Conservation of cofitness between Psyr_2519 and Psyr_0247 in Pseudomonas syringae pv. syringae B728a

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_2519 Aldo/keto reductase 1.0 Psyr_0247 glycine cleavage system H protein 0.45 3
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_2519 Aldo/keto reductase 1.00 Psyr_0247 glycine cleavage system H protein low > 86
Pseudomonas fluorescens FW300-N2E2 0.82 Pf6N2E2_1615 Aldo-keto reductase 0.80 Pf6N2E2_4486 Glycine cleavage system H protein low > 103
Pseudomonas fluorescens FW300-N2C3 0.80 AO356_23370 aldo/keto reductase 0.80 AO356_13040 glycine cleavage system protein H low > 104
Pseudomonas sp. RS175 0.78 PFR28_02364 Aldo-keto reductase YhdN 0.83 PFR28_04315 Glycine cleavage system H protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.71 AO353_23805 aldo/keto reductase 0.72 AO353_08730 glycine cleavage system protein H low > 101
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_4693 Oxidoreductase 0.71 Pf1N1B4_2235 Glycine cleavage system H protein low > 87
Pseudomonas simiae WCS417 0.70 PS417_14445 aldo/keto reductase 0.81 PS417_27250 glycine cleavage system protein H low > 88
Pseudomonas fluorescens SBW25 0.69 PFLU_RS16375 aldo/keto reductase 0.77 PFLU_RS28910 glycine cleavage system protein GcvH low > 109
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS16375 aldo/keto reductase 0.77 PFLU_RS28910 glycine cleavage system protein GcvH low > 109
Pectobacterium carotovorum WPP14 0.69 HER17_RS18075 aldo/keto reductase 0.58 HER17_RS18000 glycine cleavage system protein GcvH low > 75
Serratia liquefaciens MT49 0.67 IAI46_02855 aldo/keto reductase 0.58 IAI46_20855 glycine cleavage system protein GcvH low > 86
Pseudomonas fluorescens GW456-L13 0.65 PfGW456L13_2966 Aldo-keto reductase 0.81 PfGW456L13_903 Glycine cleavage system H protein low > 87
Dickeya dianthicola 67-19 0.65 HGI48_RS03345 aldo/keto reductase 0.57 HGI48_RS03395 glycine cleavage system protein GcvH low > 71
Xanthomonas campestris pv. campestris strain 8004 0.65 Xcc-8004.4648.1 Oxidoreductase 0.55 Xcc-8004.1568.1 Glycine cleavage system H protein low > 74
Rhodanobacter sp. FW510-T8 0.64 OKGIIK_13390 aldo/keto reductase 0.60 OKGIIK_01310 gcvH glycine cleavage system protein GcvH low > 52
Herbaspirillum seropedicae SmR1 0.64 HSERO_RS16785 aldo/keto reductase 0.49 HSERO_RS07915 glycine cleavage system protein H low > 78
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS10515 aldo/keto reductase 0.56 LRK54_RS05505 glycine cleavage system protein GcvH low > 59
Rhodanobacter denitrificans MT42 0.64 LRK55_RS10155 aldo/keto reductase 0.56 LRK55_RS05275 glycine cleavage system protein GcvH low > 63
Dickeya dianthicola ME23 0.64 DZA65_RS03390 aldo/keto reductase 0.57 DZA65_RS03440 glycine cleavage system protein GcvH low > 75
Pontibacter actiniarum KMM 6156, DSM 19842 0.63 CA264_05950 aldo/keto reductase 0.44 CA264_14555 glycine cleavage system protein H — —
Dickeya dadantii 3937 0.63 DDA3937_RS03195 aldo/keto reductase 0.51 DDA3937_RS03250 glycine cleavage system protein GcvH low > 74
Rahnella sp. WP5 0.63 EX31_RS04125 aldo/keto reductase 0.58 EX31_RS21515 glycine cleavage system protein GcvH low > 89
Dyella japonica UNC79MFTsu3.2 0.62 ABZR86_RS16200 aldo/keto reductase 0.60 ABZR86_RS18880 glycine cleavage system protein GcvH low > 74
Brevundimonas sp. GW460-12-10-14-LB2 0.59 A4249_RS07260 aldo/keto reductase 0.47 A4249_RS09330 glycine cleavage system protein GcvH low > 48
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS20325 aldo/keto reductase 0.63 RR42_RS20065 glycine cleavage system protein H low > 128
Azospirillum sp. SherDot2 0.56 MPMX19_01216 Aldo-keto reductase IolS 0.43 MPMX19_01030 Glycine cleavage system H protein low > 112
Agrobacterium fabrum C58 0.54 Atu0260 aldo-keto reductase 0.49 Atu1463 glycine cleavage system component H low > 89
Lysobacter sp. OAE881 0.52 ABIE51_RS11290 aldo/keto reductase 0.55 ABIE51_RS16360 glycine cleavage system protein GcvH low > 62
Rhodopseudomonas palustris CGA009 0.51 TX73_015655 aldo/keto reductase 0.43 TX73_019930 glycine cleavage system protein GcvH low > 86
Rhodospirillum rubrum S1H 0.47 Rru_A1059 Aldo/keto reductase (NCBI) 0.49 Rru_A3050 Glycine cleavage H-protein (NCBI) low > 58
Caulobacter crescentus NA1000 Δfur 0.47 CCNA_03097 aldo/keto reductase family protein 0.40 CCNA_03464 glycine cleavage system H protein low > 67
Caulobacter crescentus NA1000 0.47 CCNA_03097 aldo/keto reductase family protein 0.40 CCNA_03464 glycine cleavage system H protein 0.42 12
