| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas fluorescens GW456-L13 | 1.0 | PfGW456L13_1852 | | Holliday junction DNA helicase RuvA | 1.0 | PfGW456L13_1528 | | C4-type zinc finger protein, DksA/TraR family | 0.49 | 9 |
| Pseudomonas fluorescens FW300-N2E3 | 0.96 | AO353_03585 | | ATP-dependent DNA helicase RuvA | 0.88 | AO353_14420 | | molecular chaperone DnaK | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.96 | Pf1N1B4_638 | | Holliday junction DNA helicase RuvA | 0.90 | Pf1N1B4_2862 | | C4-type zinc finger protein, DksA/TraR family | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.96 | Pf6N2E2_5536 | | Holliday junction DNA helicase RuvA | 0.76 | Pf6N2E2_5160 | | C4-type zinc finger protein, DksA/TraR family | low | > 103 |
| Pseudomonas sp. RS175 | 0.96 | PFR28_03413 | | Holliday junction ATP-dependent DNA helicase RuvA | 0.89 | PFR28_03714 | | RNA polymerase-binding transcription factor DksA | 0.26 | 49 |
| Pseudomonas fluorescens FW300-N2C3 | 0.95 | AO356_18020 | | ATP-dependent DNA helicase RuvA | 0.90 | AO356_16095 | | molecular chaperone DnaK | 0.25 | 101 |
| Pseudomonas fluorescens SBW25 | 0.92 | PFLU_RS24090 | | Holliday junction branch migration protein RuvA | 0.89 | PFLU_RS25715 | | RNA polymerase-binding protein DksA | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.92 | PFLU_RS24090 | | Holliday junction branch migration protein RuvA | 0.89 | PFLU_RS25715 | | RNA polymerase-binding protein DksA | 0.26 | 66 |
| Pseudomonas simiae WCS417 | 0.92 | PS417_22450 | | ATP-dependent DNA helicase RuvA | 0.89 | PS417_23875 | | molecular chaperone DnaK | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.85 | Psyr_1409 | | Holliday junction DNA helicase subunit RuvA | 0.87 | Psyr_0835 | | transcriptional regulator, TraR/DksA family | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.85 | Psyr_1409 | | Holliday junction DNA helicase subunit RuvA | 0.87 | Psyr_0835 | | transcriptional regulator, TraR/DksA family | — | — |
| Pseudomonas stutzeri RCH2 | 0.83 | Psest_1496 | | Holliday junction DNA helicase, RuvA subunit | 0.78 | Psest_1003 | | RNA polymerase-binding protein DksA | — | — |
| Pseudomonas putida KT2440 | 0.82 | PP_1216 | | Holliday junction ATP-dependent DNA helicase RuvA | 0.79 | PP_4693 | | RNA polymerase-binding transcription factor DksA | 0.25 | 33 |
| Pseudomonas sp. S08-1 | 0.81 | OH686_19130 | | Holliday junction DNA helicase RuvA | 0.81 | OH686_17280 | | RNA polymerase-binding protein DksA | — | — |
| Shewanella sp. ANA-3 | 0.57 | Shewana3_1956 | ruvA | Holliday junction DNA helicase RuvA (RefSeq) | 0.66 | Shewana3_3404 | | TraR/DksA family transcriptional regulator (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.57 | SO2430 | ruvA | Holliday junction DNA helicase RuvA (NCBI ptt file) | 0.66 | SO0874 | dksA | DnaK suppressor protein (NCBI ptt file) | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.55 | CSW01_09245 | | Holliday junction branch migration protein RuvA | 0.68 | CSW01_03155 | | RNA polymerase-binding transcription factor DksA | low | > 62 |
| Enterobacter asburiae PDN3 | 0.54 | EX28DRAFT_0695 | | Holliday junction DNA helicase subunit RuvA | 0.69 | EX28DRAFT_3734 | | transcriptional regulator, TraR/DksA family | — | — |
