Conservation of cofitness between Psyr_0815 and Psyr_2077 in Pseudomonas syringae pv. syringae B728a

80 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0815 nicotinate-nucleotide pyrophosphorylase (carboxylating) 1.0 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein 0.72 9
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0815 nicotinate-nucleotide pyrophosphorylase (carboxylating) 1.00 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein low > 86
Pseudomonas sp. RS175 0.91 PFR28_00098 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.95 PFR28_00966 HTH-type transcriptional regulator CysB 0.54 18
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_05520 nicotinate-nucleotide pyrophosphorylase 0.95 AO353_19060 CysB family transcriptional regulator 0.39 40
Pseudomonas lactucae CFBP13502 0.91 GEMAOFIL_00989 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.94 GEMAOFIL_01824 HTH-type transcriptional regulator CysB low > 93
Pseudomonas fluorescens FW300-N1B4 0.90 Pf1N1B4_1153 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.95 Pf1N1B4_283 Cys regulon transcriptional activator CysB — —
Pseudomonas fluorescens SBW25-INTG 0.90 PFLU_RS03970 carboxylating nicotinate-nucleotide diphosphorylase 0.94 PFLU_RS08410 HTH-type transcriptional regulator CysB 0.42 42
Pseudomonas fluorescens SBW25 0.90 PFLU_RS03970 carboxylating nicotinate-nucleotide diphosphorylase 0.94 PFLU_RS08410 HTH-type transcriptional regulator CysB low > 109
Pseudomonas simiae WCS417 0.90 PS417_03925 nicotinate-nucleotide pyrophosphorylase 0.93 PS417_08460 CysB family transcriptional regulator — —
Pseudomonas sp. SVBP6 0.89 COO64_RS03520 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.94 COO64_RS09830 cysB HTH-type transcriptional regulator CysB low > 93
Pseudomonas sp. DMC3 0.89 GFF4996 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.94 GFF4617 HTH-type transcriptional regulator CysB low > 89
Pseudomonas fluorescens FW300-N2E2 0.88 Pf6N2E2_3346 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.95 Pf6N2E2_2465 Cys regulon transcriptional activator CysB 0.47 16
Pseudomonas fluorescens FW300-N2C3 0.87 AO356_07370 nicotinate-nucleotide pyrophosphorylase 0.95 AO356_03180 CysB family transcriptional regulator 0.41 46
Pseudomonas fluorescens GW456-L13 0.86 PfGW456L13_5082 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.95 PfGW456L13_2230 Cys regulon transcriptional activator CysB 0.60 37
Pseudomonas putida KT2440 0.86 PP_0787 quinolinate phosphoribosyltransferase (decarboxylating) monomer 0.92 PP_2327 transcriptional dual regulator / CysB-O-acetyl-L-serine 0.70 8
Pseudomonas segetis P6 0.85 MPMX49_03901 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.92 MPMX49_02643 HTH-type transcriptional regulator CysB — —
Pseudomonas sp. BP01 0.85 JOY50_RS19345 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.93 JOY50_RS25785 cysB HTH-type transcriptional regulator CysB 0.86 69
Pseudomonas stutzeri RCH2 0.85 Psest_0718 nicotinate-nucleotide pyrophosphorylase 0.89 Psest_2329 Transcriptional regulator 0.45 17
Pseudomonas sp. S08-1 0.80 OH686_16520 nicotinate-nucleotide diphosphorylase (carboxylating) 0.92 OH686_01730 Cys regulon transcriptional activator CysB 0.62 71
Pseudomonas aeruginosa PA14 0.79 IKLFDK_01460 carboxylating nicotinate-nucleotide diphosphorylase 0.91 IKLFDK_08475 HTH-type transcriptional regulator CysB low > 100
Marinobacter adhaerens HP15 0.68 HP15_1305 nicotinate-nucleotide pyrophosphorylase 0.77 HP15_1854 transcriptional regulator, LysR family — —
Dyella japonica UNC79MFTsu3.2 0.58 ABZR86_RS09850 carboxylating nicotinate-nucleotide diphosphorylase 0.35 ABZR86_RS05885 LysR substrate-binding domain-containing protein low > 74
Dechlorosoma suillum PS 0.58 Dsui_2901 nicotinate-nucleotide pyrophosphorylase 0.53 Dsui_1988 transcriptional regulator — —
Shewanella amazonensis SB2B 0.56 Sama_0371 nicotinate-nucleotide diphosphorylase (carboxylating) (RefSeq) 0.64 Sama_1324 cysB transcriptional regulator CysB (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.56 CSW01_12265 carboxylating nicotinate-nucleotide diphosphorylase 0.67 CSW01_09545 HTH-type transcriptional regulator CysB — —
Acinetobacter radioresistens SK82 0.56 MPMX26_00042 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.39 MPMX26_02171 HTH-type transcriptional regulator SsuR low > 36
Rahnella sp. WP5 0.55 EX31_RS03515 carboxylating nicotinate-nucleotide diphosphorylase 0.66 EX31_RS09890 HTH-type transcriptional regulator CysB 0.54 57
