaprenyl-diphosphatase 0.48 44
Pseudomonas aeruginosa PA14 0.70 IKLFDK_14200 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.82 IKLFDK_09565 undecaprenyl-diphosphate phosphatase low > 100
Pseudomonas sp. S08-1 0.70 OH686_22700 queuine synthase 0.83 OH686_00730 undecaprenyl-diphosphatase UppP — —
Dechlorosoma suillum PS 0.49 Dsui_0505 7-cyano-7-deazaguanine reductase 0.56 Dsui_0449 undecaprenyl-diphosphatase UppP — —
Rhodanobacter sp. FW510-T8 0.49 OKGIIK_13395 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.22 OKGIIK_14940 undecaprenyl-diphosphate phosphatase low > 53
Ralstonia solanacearum GMI1000 0.48 RS_RS02220 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.57 RS_RS03525 undecaprenyl-diphosphatase — —
Ralstonia solanacearum PSI07 0.48 RPSI07_RS21815 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.57 RPSI07_RS20515 undecaprenyl-diphosphate phosphatase — —
Vibrio cholerae E7946 ATCC 55056 0.48 CSW01_04620 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.25 CSW01_02795 undecaprenyl-diphosphatase low > 62
Shewanella loihica PV-4 0.48 Shew_2654 queF 7-cyano-7-deazaguanine reductase (RefSeq) 0.27 Shew_1004 undecaprenyl pyrophosphate phosphatase (RefSeq) low > 60
Rhodanobacter sp000427505 FW510-R12 0.48 LRK53_RS03330 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.26 LRK53_RS00300 undecaprenyl-diphosphate phosphatase — —
Rhodanobacter denitrificans MT42 0.48 LRK55_RS10150 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.28 LRK55_RS07875 undecaprenyl-diphosphate phosphatase low > 63
Ralstonia solanacearum UW163 0.48 UW163_RS02195 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.56 UW163_RS00820 undecaprenyl-diphosphate phosphatase — —
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS10510 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.28 LRK54_RS08125 undecaprenyl-diphosphate phosphatase low > 59
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS11390 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.56 RALBFv3_RS12745 undecaprenyl-diphosphate phosphatase — —
Dyella japonica UNC79MFTsu3.2 0.48 ABZR86_RS16195 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.26 ABZR86_RS15435 undecaprenyl-diphosphate phosphatase — —
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS02310 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.56 RR42_RS15630 UDP pyrophosphate phosphatase — —
Shewanella sp. ANA-3 0.47 Shewana3_2835 queF 7-cyano-7-deazaguanine reductase (RefSeq) 0.27 Shewana3_3079 undecaprenyl pyrophosphate phosphatase (RefSeq) low > 73
Rahnella sp. WP5 0.46 EX31_RS13085 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.36 EX31_RS08165 undecaprenyl-diphosphate phosphatase low > 89
Shewanella oneidensis MR-1 0.46 SO1608 conserved hypothetical protein (NCBI ptt file) 0.50 SO4274 undecaprenol kinase, putative (NCBI ptt file) low > 76
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS07355 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.57 ABZR87_RS08795 undecaprenyl-diphosphate phosphatase low > 80
Klebsiella pneumoniae MKP103 0.45 KDGMDA_03395 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.39 KDGMDA_05290 undecaprenyl-diphosphate phosphatase low > 95
Pectobacterium carotovorum WPP14 0.45 HER17_RS16390 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.37 HER17_RS04015 undecaprenyl-diphosphate phosphatase low > 75
Enterobacter asburiae PDN3 0.45 EX28DRAFT_2876 7-cyano-7-deazaguanine reductase 0.40 EX28DRAFT_3085 undecaprenyl-diphosphatase UppP low > 76
Enterobacter sp. TBS_079 0.45 MPMX20_03664 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.40 MPMX20_03894 Undecaprenyl-diphosphatase low > 85
Shewanella amazonensis SB2B 0.45 Sama_1120 queF 7-cyano-7-deazaguanine reductase (RefSeq) 0.25 Sama_0831 undecaprenyl pyrophosphate phosphatase (RefSeq) low > 62
Escherichia coli ECRC98 0.45 JDDGAC_23855 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.39 JDDGAC_22340 bacA undecaprenyl-diphosphate phosphatase low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF4849 NADPH dependent preQ0 reductase (EC 1.7.1.13) 0.40 GFF3171 Undecaprenyl-diphosphatase (EC 3.6.1.27) low > 78
Escherichia coli ECRC101 0.45 MCAODC_10715 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.39 MCAODC_09220 bacA undecaprenyl-diphosphate phosphatase low > 88
Escherichia coli ECRC99 0.45 KEDOAH_07940 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.39 KEDOAH_09440 bacA undecaprenyl-diphosphate phosphatase — —
Escherichia coli ECRC100 0.45 OKFHMN_20190 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.39 OKFHMN_18705 bacA undecaprenyl-diphosphate phosphatase low > 79
Escherichia coli ECRC102 0.45 NIAGMN_17960 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.39 NIAGMN_16470 bacA undecaprenyl-diphosphate phosphatase low > 80
Escherichia fergusonii Becca 0.45 EFB2_01123 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.39 EFB2_00754 Undecaprenyl-diphosphatase low > 86
Escherichia coli ECOR27 0.45 NOLOHH_12070 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.39 NOLOHH_10495 bacA undecaprenyl-diphosphate phosphatase low > 76
