Conservation of cofitness between Psyr_0025 and Psyr_0848 in Pseudomonas syringae pv. syringae B728a

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0025 shikimate dehydrogenase 1.0 Psyr_0848 ketol-acid reductoisomerase 0.67 12
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0025 shikimate dehydrogenase 1.00 Psyr_0848 ketol-acid reductoisomerase 0.68 8
Pseudomonas simiae WCS417 0.83 PS417_00125 shikimate dehydrogenase 0.95 PS417_23800 ketol-acid reductoisomerase — —
Pseudomonas fluorescens FW300-N1B4 0.83 Pf1N1B4_1906 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.95 Pf1N1B4_2880 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.53 34
Pseudomonas fluorescens GW456-L13 0.82 PfGW456L13_644 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.95 PfGW456L13_1540 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.79 14
Pseudomonas fluorescens FW300-N2E3 0.82 AO353_10670 shikimate dehydrogenase 0.95 AO353_14505 ketol-acid reductoisomerase 0.77 7
Pseudomonas sp. RS175 0.81 PFR28_04655 Shikimate dehydrogenase (NADP(+)) 0.93 PFR28_03697 Ketol-acid reductoisomerase (NADP(+)) — —
Pseudomonas fluorescens SBW25 0.81 PFLU_RS00120 shikimate dehydrogenase 0.95 PFLU_RS25640 ketol-acid reductoisomerase — —
Pseudomonas fluorescens SBW25-INTG 0.81 PFLU_RS00120 shikimate dehydrogenase 0.95 PFLU_RS25640 ketol-acid reductoisomerase — —
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_11315 shikimate dehydrogenase 0.95 AO356_16180 ketol-acid reductoisomerase 0.50 37
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_4130 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.93 Pf6N2E2_5177 Ketol-acid reductoisomerase (EC 1.1.1.86) — —
Pseudomonas putida KT2440 0.77 PP_0074 shikimate 5-dehydrogenase 0.93 PP_4678 Ketol-acid reductoisomerase — —
Pseudomonas sp. S08-1 0.75 OH686_12485 Shikimate 5-dehydrogenase I alpha 0.95 OH686_08115 ketol-acid reductoisomerase 0.74 46
Pseudomonas stutzeri RCH2 0.73 Psest_0029 shikimate 5-dehydrogenase 0.91 Psest_1038 ketol-acid reductoisomerase — —
Dechlorosoma suillum PS 0.56 Dsui_0443 shikimate 5-dehydrogenase 0.77 Dsui_3527 ketol-acid reductoisomerase — —
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS01990 shikimate 5-dehydrogenase 0.74 HSERO_RS19010 ketol-acid reductoisomerase low > 78
Marinobacter adhaerens HP15 0.52 HP15_3750 shikimate dehydrogenase 0.84 HP15_533 ketol-acid reductoisomerase — —
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS27130 shikimate dehydrogenase 0.70 QEN71_RS24215 ketol-acid reductoisomerase 0.69 41
Paraburkholderia graminis OAS925 0.48 ABIE53_003560 shikimate dehydrogenase 0.70 ABIE53_001576 ketol-acid reductoisomerase — —
Paraburkholderia bryophila 376MFSha3.1 0.48 H281DRAFT_06291 shikimate dehydrogenase (EC 1.1.1.25) 0.70 H281DRAFT_04553 ketol-acid reductoisomerase — —
Ralstonia solanacearum GMI1000 0.48 RS_RS13890 shikimate dehydrogenase 0.72 RS_RS10410 ketol-acid reductoisomerase — —
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS16975 shikimate 5-dehydrogenase 0.71 BPHYT_RS06555 ketol-acid reductoisomerase 0.72 20
Ralstonia solanacearum UW163 0.48 UW163_RS07680 shikimate dehydrogenase 0.72 UW163_RS10685 ketol-acid reductoisomerase — —
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS05945 shikimate dehydrogenase 0.72 RALBFv3_RS03040 ketol-acid reductoisomerase — —
Ralstonia solanacearum PSI07 0.48 RPSI07_RS11300 shikimate dehydrogenase 0.72 RPSI07_RS14265 ketol-acid reductoisomerase — —
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS01605 shikimate dehydrogenase 0.72 ABZR87_RS14945 ketol-acid reductoisomerase — —
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS17645 shikimate dehydrogenase 0.72 RR42_RS05445 ketol-acid reductoisomerase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF5226 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.77 GFF4278 Ketol-acid reductoisomerase (EC 1.1.1.86) — —
Castellaniella sp019104865 MT123 0.40 ABCV34_RS11620 shikimate dehydrogenase 0.73 ABCV34_RS01220 ketol-acid reductoisomerase low > 48
