Conservation of cofitness between PP_1909 and PP_2148 in Pseudomonas putida KT2440

74 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1909 putative septum formation protein 1.0 PP_2148 transcription-repair coupling factor 0.48 3
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_456 FIG146278: Maf/YceF/YhdE family protein 0.87 Pf1N1B4_3916 Transcription-repair coupling factor low > 87
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_5947 FIG146278: Maf/YceF/YhdE family protein 0.89 Pf6N2E2_2278 Transcription-repair coupling factor low > 103
Pseudomonas simiae WCS417 0.69 PS417_21465 septum formation inhibitor Maf 0.87 PS417_07635 transcription-repair coupling factor low > 88
Pseudomonas fluorescens GW456-L13 0.69 PfGW456L13_2100 FIG146278: Maf/YceF/YhdE family protein 0.87 PfGW456L13_4027 Transcription-repair coupling factor low > 87
Pseudomonas fluorescens FW300-N2E3 0.69 AO353_01390 septum formation inhibitor Maf 0.89 AO353_00435 transcription-repair coupling factor low > 101
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_20140 septum formation inhibitor Maf 0.89 AO356_02270 transcription-repair coupling factor 0.24 97
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS23080 septum formation inhibitor Maf 0.87 PFLU_RS07710 transcription-repair coupling factor low > 109
Pseudomonas sp. RS175 0.69 PFR28_03015 7-methyl-GTP pyrophosphatase 0.89 PFR28_01123 Transcription-repair-coupling factor low > 88
Pseudomonas fluorescens SBW25 0.69 PFLU_RS23080 septum formation inhibitor Maf 0.87 PFLU_RS07710 transcription-repair coupling factor low > 109
Pseudomonas sp. S08-1 0.65 OH686_22110 septum formation protein Maf 0.84 OH686_21990 transcription-repair coupling factor low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_1642 Maf-like protein 0.87 Psyr_1896 transcription-repair coupling factor low > 86
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_1642 Maf-like protein 0.87 Psyr_1896 transcription-repair coupling factor low > 86
Pseudomonas stutzeri RCH2 0.57 Psest_1683 MAF protein 0.85 Psest_1653 transcription-repair coupling factor (mfd) low > 67
Serratia liquefaciens MT49 0.49 IAI46_09760 septum formation inhibitor Maf 0.56 IAI46_10320 transcription-repair coupling factor low > 86
Enterobacter sp. TBS_079 0.49 MPMX20_01767 7-methyl-GTP pyrophosphatase 0.54 MPMX20_01795 Transcription-repair-coupling factor low > 85
Pectobacterium carotovorum WPP14 0.48 HER17_RS08620 Maf-like protein 0.55 HER17_RS08775 transcription-repair coupling factor low > 75
Vibrio cholerae E7946 ATCC 55056 0.48 CSW01_10125 maf-like protein 0.56 CSW01_09445 transcription-repair coupling factor 0.38 25
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF3369 FIG146278: Maf/YceF/YhdE family protein 0.55 GFF3397 Transcription-repair coupling factor low > 78
Marinobacter adhaerens HP15 0.47 HP15_2218 Maf-like protein 0.62 HP15_2257 transcription-repair-coupling factor low > 73
Enterobacter asburiae PDN3 0.46 EX28DRAFT_1843 MAF protein 0.54 EX28DRAFT_1816 transcription-repair coupling factor (mfd) low > 76
Escherichia coli ECRC62 0.46 BNILDI_19300 yceF 7-methyl-GTP pyrophosphatase 0.55 BNILDI_19160 mfd transcription-repair coupling factor — —
Escherichia coli ECOR27 0.46 NOLOHH_21140 yceF 7-methyl-GTP pyrophosphatase 0.55 NOLOHH_20995 mfd transcription-repair coupling factor low > 57
Escherichia coli ECRC98 0.46 JDDGAC_07270 yceF 7-methyl-GTP pyrophosphatase 0.55 JDDGAC_07130 mfd transcription-repair coupling factor — —
