Conservation of cofitness between Psyr_4573 and Psyr_0293 in Pseudomonas syringae pv. syringae B728a

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4573 Histidine triad (HIT) protein 1.0 Psyr_0293 Polyphosphate kinase 0.61 1
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4573 Histidine triad (HIT) protein 1.00 Psyr_0293 Polyphosphate kinase low > 86
Pseudomonas sp. RS175 0.99 PFR28_04038 Purine nucleoside phosphoramidase 0.92 PFR28_04345 Polyphosphate kinase low > 88
Pseudomonas fluorescens FW300-N2E2 0.98 Pf6N2E2_4831 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) 0.94 Pf6N2E2_4453 Polyphosphate kinase (EC 2.7.4.1) low > 103
Pseudomonas fluorescens FW300-N2C3 0.97 AO356_14465 zinc-binding protein 0.92 AO356_12895 polyphosphate kinase low > 104
Pseudomonas fluorescens FW300-N2E3 0.97 AO353_07180 zinc-binding protein 0.92 AO353_08885 polyphosphate kinase 0.26 55
Pseudomonas fluorescens FW300-N1B4 0.97 Pf1N1B4_2554 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) 0.92 Pf1N1B4_2208 Polyphosphate kinase (EC 2.7.4.1) low > 87
Pseudomonas fluorescens GW456-L13 0.94 PfGW456L13_1228 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) 0.93 PfGW456L13_874 Polyphosphate kinase (EC 2.7.4.1) low > 87
Pseudomonas fluorescens SBW25-INTG 0.94 PFLU_RS27340 histidine triad nucleotide-binding protein 0.92 PFLU_RS29095 polyphosphate kinase 1 low > 109
Pseudomonas fluorescens SBW25 0.94 PFLU_RS27340 histidine triad nucleotide-binding protein 0.92 PFLU_RS29095 polyphosphate kinase 1 low > 109
Pseudomonas putida KT2440 0.88 PP_0428 aminoacyl-adenylate hydrolase/purine nucleoside phosphoramidase 0.90 PP_5217 Polyphosphate kinase low > 96
Pseudomonas simiae WCS417 0.88 PS417_25685 zinc-binding protein 0.92 PS417_27435 polyphosphate kinase low > 88
Pseudomonas stutzeri RCH2 0.78 Psest_3643 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 0.85 Psest_3732 polyphosphate kinase 1 low > 67
Pseudomonas sp. S08-1 0.78 OH686_15165 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) 0.83 OH686_13995 polyphosphate kinase 1 low > 80
Marinobacter adhaerens HP15 0.65 HP15_3384 HIT (histidine triad) family protein 0.58 HP15_3334 polyphosphate kinase 0.42 10
Alteromonas macleodii MIT1002 0.64 MIT1002_00744 HIT-like protein 0.25 MIT1002_00872 Polyphosphate kinase 0.77 4
Synechococcus elongatus PCC 7942 0.61 Synpcc7942_1390 protein kinase C inhibitor 0.35 Synpcc7942_1566 ppk polyphosphate kinase low > 38
Rhodanobacter sp. FW510-T8 0.58 OKGIIK_05660 hinT histidine triad nucleotide-binding protein 0.68 OKGIIK_08995 ppk1 RNA degradosome polyphosphate kinase low > 52
Dyella japonica UNC79MFTsu3.2 0.56 ABZR86_RS06230 histidine triad nucleotide-binding protein 0.70 ABZR86_RS07490 polyphosphate kinase 1 low > 74
Rhodanobacter denitrificans FW104-10B01 0.55 LRK54_RS01245 histidine triad nucleotide-binding protein 0.69 LRK54_RS16000 polyphosphate kinase 1 low > 59
Rhodanobacter denitrificans MT42 0.54 LRK55_RS01015 histidine triad nucleotide-binding protein 0.69 LRK55_RS15755 polyphosphate kinase 1 low > 63
Lysobacter sp. OAE881 0.51 ABIE51_RS14005 histidine triad nucleotide-binding protein 0.49 ABIE51_RS14230 polyphosphate kinase 1 low > 62
Serratia liquefaciens MT49 0.49 IAI46_09880 purine nucleoside phosphoramidase 0.26 IAI46_18915 polyphosphate kinase 1 low > 86