| Shewanella loihica PV-4 | 0.54 | Shew_2076 | | Holliday junction DNA helicase RuvA (RefSeq) | 0.69 | Shew_3129 | | TraR/DksA family transcriptional regulator (RefSeq) | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.54 | OHPLBJKB_01867 | | Holliday junction ATP-dependent DNA helicase RuvA | 0.69 | OHPLBJKB_03517 | | RNA polymerase-binding transcription factor DksA | — | — |
| Escherichia coli ECOR38 | 0.54 | HEPCGN_04690 | ruvA | Holliday junction branch migration protein RuvA | 0.69 | HEPCGN_08295 | dksA | RNA polymerase-binding protein DksA | — | — |
| Escherichia coli ECRC99 | 0.54 | KEDOAH_01825 | ruvA | Holliday junction branch migration protein RuvA | 0.69 | KEDOAH_17810 | dksA | RNA polymerase-binding protein DksA | — | — |
| Escherichia coli ECOR27 | 0.54 | NOLOHH_16725 | ruvA | Holliday junction branch migration protein RuvA | 0.69 | NOLOHH_02690 | dksA | RNA polymerase-binding protein DksA | — | — |
| Escherichia coli ECRC98 | 0.54 | JDDGAC_00855 | ruvA | Holliday junction branch migration protein RuvA | 0.69 | JDDGAC_13940 | dksA | RNA polymerase-binding protein DksA | — | — |
| Escherichia coli ECRC101 | 0.54 | MCAODC_19125 | ruvA | Holliday junction branch migration protein RuvA | 0.69 | MCAODC_00860 | dksA | RNA polymerase-binding protein DksA | — | — |
| Escherichia coli ECRC102 | 0.54 | NIAGMN_01780 | ruvA | Holliday junction branch migration protein RuvA | 0.69 | NIAGMN_08195 | dksA | RNA polymerase-binding protein DksA | — | — |
| Escherichia coli ECRC100 | 0.54 | OKFHMN_26280 | ruvA | Holliday junction branch migration protein RuvA | 0.69 | OKFHMN_10345 | dksA | RNA polymerase-binding protein DksA | — | — |
| Escherichia coli BW25113 | 0.53 | b1861 | ruvA | Holliday junction DNA helicase motor protein (NCBI) | 0.69 | b0145 | dksA | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | low | > 76 |
| Escherichia coli BL21 | 0.53 | ECD_01832 | | component of RuvABC resolvasome, regulatory subunit | 0.69 | ECD_00144 | | transcriptional regulator of rRNA transcription; DnaK suppressor protein | — | — |
| Escherichia coli Nissle 1917 | 0.53 | ECOLIN_RS10365 | | Holliday junction branch migration protein RuvA | 0.69 | ECOLIN_RS00815 | | RNA polymerase-binding protein DksA | — | — |
| Alteromonas macleodii MIT1002 | 0.53 | MIT1002_01332 | | Holliday junction ATP-dependent DNA helicase RuvA | 0.65 | MIT1002_03690 | | DnaK suppressor protein | — | — |
| Escherichia fergusonii Becca | 0.53 | EFB2_02081 | | Holliday junction ATP-dependent DNA helicase RuvA | 0.69 | EFB2_03899 | | RNA polymerase-binding transcription factor DksA | — | — |
| Escherichia coli ECRC62 | 0.53 | BNILDI_15515 | ruvA | Holliday junction branch migration protein RuvA | 0.69 | BNILDI_08980 | dksA | RNA polymerase-binding protein DksA | — | — |
| Klebsiella michiganensis M5al | 0.53 | BWI76_RS18150 | | Holliday junction branch migration protein RuvA | 0.68 | BWI76_RS05015 | | transcriptional regulator | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.52 | GFF1640 | | Holliday junction DNA helicase RuvA | 0.69 | GFF87 | | C4-type zinc finger protein, DksA/TraR family | — | — |
| Enterobacter sp. TBS_079 | 0.52 | MPMX20_02767 | | Holliday junction ATP-dependent DNA helicase RuvA | 0.69 | MPMX20_00831 | | RNA polymerase-binding transcription factor DksA | low | > 85 |
| Shewanella amazonensis SB2B | 0.52 | Sama_1840 | ruvA | Holliday junction DNA helicase RuvA (RefSeq) | 0.67 | Sama_0780 | | TraR/DksA family transcriptional regulator (RefSeq) | — | — |
| Pantoea sp. MT58 | 0.52 | IAI47_08445 | | Holliday junction branch migration protein RuvA | 0.67 | IAI47_15635 | | RNA polymerase-binding protein DksA | low | > 76 |