Shewanella loihica PV-4 0.55 Shew_3435 nicotinate-nucleotide pyrophosphorylase (RefSeq) 0.63 Shew_1624 cysB transcriptional regulator CysB (RefSeq) — —
Pectobacterium carotovorum WPP14 0.55 HER17_RS03250 carboxylating nicotinate-nucleotide diphosphorylase 0.66 HER17_RS10870 HTH-type transcriptional regulator CysB 0.81 73
Acinetobacter baumannii LAC-4 0.55 RR41_RS18680 carboxylating nicotinate-nucleotide diphosphorylase 0.40 RR41_RS04770 CysB family HTH-type transcriptional regulator — —
Dickeya dadantii 3937 0.55 DDA3937_RS17955 carboxylating nicotinate-nucleotide diphosphorylase 0.66 DDA3937_RS10540 HTH-type transcriptional regulator CysB low > 74
Dickeya dianthicola 67-19 0.55 HGI48_RS17890 carboxylating nicotinate-nucleotide diphosphorylase 0.66 HGI48_RS10540 HTH-type transcriptional regulator CysB low > 71
Rhodanobacter denitrificans MT42 0.54 LRK55_RS13510 carboxylating nicotinate-nucleotide diphosphorylase 0.35 LRK55_RS00690 LysR substrate-binding domain-containing protein low > 63
Klebsiella pneumoniae MKP103 0.54 KDGMDA_13080 carboxylating nicotinate-nucleotide diphosphorylase 0.65 KDGMDA_19620 HTH-type transcriptional regulator CysB — —
Shewanella sp. ANA-3 0.54 Shewana3_0422 nicotinate-nucleotide pyrophosphorylase [carboxylating] (RefSeq) 0.63 Shewana3_1731 cysB transcriptional regulator CysB (RefSeq) — —
Dickeya dianthicola ME23 0.54 DZA65_RS19035 carboxylating nicotinate-nucleotide diphosphorylase 0.66 DZA65_RS11020 HTH-type transcriptional regulator CysB 0.69 54
Rhodanobacter denitrificans FW104-10B01 0.54 LRK54_RS13795 carboxylating nicotinate-nucleotide diphosphorylase 0.35 LRK54_RS00915 LysR substrate-binding domain-containing protein low > 59
Alteromonas macleodii MIT1002 0.54 MIT1002_03008 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.66 MIT1002_02005 Cys regulon transcriptional activator — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF130 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.66 GFF2712 Cys regulon transcriptional activator CysB — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.53 GFF1217 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.48 GFF5044 Alkanesulfonate utilization operon LysR-family regulator CbI low > 90
Methylophilus sp. DMC18 0.53 GFF2544 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.46 GFF1021 HTH-type transcriptional regulator SsuR — —
Serratia liquefaciens MT49 0.52 IAI46_03530 carboxylating nicotinate-nucleotide diphosphorylase 0.66 IAI46_13965 HTH-type transcriptional regulator CysB — —
Ralstonia solanacearum IBSBF1503 0.52 RALBFv3_RS04730 nicotinate-nucleotide diphosphorylase (carboxylating) 0.47 RALBFv3_RS00100 CysB family HTH-type transcriptional regulator low > 76
Ralstonia solanacearum UW163 0.52 UW163_RS08940 nicotinate-nucleotide diphosphorylase (carboxylating) 0.47 UW163_RS13430 CysB family HTH-type transcriptional regulator — —
Ralstonia solanacearum PSI07 0.52 RPSI07_RS12655 nicotinate-nucleotide diphosphorylase (carboxylating) 0.46 RPSI07_RS17385 CysB family HTH-type transcriptional regulator low > 81
Ralstonia sp. UNC404CL21Col 0.52 ABZR87_RS00350 carboxylating nicotinate-nucleotide diphosphorylase 0.47 ABZR87_RS11555 CysB family HTH-type transcriptional regulator low > 80
Castellaniella sp019104865 MT123 0.52 ABCV34_RS03695 carboxylating nicotinate-nucleotide diphosphorylase 0.38 ABCV34_RS08230 CysB family HTH-type transcriptional regulator low > 48
Enterobacter sp. TBS_079 0.51 MPMX20_00800 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.66 MPMX20_02501 HTH-type transcriptional regulator CysB — —
Enterobacter asburiae PDN3 0.51 EX28DRAFT_3702 nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19) 0.66 EX28DRAFT_0946 Transcriptional regulator — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_03552 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.65 OHPLBJKB_02409 HTH-type transcriptional regulator CysB low > 74
Escherichia coli ECOR27 0.51 NOLOHH_02875 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.65 NOLOHH_20265 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli BL21 0.51 ECD_00108 quinolinate phosphoribosyltransferase 0.65 ECD_01251 N-acetylserine-responsive cysteine regulon transcriptional activator; autorepressor — —
Escherichia coli BW25113 0.51 b0109 nadC nicotinate-nucleotide pyrophosphorylase (NCBI) 0.65 b1275 cysB DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding (NCBI) — —
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS17015 nicotinate-nucleotide pyrophosphorylase 0.45 RR42_RS12245 transcriptional regulator low > 128