Shewanella loihica PV-4 0.49 Shew_1731 histidine triad (HIT) protein (RefSeq) 0.24 Shew_3079 polyphosphate kinase (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_09495 histidine triad nucleotide-binding protein 0.25 CSW01_03780 polyphosphate kinase 1 low > 62
Shewanella amazonensis SB2B 0.49 Sama_1448 HIT family protein (RefSeq) 0.24 Sama_2011 polyphosphate kinase (RefSeq) low > 62
Shewanella sp. ANA-3 0.49 Shewana3_2507 histidine triad (HIT) protein (RefSeq) 0.24 Shewana3_2417 polyphosphate kinase (RefSeq) low > 73
Klebsiella michiganensis M5al 0.48 BWI76_RS11145 histidine triad nucleotide-binding protein 0.26 BWI76_RS20995 RNA degradosome polyphosphate kinase — —
Pectobacterium carotovorum WPP14 0.48 HER17_RS08705 purine nucleoside phosphoramidase 0.26 HER17_RS06425 polyphosphate kinase 1 low > 75
Variovorax sp. OAS795 0.47 ABID97_RS23085 histidine triad nucleotide-binding protein 0.40 ABID97_RS14575 polyphosphate kinase 1 low > 91
Dickeya dianthicola 67-19 0.47 HGI48_RS13135 purine nucleoside phosphoramidase 0.26 HGI48_RS15225 polyphosphate kinase 1 low > 71
Dickeya dadantii 3937 0.47 DDA3937_RS13070 purine nucleoside phosphoramidase 0.26 DDA3937_RS15150 polyphosphate kinase 1 low > 74
Rahnella sp. WP5 0.47 EX31_RS24480 purine nucleoside phosphoramidase 0.26 EX31_RS22680 polyphosphate kinase 1 low > 89
Dickeya dianthicola ME23 0.47 DZA65_RS13605 purine nucleoside phosphoramidase 0.26 DZA65_RS16045 polyphosphate kinase 1 low > 75
Variovorax sp. SCN45 0.47 GFF5361 FIG146285: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 0.40 GFF1089 Polyphosphate kinase (EC 2.7.4.1) low > 127
Kangiella aquimarina DSM 16071 0.47 B158DRAFT_0741 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 0.49 B158DRAFT_2312 polyphosphate kinase 1 low > 40
Enterobacter asburiae PDN3 0.46 EX28DRAFT_1827 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 0.26 EX28DRAFT_0166 polyphosphate kinase 1 0.71 41
Acidovorax sp. GW101-3H11 0.46 Ac3H11_4739 FIG146285: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 0.40 Ac3H11_452 Polyphosphate kinase (EC 2.7.4.1) low > 79
Pantoea sp. MT58 0.46 IAI47_12015 purine nucleoside phosphoramidase 0.26 IAI47_05155 polyphosphate kinase 1 low > 76
Escherichia coli ECRC98 0.45 JDDGAC_07185 hinT purine nucleoside phosphoramidase 0.27 JDDGAC_25745 ppk1 polyphosphate kinase 1 — —
Escherichia coli ECRC101 0.45 MCAODC_22885 hinT purine nucleoside phosphoramidase 0.27 MCAODC_12330 ppk1 polyphosphate kinase 1 low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF3386 YcfF/hinT protein: a purine nucleoside phosphoramidase 0.26 GFF2167 Polyphosphate kinase (EC 2.7.4.1) low > 78
Escherichia coli ECRC100 0.45 OKFHMN_03525 hinT purine nucleoside phosphoramidase 0.27 OKFHMN_21800 ppk1 polyphosphate kinase 1 — —
Escherichia coli ECOR38 0.45 HEPCGN_23960 hinT purine nucleoside phosphoramidase 0.27 HEPCGN_20965 ppk1 polyphosphate kinase 1 low > 87
Escherichia fergusonii Becca 0.45 EFB2_02872 Purine nucleoside phosphoramidase 0.26 EFB2_01397 Polyphosphate kinase low > 86
Escherichia coli ECRC62 0.45 BNILDI_19215 hinT purine nucleoside phosphoramidase 0.27 BNILDI_12260 ppk1 polyphosphate kinase 1 low > 75
Escherichia coli BL21 0.45 ECD_01099 purine nucleoside phosphoramidase, dadA activator protein 0.27 ECD_02393 polyphosphate kinase, component of RNA degradosome — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_02563 Purine nucleoside phosphoramidase 0.27 OHPLBJKB_01225 Polyphosphate kinase — —