Escherichia coli ECOR38 0.46 HEPCGN_23870 yceF 7-methyl-GTP pyrophosphatase 0.55 HEPCGN_24015 mfd transcription-repair coupling factor low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_02579 Maf-like protein YceF 0.55 OHPLBJKB_02552 Transcription-repair-coupling factor low > 73
Escherichia coli ECRC101 0.46 MCAODC_22970 yceF 7-methyl-GTP pyrophosphatase 0.55 MCAODC_22830 mfd transcription-repair coupling factor — —
Escherichia coli ECRC102 0.46 NIAGMN_24220 yceF 7-methyl-GTP pyrophosphatase 0.55 NIAGMN_24360 mfd transcription-repair coupling factor — —
Escherichia coli ECRC101 0.46 OKFHMN_03610 yceF 7-methyl-GTP pyrophosphatase 0.55 OKFHMN_03470 mfd transcription-repair coupling factor — —
Escherichia fergusonii Becca 0.46 EFB2_02888 7-methyl-GTP pyrophosphatase 0.55 EFB2_02861 Transcription-repair-coupling factor low > 86
Escherichia coli ECRC99 0.46 KEDOAH_24145 yceF 7-methyl-GTP pyrophosphatase 0.55 KEDOAH_24285 mfd transcription-repair coupling factor — —
Erwinia tracheiphila SCR3 0.45 LU632_RS14850 Maf-like protein 0.54 LU632_RS14730 mfd transcription-repair coupling factor low > 74
Dickeya dadantii 3937 0.45 DDA3937_RS13150 septum formation inhibitor Maf 0.55 DDA3937_RS13000 transcription-repair coupling factor low > 74
Escherichia coli BL21 0.45 ECD_01083 m(7)GTP pyrophosphatase 0.55 ECD_01110 transcription-repair coupling factor low > 60
Escherichia coli BW25113 0.45 b1087 yceF orf, hypothetical protein (VIMSS) 0.55 b1114 mfd transcription-repair coupling factor (NCBI) low > 76
Pantoea sp. MT58 0.45 IAI47_12100 septum formation inhibitor Maf 0.55 IAI47_11975 transcription-repair coupling factor low > 76
Dickeya dianthicola 67-19 0.45 HGI48_RS13215 septum formation inhibitor Maf 0.55 HGI48_RS13065 transcription-repair coupling factor low > 71
Shewanella oneidensis MR-1 0.45 SO2782 maf protein, putative (NCBI ptt file) 0.55 SO2255 mfd transcription-repair coupling factor (NCBI ptt file) low > 76
Dickeya dianthicola ME23 0.45 DZA65_RS13685 septum formation inhibitor Maf 0.55 DZA65_RS13530 transcription-repair coupling factor low > 75
Klebsiella michiganensis M5al 0.45 BWI76_RS11060 septum formation inhibitor Maf 0.55 BWI76_RS11205 transcription-repair coupling factor 0.27 24
Shewanella sp. ANA-3 0.43 Shewana3_2564 maf protein (RefSeq) 0.55 Shewana3_2289 transcription-repair coupling factor (RefSeq) low > 73
Kangiella aquimarina DSM 16071 0.43 B158DRAFT_1759 MAF protein 0.54 B158DRAFT_1800 transcription-repair coupling factor low > 40
Acidovorax sp. GW101-3H11 0.43 Ac3H11_1584 Septum formation protein Maf 0.48 Ac3H11_328 Transcription-repair coupling factor — —
Rahnella sp. WP5 0.43 EX31_RS24405 septum formation inhibitor Maf 0.55 EX31_RS24520 transcription-repair coupling factor low > 89
Dechlorosoma suillum PS 0.42 Dsui_2442 MAF protein 0.48 Dsui_2385 transcription-repair coupling factor Mfd low > 51
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF3328 Septum formation protein Maf 0.49 GFF4934 Transcription-repair coupling factor — —
Lysobacter sp. OAE881 0.40 ABIE51_RS13975 Maf family nucleotide pyrophosphatase 0.54 ABIE51_RS14320 transcription-repair coupling factor low > 62
Xanthomonas campestris pv. campestris strain 8004 0.40 Xcc-8004.4001.1 FIG146278: Maf/YceF/YhdE family protein 0.53 Xcc-8004.1775.1 Transcription-repair coupling factor low > 74
Shewanella loihica PV-4 0.39 Shew_1597 maf protein (RefSeq) 0.55 Shew_1630 transcription-repair coupling factor (RefSeq) low > 60