Rhizobium sp. OAE497 0.47 ABIE40_RS04910 aldo/keto reductase 0.47 ABIE40_RS09945 glycine cleavage system protein GcvH low > 107
Escherichia coli ECOR38 0.46 HEPCGN_07675 pdxI aldo/keto reductase 0.63 HEPCGN_18815 gcvH glycine cleavage system protein GcvH low > 87
Escherichia coli Nissle 1917 0.45 ECOLIN_RS26205 aldo/keto reductase 0.62 ECOLIN_RS16170 glycine cleavage system protein GcvH — —
Variovorax sp. OAS795 0.45 ABID97_RS21725 aldo/keto reductase 0.45 ABID97_RS19650 glycine cleavage system protein GcvH — —
Acidovorax sp. GW101-3H11 0.45 Ac3H11_4133 Aldo-keto reductase 0.46 Ac3H11_166 Glycine cleavage system H protein low > 79
Escherichia fergusonii Becca 0.45 EFB2_03742 Aldo-keto reductase IolS 0.62 EFB2_00998 Glycine cleavage system H protein low > 86
Echinicola vietnamensis KMM 6221, DSM 17526 0.44 Echvi_4177 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 0.37 Echvi_4084 glycine cleavage system H protein low > 79
Ralstonia solanacearum GMI1000 0.44 RS_RS01075 aldo/keto reductase 0.59 RS_RS16505 glycine cleavage system protein H low > 80
Pantoea sp. MT58 0.44 IAI47_08360 aldo/keto reductase 0.63 IAI47_03770 glycine cleavage system protein GcvH low > 76
Variovorax sp. SCN45 0.43 GFF3107 Oxidoreductase, aldo/keto reductase family 0.46 GFF6477 Glycine cleavage system H protein — —
Azospirillum brasilense Sp245 0.43 AZOBR_RS21420 aldo/keto reductase 0.45 AZOBR_RS10465 glycine cleavage system protein H — —
Pedobacter sp. GW460-11-11-14-LB5 0.43 CA265_RS00435 aldo/keto reductase 0.42 CA265_RS18980 glycine cleavage system protein H — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.43 ABZR88_RS08510 aldo/keto reductase 0.41 ABZR88_RS00300 glycine cleavage system protein GcvH — —
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS08125 aldo/keto reductase 0.61 QEN71_RS29210 glycine cleavage system protein GcvH low > 153
Ralstonia solanacearum UW163 0.42 UW163_RS23080 aldo/keto reductase 0.60 UW163_RS04955 glycine cleavage system protein H — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF3816 Aldo-keto reductase 0.45 GFF5214 Glycine cleavage system H protein low > 90
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS22535 aldo/keto reductase 0.60 RALBFv3_RS08655 glycine cleavage system protein H low > 76
Enterobacter sp. TBS_079 0.42 MPMX20_00046 Aldo-keto reductase IolS 0.61 MPMX20_03763 Glycine cleavage system H protein low > 85
Castellaniella sp019104865 MT123 0.41 ABCV34_RS02780 aldo/keto reductase 0.48 ABCV34_RS08840 glycine cleavage system protein GcvH low > 48
Ralstonia solanacearum PSI07 0.41 RPSI07_RS00620 aldo/keto reductase 0.57 RPSI07_RS08580 glycine cleavage system protein H low > 81
Phocaeicola dorei CL03T12C01 0.37 ABI39_RS19255 aldo/keto reductase 0.47 ABI39_RS04240 glycine cleavage system protein GcvH low > 72
Bacteroides thetaiotaomicron VPI-5482 0.36 BT1115 aldo/keto reductase (NCBI ptt file) 0.49 BT2519 putative glycine cleavage system H protein (NCBI ptt file) low > 81
Klebsiella michiganensis M5al 0.36 BWI76_RS21735 aldehyde oxidase 0.59 BWI76_RS23875 glycine cleavage system protein H low > 92
Parabacteroides merdae CL09T00C40 0.36 HMPREF1078_RS08255 aldo/keto reductase 0.42 HMPREF1078_RS05930 glycine cleavage system protein GcvH low > 61
Phocaeicola vulgatus CL09T03C04 0.36 HMPREF1058_RS05460 aldo/keto reductase 0.47 HMPREF1058_RS12495 glycine cleavage system protein GcvH low > 67
Marinobacter adhaerens HP15 0.27 HP15_2827 oxidoreductase, aldo/keto reductase family 0.55 HP15_459 glycine cleavage H-protein, subgroup low > 73
Synechococcus elongatus PCC 7942 0.23 Synpcc7942_0026 hypothetical protein 0.43 Synpcc7942_2046 gcsH glycine cleavage system protein H low > 38
Ralstonia sp. UNC404CL21Col 0.23 ABZR87_RS04135 aldo/keto reductase 0.58 ABZR87_RS03930 glycine cleavage system protein GcvH low > 80
Bifidobacterium breve UCC2003 0.20 BBR_RS14120 aldo/keto reductase 0.33 BBR_RS12855 glycine cleavage system protein H low > 34
Mycobacterium tuberculosis H37Rv 0.16 Rv2298 Conserved protein 0.49 Rv1826 Probable glycine cleavage system H protein GcvH — —
Shewanella amazonensis SB2B 0.14 Sama_3147 aldo/keto reductase family oxidoreductase (RefSeq) 0.65 Sama_2720 glycine cleavage system protein H (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.14 MIT1002_03752 Oxidoreductase YdhF 0.58 MIT1002_02972 Glycine cleavage system H protein low > 70

Not shown: 1 genomes with orthologs for Psyr_2519 only; 34 genomes with orthologs for Psyr_0247 only