Escherichia coli BW25113 0.45 b1103 ycfF orf, hypothetical protein (VIMSS) 0.27 b2501 ppk polyphosphate kinase (NCBI) low > 76
Escherichia coli ECRC99 0.45 KEDOAH_24230 hinT purine nucleoside phosphoramidase 0.27 KEDOAH_06420 ppk1 polyphosphate kinase 1 — —
Escherichia coli ECOR27 0.45 NOLOHH_21055 hinT purine nucleoside phosphoramidase 0.27 NOLOHH_13450 ppk1 polyphosphate kinase 1 low > 75
Escherichia coli ECRC102 0.45 NIAGMN_24305 hinT purine nucleoside phosphoramidase 0.27 NIAGMN_19570 ppk1 polyphosphate kinase 1 — —
Cupriavidus basilensis FW507-4G11 0.45 RR42_RS18865 hydrolase 0.49 RR42_RS31480 polyphosphate kinase low > 128
Enterobacter sp. TBS_079 0.45 MPMX20_01784 Purine nucleoside phosphoramidase 0.26 MPMX20_03356 Polyphosphate kinase low > 85
Escherichia coli Nissle 1917 0.44 ECOLIN_RS06370 purine nucleoside phosphoramidase 0.27 ECOLIN_RS14200 polyphosphate kinase 1 — —
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.4011.1 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) 0.47 Xcc-8004.4064.1 Polyphosphate kinase (EC 2.7.4.1) 0.33 48
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS20300 HIT family hydrolase 0.47 HSERO_RS06305 polyphosphate kinase — —
Erwinia tracheiphila SCR3 0.44 LU632_RS14775 hinT purine nucleoside phosphoramidase 0.25 LU632_RS08260 ppk1 polyphosphate kinase 1 low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.44 GFF1304 FIG146285: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 0.41 GFF4226 Polyphosphate kinase (EC 2.7.4.1) low > 90
Dechlorosoma suillum PS 0.43 Dsui_1421 HIT family hydrolase, diadenosine tetraphosphate hydrolase 0.50 Dsui_2814 polyphosphate kinase 1 low > 51
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS27815 histidine triad nucleotide-binding protein 0.46 QEN71_RS04860 polyphosphate kinase 1 0.39 118
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_05663 histidine triad (HIT) family protein 0.45 H281DRAFT_04418 polyphosphate kinase low > 103
Castellaniella sp019104865 MT123 0.41 ABCV34_RS11265 histidine triad nucleotide-binding protein 0.45 ABCV34_RS15580 polyphosphate kinase 1 — —
Paraburkholderia graminis OAS925 0.41 ABIE53_003691 histidine triad (HIT) family protein 0.45 ABIE53_002988 polyphosphate kinase low > 113
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS17660 HIT family hydrolase 0.46 BPHYT_RS14110 polyphosphate kinase low > 109
Rhodospirillum rubrum S1H 0.39 Rru_A3592 Histidine triad (HIT) protein (NCBI) 0.35 Rru_A2161 Polyphosphate kinase (NCBI) — —
Magnetospirillum magneticum AMB-1 0.36 AMB_RS22915 histidine triad nucleotide-binding protein 0.34 AMB_RS14295 RNA degradosome polyphosphate kinase low > 64
Dinoroseobacter shibae DFL-12 0.35 Dshi_0679 histidine triad (HIT) protein (RefSeq) 0.33 Dshi_0740 Polyphosphate kinase (RefSeq) low > 64
Bifidobacterium breve UCC2003 0.35 BBR_RS15155 histidine triad nucleotide-binding protein 0.36 BBR_RS19645 RNA degradosome polyphosphate kinase low > 34
Azospirillum brasilense Sp245 0.33 AZOBR_RS01695 hypothetical protein 0.32 AZOBR_RS16235 polyphosphate kinase low > 97
Sphingomonas koreensis DSMZ 15582 0.33 Ga0059261_1052 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 0.33 Ga0059261_0225 polyphosphate kinase 1 low > 68
Azospirillum sp. SherDot2 0.32 MPMX19_02540 Purine nucleoside phosphoramidase 0.32 MPMX19_01149 Polyphosphate kinase low > 112

Not shown: 6 genomes with orthologs for Psyr_4573 only; 25 genomes with orthologs for Psyr_0293 only