Escherichia coli Nissle 1917 0.45 ECOLIN_RS15580 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.39 ECOLIN_RS17655 undecaprenyl-diphosphate phosphatase low > 55
Escherichia coli ECRC62 0.45 BNILDI_10575 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.39 BNILDI_01020 bacA undecaprenyl-diphosphate phosphatase low > 75
Escherichia coli ECOR38 0.45 HEPCGN_19445 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.39 HEPCGN_17560 bacA undecaprenyl-diphosphate phosphatase low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_00937 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.39 OHPLBJKB_00647 Undecaprenyl-diphosphatase low > 74
Paraburkholderia bryophila 376MFSha3.1 0.44 H281DRAFT_01889 7-cyano-7-deazaguanine reductase 0.56 H281DRAFT_04037 Undecaprenyl-diphosphatase (EC 3.6.1.27) — —
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS03135 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.53 BPHYT_RS15475 UDP pyrophosphate phosphatase — —
Klebsiella michiganensis M5al 0.44 BWI76_RS22865 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.40 BWI76_RS24480 undecaprenyl-diphosphatase low > 92
Escherichia coli BL21 0.44 ECD_02639 7-cyano-7-deazaguanine reductase (NADPH-dependent) 0.39 ECD_02927 undecaprenyl pyrophosphate phosphatase low > 61
Serratia liquefaciens MT49 0.44 IAI46_21580 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.36 IAI46_22080 undecaprenyl-diphosphate phosphatase low > 86
Escherichia coli BW25113 0.44 b2794 yqcD hypothetical protein (NCBI) 0.39 b3057 bacA undecaprenyl pyrophosphate phosphatase (NCBI) low > 76
Hydrogenophaga sp. GW460-11-11-14-LB1 0.44 GFF722 NADPH dependent preQ0 reductase (EC 1.7.1.13) 0.26 GFF813 Undecaprenyl-diphosphatase (EC 3.6.1.27) — —
Erwinia amylovora T8 0.44 OLJFJH_09195 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.38 OLJFJH_07615 undecaprenyl-diphosphate phosphatase low > 58
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS01975 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.53 QEN71_RS03215 undecaprenyl-diphosphate phosphatase — —
Paraburkholderia graminis OAS925 0.44 ABIE53_000759 7-cyano-7-deazaguanine reductase 0.55 ABIE53_003261 undecaprenyl-diphosphatase low > 113
Dickeya dadantii 3937 0.44 DDA3937_RS04655 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.35 DDA3937_RS17125 undecaprenyl-diphosphate phosphatase low > 74
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS19515 7-cyano-7-deazaguanine reductase 0.54 HSERO_RS02455 UDP pyrophosphate phosphatase low > 78
Dickeya dianthicola ME23 0.44 DZA65_RS04535 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.36 DZA65_RS18260 undecaprenyl-diphosphate phosphatase 0.66 15
Dickeya dianthicola 67-19 0.43 HGI48_RS04615 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.36 HGI48_RS17175 undecaprenyl-diphosphate phosphatase 0.65 46
Erwinia tracheiphila HP pepo 2.2 0.43 IJEDHG_17300 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.40 IJEDHG_14365 bacA undecaprenyl-diphosphate phosphatase — —
Erwinia tracheiphila SCR3 0.43 LU632_RS06280 queF NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.40 LU632_RS20695 bacA undecaprenyl-diphosphate phosphatase low > 74
Pantoea sp. MT58 0.43 IAI47_04050 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.39 IAI47_03080 undecaprenyl-diphosphate phosphatase low > 76
Pantoea agglomerans CFBP13505 P0401 0.43 PagCFBP13505_RS16920 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.39 PagCFBP13505_RS11900 undecaprenyl-diphosphate phosphatase low > 74
Acidovorax sp. GW101-3H11 0.43 Ac3H11_1595 NADPH dependent preQ0 reductase (EC 1.7.1.13) 0.53 Ac3H11_3630 Undecaprenyl-diphosphatase (EC 3.6.1.27) low > 79
Variovorax sp. SCN45 0.42 GFF6017 NADPH-dependent 7-cyano-7-deazaguanine reductase (EC 1.7.1.13) 0.54 GFF6649 Undecaprenyl-diphosphatase (EC 3.6.1.27) low > 127
Kangiella aquimarina DSM 16071 0.42 B158DRAFT_2159 7-cyano-7-deazaguanine reductase 0.23 B158DRAFT_0833 undecaprenyl-diphosphatase UppP — —
Lysobacter sp. OAE881 0.41 ABIE51_RS00515 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.26 ABIE51_RS01460 undecaprenyl-diphosphate phosphatase — —
Variovorax sp. OAS795 0.41 ABID97_RS07920 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.54 ABID97_RS20835 undecaprenyl-diphosphate phosphatase — —
Alteromonas macleodii MIT1002 0.41 MIT1002_00988 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.25 MIT1002_00743 Undecaprenyl-diphosphatase — —
Xanthomonas campestris pv. campestris strain 8004 0.40 Xcc-8004.4789.1 NADPH dependent preQ0 reductase (EC 1.7.1.13) 0.26 Xcc-8004.245.1 Undecaprenyl-diphosphatase (EC 3.6.1.27) — —
Marinobacter adhaerens HP15 0.40 HP15_1463 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.23 HP15_3402 undecaprenyl pyrophosphate phosphatase — —
Acinetobacter baumannii LAC-4 0.39 RR41_RS05840 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF 0.47 RR41_RS03660 undecaprenyl-diphosphate phosphatase low > 55
Acinetobacter radioresistens SK82 0.37 MPMX26_02105 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.41 MPMX26_02574 Undecaprenyl-diphosphatase low > 36

Not shown: 1 genomes with orthologs for Psyr_1907 only; 36 genomes with orthologs for Psyr_3008 only