| Erwinia amylovora T8 | 0.51 | OLJFJH_12855 | | Holliday junction branch migration protein RuvA | 0.68 | OLJFJH_00765 | | RNA polymerase-binding protein DksA | — | — |
| Marinobacter adhaerens HP15 | 0.51 | HP15_2041 | | Holliday junction ATP-dependent DNA helicase RuvA | 0.66 | HP15_332 | | transcriptional regulator, TraR/DksA family | — | — |
| Kangiella aquimarina DSM 16071 | 0.51 | B158DRAFT_1125 | | Holliday junction DNA helicase subunit RuvA | 0.69 | B158DRAFT_0056 | | transcriptional regulator, TraR/DksA family | low | > 40 |
| Erwinia tracheiphila SCR3 | 0.51 | LU632_RS13415 | ruvA | Holliday junction branch migration protein RuvA | 0.69 | LU632_RS20080 | dksA | RNA polymerase-binding protein DksA | — | — |
| Rahnella sp. WP5 | 0.51 | EX31_RS11675 | | Holliday junction branch migration protein RuvA | 0.68 | EX31_RS03250 | | RNA polymerase-binding protein DksA | 0.41 | 73 |
| Pectobacterium carotovorum WPP14 | 0.47 | HER17_RS11845 | | Holliday junction branch migration protein RuvA | 0.69 | HER17_RS05580 | | RNA polymerase-binding protein DksA | — | — |
| Dickeya dadantii 3937 | 0.46 | DDA3937_RS10080 | | Holliday junction branch migration protein RuvA | 0.69 | DDA3937_RS15935 | | RNA polymerase-binding protein DksA | — | — |
| Serratia liquefaciens MT49 | 0.45 | IAI46_14625 | | Holliday junction branch migration protein RuvA | 0.69 | IAI46_21210 | | RNA polymerase-binding protein DksA | — | — |
| Dickeya dianthicola ME23 | 0.45 | DZA65_RS10525 | | Holliday junction branch migration protein RuvA | 0.68 | DZA65_RS17135 | | RNA polymerase-binding protein DksA | — | — |
| Dickeya dianthicola 67-19 | 0.45 | HGI48_RS10110 | | Holliday junction branch migration protein RuvA | 0.68 | HGI48_RS16050 | | RNA polymerase-binding protein DksA | — | — |
| Dechlorosoma suillum PS | 0.45 | Dsui_0485 | | Holliday junction DNA helicase, RuvA subunit | 0.57 | Dsui_2717 | | RNA polymerase-binding protein DksA | — | — |
| Burkholderia phytofirmans PsJN | 0.42 | BPHYT_RS16615 | | holliday junction ATP-dependent DNA helicase RuvA | 0.35 | BPHYT_RS01640 | | molecular chaperone DnaK | — | — |
| Castellaniella sp019104865 MT123 | 0.42 | ABCV34_RS07980 | | Holliday junction branch migration protein RuvA | 0.35 | ABCV34_RS13420 | | RNA polymerase-binding protein DksA | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.41 | RR42_RS02705 | | Holliday junction DNA helicase RuvA | 0.38 | RR42_RS01030 | | molecular chaperone DnaK | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.40 | QEN71_RS26795 | | Holliday junction branch migration protein RuvA | 0.35 | QEN71_RS00340 | | RNA polymerase-binding protein DksA | — | — |
| Ralstonia solanacearum GMI1000 | 0.40 | RS_RS02490 | | Holliday junction branch migration protein RuvA | 0.33 | RS_RS00230 | | RNA polymerase-binding protein DksA | — | — |
| Ralstonia sp. UNC404CL21Col | 0.40 | ABZR87_RS07625 | | Holliday junction branch migration protein RuvA | 0.34 | ABZR87_RS05100 | | RNA polymerase-binding protein DksA | 0.25 | 75 |
| Paraburkholderia graminis OAS925 | 0.40 | ABIE53_003494 | | Holliday junction DNA helicase RuvA | 0.35 | ABIE53_000423 | | DnaK suppressor protein | 0.42 | 4 |