Escherichia coli ECRC98 0.51 JDDGAC_14125 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.65 JDDGAC_05145 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECOR38 0.51 HEPCGN_08510 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.65 HEPCGN_25600 cysB HTH-type transcriptional regulator CysB 0.50 58
Escherichia coli ECRC62 0.51 BNILDI_08735 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.65 BNILDI_18415 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC100 0.51 OKFHMN_10530 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.65 OKFHMN_02600 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC102 0.51 NIAGMN_08380 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.65 NIAGMN_26770 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC101 0.51 MCAODC_01045 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.65 MCAODC_15665 cysB HTH-type transcriptional regulator CysB — —
Escherichia coli Nissle 1917 0.51 ECOLIN_RS00585 carboxylating nicotinate-nucleotide diphosphorylase 0.65 ECOLIN_RS07680 HTH-type transcriptional regulator CysB low > 55
Escherichia fergusonii Becca 0.51 EFB2_03940 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.65 EFB2_02652 HTH-type transcriptional regulator CysB — —
Escherichia coli ECRC99 0.51 KEDOAH_17625 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.65 KEDOAH_26165 cysB HTH-type transcriptional regulator CysB — —
Kangiella aquimarina DSM 16071 0.51 B158DRAFT_2135 nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19) 0.42 B158DRAFT_2455 Transcriptional regulator — —
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS03065 carboxylating nicotinate-nucleotide diphosphorylase 0.47 QEN71_RS22570 CysB family HTH-type transcriptional regulator low > 153
Acidovorax sp. GW101-3H11 0.50 Ac3H11_3838 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.44 Ac3H11_2403 Alkanesulfonate utilization operon LysR-family regulator CbI 0.66 51
Herbaspirillum seropedicae SmR1 0.50 HSERO_RS11070 nicotinate-nucleotide pyrophosphorylase 0.46 HSERO_RS08245 CysB family transcriptional regulator low > 78
Klebsiella michiganensis M5al 0.50 BWI76_RS04845 nicotinate-nucleotide pyrophosphorylase 0.65 BWI76_RS11930 LysR family transcriptional regulator CysB — —
Pantoea sp. MT58 0.49 IAI47_15845 carboxylating nicotinate-nucleotide diphosphorylase 0.66 IAI47_09240 HTH-type transcriptional regulator CysB low > 76
Paraburkholderia graminis OAS925 0.49 ABIE53_003293 nicotinate-nucleotide pyrophosphorylase (carboxylating) 0.47 ABIE53_001994 LysR family cys regulon transcriptional activator 0.31 27
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS15645 nicotinate-nucleotide pyrophosphorylase 0.47 BPHYT_RS08810 CysB family transcriptional regulator low > 109
Pantoea agglomerans CFBP13505 P0401 0.49 PagCFBP13505_RS13155 carboxylating nicotinate-nucleotide diphosphorylase 0.66 PagCFBP13505_RS06945 HTH-type transcriptional regulator CysB — —
Ralstonia solanacearum GMI1000 0.49 RS_RS12290 nicotinate-nucleotide diphosphorylase (carboxylating) 0.46 RS_RS06760 CysB family HTH-type transcriptional regulator 0.44 56
Erwinia tracheiphila HP pepo 2.2 0.48 IJEDHG_05835 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.65 IJEDHG_23720 cysB HTH-type transcriptional regulator CysB — —
Variovorax sp. OAS795 0.48 ABID97_RS07410 carboxylating nicotinate-nucleotide diphosphorylase 0.46 ABID97_RS02980 CysB family HTH-type transcriptional regulator low > 91
Erwinia tracheiphila SCR3 0.48 LU632_RS03040 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.65 LU632_RS12550 cysB HTH-type transcriptional regulator CysB — —
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_04070 nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.47 H281DRAFT_00782 transcriptional regulator, LysR family low > 103
Rhodanobacter sp000427505 FW510-R12 0.46 LRK53_RS14805 carboxylating nicotinate-nucleotide diphosphorylase 0.36 LRK53_RS09195 LysR substrate-binding domain-containing protein low > 59
Variovorax sp. SCN45 0.45 GFF2574 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.47 GFF3358 Alkanesulfonate utilization operon LysR-family regulator Cbl low > 127
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.2009.1 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.29 Xcc-8004.1249.1 Transcriptional regulator 0.37 53
Lysobacter sp. OAE881 0.41 ABIE51_RS15405 carboxylating nicotinate-nucleotide diphosphorylase 0.33 ABIE51_RS15850 LysR family transcriptional regulator low > 62

Not shown: 35 genomes with orthologs for Psyr_0815 only; 3 genomes with orthologs for Psyr_2077 only