Acidovorax sp. GW101-3H11 0.39 Ac3H11_4044 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.74 Ac3H11_527 Ketol-acid reductoisomerase (EC 1.1.1.86) — —
Variovorax sp. SCN45 0.37 GFF4456 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.72 GFF1161 Ketol-acid reductoisomerase (NADP(+)) (EC 1.1.1.86) — —
Acinetobacter radioresistens SK82 0.35 MPMX26_02748 Shikimate dehydrogenase (NADP(+)) 0.85 MPMX26_00474 Ketol-acid reductoisomerase (NADP(+)) low > 36
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.5020.1 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.52 Xcc-8004.1060.1 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.79 33
Variovorax sp. OAS795 0.34 ABID97_RS06300 shikimate dehydrogenase 0.72 ABID97_RS14895 ketol-acid reductoisomerase — —
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS14985 shikimate dehydrogenase 0.52 ABZR86_RS15940 ketol-acid reductoisomerase 0.97 18
Rhodanobacter denitrificans MT42 0.33 LRK55_RS08360 shikimate dehydrogenase 0.53 LRK55_RS09955 ketol-acid reductoisomerase low > 63
Rhodanobacter denitrificans FW104-10B01 0.33 LRK54_RS08595 shikimate dehydrogenase 0.53 LRK54_RS10315 ketol-acid reductoisomerase low > 59
Rhodanobacter sp. FW510-T8 0.32 OKGIIK_15365 aroE shikimate dehydrogenase 0.52 OKGIIK_13605 ilvC ketol-acid reductoisomerase low > 52
Lysobacter sp. OAE881 0.31 ABIE51_RS01815 shikimate dehydrogenase 0.53 ABIE51_RS17545 ketol-acid reductoisomerase 0.71 17
Dinoroseobacter shibae DFL-12 0.25 Dshi_3450 shikimate 5-dehydrogenase (RefSeq) 0.62 Dshi_2396 ketol-acid reductoisomerase (RefSeq) — —
Agrobacterium fabrum C58 0.23 Atu0003 shikimate 5-dehydrogenase 0.62 Atu2019 ketol-acid reductoisomerase — —
Phaeobacter inhibens DSM 17395 0.22 PGA1_c35150 shikimate dehydrogenase AroE 0.63 PGA1_c06580 ketol-acid reductoisomerase IlvC — —
Sinorhizobium meliloti 1021 0.22 SMc02791 shikimate 5-dehydrogenase 0.65 SMc04346 ketol-acid reductoisomerase — —
Methanococcus maripaludis S2 0.21 MMP_RS04855 shikimate dehydrogenase 0.50 MMP_RS03435 ketol-acid reductoisomerase — —
Desulfovibrio vulgaris Hildenborough JW710 0.21 DVU0115 aroE shikimate 5-dehydrogenase (TIGR) 0.56 DVU1378 ilvC ketol-acid reductoisomerase (TIGR) — —
Methanococcus maripaludis JJ 0.21 MMJJ_RS00280 shikimate dehydrogenase 0.50 MMJJ_RS01620 ketol-acid reductoisomerase — —
Rhodopseudomonas palustris CGA009 0.21 TX73_022410 shikimate dehydrogenase 0.66 TX73_010485 ketol-acid reductoisomerase — —
Azospirillum brasilense Sp245 0.20 AZOBR_RS01765 shikimate 5-dehydrogenase 0.67 AZOBR_RS06570 ketol-acid reductoisomerase — —
Rhodospirillum rubrum S1H 0.19 Rru_A3613 Quinate/Shikimate 5-dehydrogenase (NCBI) 0.67 Rru_A0469 Ketol-acid reductoisomerase (NCBI) — —
Desulfovibrio vulgaris Miyazaki F 0.19 DvMF_1962 shikimate 5-dehydrogenase (RefSeq) 0.57 DvMF_0155 ketol-acid reductoisomerase (RefSeq) — —
Caulobacter crescentus NA1000 Δfur 0.19 CCNA_00003 shikimate 5-dehydrogenase 0.66 CCNA_02204 ketol-acid reductoisomerase/2-dehydropantoate 2-reductase — —
Caulobacter crescentus NA1000 0.19 CCNA_00003 shikimate dehydrogenase (EC 1.1.1.25) (from data) 0.66 CCNA_02204 ketol-acid reductoisomerase/2-dehydropantoate 2-reductase — —
Rhizobium sp. OAE497 0.19 ABIE40_RS19250 shikimate dehydrogenase 0.64 ABIE40_RS11360 ketol-acid reductoisomerase — —
Azospirillum sp. SherDot2 0.18 MPMX19_02560 Shikimate dehydrogenase (NADP(+)) 0.67 MPMX19_01774 Ketol-acid reductoisomerase (NADP(+)) — —
Magnetospirillum magneticum AMB-1 0.18 AMB_RS23010 shikimate dehydrogenase 0.67 AMB_RS17750 ketol-acid reductoisomerase — —
Sphingomonas koreensis DSMZ 15582 0.16 Ga0059261_2194 shikimate dehydrogenase (EC 1.1.1.25) (from data) 0.65 Ga0059261_0066 ketol-acid reductoisomerase (EC 1.1.1.86) — —
Brevundimonas sp. GW460-12-10-14-LB2 0.15 A4249_RS13660 shikimate dehydrogenase 0.47 A4249_RS10025 ketol-acid reductoisomerase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.12 ABZR88_RS20055 shikimate dehydrogenase 0.22 ABZR88_RS11590 ketol-acid reductoisomerase — —

Not shown: 34 genomes with orthologs for Psyr_0025 only; 4 genomes with orthologs for Psyr_0848 only