| Ralstonia solanacearum UW163 | 0.40 | UW163_RS01915 | | Holliday junction branch migration protein RuvA | 0.34 | UW163_RS03935 | | RNA polymerase-binding protein DksA | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.40 | RALBFv3_RS11670 | | Holliday junction branch migration protein RuvA | 0.34 | RALBFv3_RS09645 | | RNA polymerase-binding protein DksA | — | — |
| Ralstonia solanacearum PSI07 | 0.39 | RPSI07_RS21550 | | Holliday junction branch migration protein RuvA | 0.36 | RPSI07_RS23720 | | RNA polymerase-binding protein DksA | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.39 | H281DRAFT_04254 | | Holliday junction DNA helicase subunit RuvA | 0.35 | H281DRAFT_02205 | | transcriptional regulator, TraR/DksA family | — | — |
| Herbaspirillum seropedicae SmR1 | 0.38 | HSERO_RS02090 | | Holliday junction DNA helicase RuvA | 0.38 | HSERO_RS00840 | | molecular chaperone DnaK | — | — |
| Rhodopseudomonas palustris CGA009 | 0.30 | TX73_005655 | | Holliday junction branch migration protein RuvA | 0.35 | TX73_020255 | | RNA polymerase-binding protein DksA | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.29 | Ga0059261_0820 | | Holliday junction DNA helicase subunit RuvA | 0.29 | Ga0059261_0274 | | transcriptional regulator, TraR/DksA family | — | — |
| Bosea sp. OAE506 | 0.29 | ABIE41_RS09475 | | Holliday junction branch migration protein RuvA | 0.33 | ABIE41_RS13460 | | RNA polymerase-binding protein DksA | — | — |
| Azospirillum sp. SherDot2 | 0.28 | MPMX19_00697 | | Holliday junction ATP-dependent DNA helicase RuvA | 0.34 | MPMX19_01492 | | RNA polymerase-binding transcription factor DksA | — | — |
| Magnetospirillum magneticum AMB-1 | 0.28 | AMB_RS16255 | | Holliday junction branch migration protein RuvA | 0.36 | AMB_RS19350 | | RNA polymerase-binding protein DksA | — | — |
| Azospirillum brasilense Sp245 | 0.28 | AZOBR_RS09045 | | Holliday junction DNA helicase RuvA | 0.35 | AZOBR_RS11245 | | molecular chaperone DnaK | — | — |
| Rhodospirillum rubrum S1H | 0.27 | Rru_A1088 | | DNA recombination protein RuvA (NCBI) | 0.33 | Rru_A2847 | | Transcriptional regulators, TraR/DksA family (NCBI) | — | — |
| Agrobacterium fabrum C58 | 0.27 | Atu3723 | | Holliday junction DNA helicase RuvA | 0.39 | Atu1359 | | dnaK deletion suppressor protein | — | — |
| Rhizobium sp. OAE497 | 0.27 | ABIE40_RS15745 | | Holliday junction branch migration protein RuvA | 0.40 | ABIE40_RS10345 | | RNA polymerase-binding protein DksA | low | > 107 |
| Dinoroseobacter shibae DFL-12 | 0.26 | Dshi_1104 | | Holliday junction DNA helicase RuvA (RefSeq) | 0.36 | Dshi_1884 | | transcriptional regulator, TraR/DksA family (RefSeq) | — | — |
| Sinorhizobium meliloti 1021 | 0.26 | SMc03966 | | Holliday junction DNA helicase RuvA | 0.40 | SMc00469 | | DnaK suppressor protein | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.26 | A4249_RS15860 | | Holliday junction branch migration protein RuvA | 0.36 | A4249_RS08530 | | RNA polymerase-binding protein DksA | — | — |
| Phaeobacter inhibens DSM 17395 | 0.25 | PGA1_c05860 | | holliday junction ATP-dependent DNA helicase RuvA | 0.35 | PGA1_c11040 | | dnaK suppressor protein DksA | low | > 62 |
| Caulobacter crescentus NA1000 Δfur | 0.23 | CCNA_03345 | | Holliday junction DNA helicase RuvA | 0.35 | CCNA_02663 | | DnaK suppressor protein DksA | — | — |
| Caulobacter crescentus NA1000 | 0.23 | CCNA_03345 | | Holliday junction DNA helicase RuvA | 0.35 | CCNA_02663 | | DnaK suppressor protein DksA | low | > 66 |
Not shown: 27 genomes with orthologs for PfGW456L13_1852 only; 0 genomes with orthologs for PfGW456L13_1528 only