Cupriavidus basilensis FW507-4G11 0.39 RR42_RS14130 septum formation inhibitor Maf 0.48 RR42_RS07845 transcription-repair coupling factor low > 128
Variovorax sp. OAS795 0.38 ABID97_RS08280 Maf family nucleotide pyrophosphatase 0.49 ABID97_RS17285 transcription-repair coupling factor — —
Variovorax sp. SCN45 0.37 GFF3853 Septum formation protein Maf 0.49 GFF412 Transcription-repair coupling factor — —
Shewanella amazonensis SB2B 0.36 Sama_1986 septum formation protein Maf (RefSeq) 0.55 Sama_1330 transcription-repair coupling factor (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.36 MIT1002_01727 Maf-like protein YceF 0.57 MIT1002_01646 Transcription-repair-coupling factor low > 70
Rhodanobacter sp. FW510-T8 0.36 OKGIIK_05685 7-methyl-GTP pyrophosphatase 0.54 OKGIIK_09105 mfd transcription-repair coupling factor low > 52
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS14400 septum formation protein Maf 0.49 RALBFv3_RS01445 transcription-repair coupling factor low > 76
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS04525 Maf-like protein 0.49 QEN71_RS22060 transcription-repair coupling factor low > 153
Paraburkholderia bryophila 376MFSha3.1 0.35 H281DRAFT_04345 septum formation protein 0.49 H281DRAFT_00880 transcription-repair coupling factor low > 103
Ralstonia solanacearum UW163 0.35 UW163_RS11865 septum formation protein Maf 0.49 UW163_RS14755 transcription-repair coupling factor — —
Acinetobacter radioresistens SK82 0.35 MPMX26_01735 7-methyl-GTP pyrophosphatase 0.52 MPMX26_01319 Transcription-repair-coupling factor low > 36
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS10115 Maf-like protein 0.50 ABZR87_RS13240 transcription-repair coupling factor — —
Ralstonia solanacearum PSI07 0.35 RPSI07_RS19060 septum formation protein Maf 0.48 RPSI07_RS16040 transcription-repair coupling factor — —
Rhodanobacter denitrificans MT42 0.35 LRK55_RS00990 Maf family protein 0.55 LRK55_RS01815 transcription-repair coupling factor low > 63
Paraburkholderia graminis OAS925 0.34 ABIE53_003053 septum formation protein 0.50 ABIE53_002095 transcription-repair coupling factor (superfamily II helicase) low > 113
Ralstonia solanacearum GMI1000 0.34 RS_RS05180 septum formation protein Maf 0.49 RS_RS08275 transcription-repair coupling factor — —
Rhodanobacter denitrificans FW104-10B01 0.34 LRK54_RS01215 Maf family nucleotide pyrophosphatase 0.55 LRK54_RS02040 transcription-repair coupling factor low > 59
Castellaniella sp019104865 MT123 0.34 ABCV34_RS08400 Maf family nucleotide pyrophosphatase 0.47 ABCV34_RS08660 transcription-repair coupling factor low > 48
Burkholderia phytofirmans PsJN 0.32 BPHYT_RS14455 septum formation protein Maf 0.49 BPHYT_RS09290 helicase low > 109
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS06200 Maf family nucleotide pyrophosphatase 0.56 ABZR86_RS21210 transcription-repair coupling factor low > 74
Herbaspirillum seropedicae SmR1 0.30 HSERO_RS09575 septum formation inhibitor Maf 0.49 HSERO_RS15180 transcription-repair coupling factor low > 78
Rhizobium sp. OAE497 0.21 ABIE40_RS19245 Maf-like protein 0.32 ABIE40_RS09310 transcription-repair coupling factor low > 107
Rhodospirillum rubrum S1H 0.20 Rru_A3614 Maf-like protein (NCBI) 0.33 Rru_A1726 Transcription-repair coupling factor (NCBI) low > 58
Agrobacterium fabrum C58 0.20 Atu0002 putative inhibitor of septum formation 0.33 Atu1778 transcription-repair coupling factor — —
Sinorhizobium meliloti 1021 0.19 SMc02792 Maf-like protein 0.32 SMc04450 transcription-repair coupling factor — —
Rhodopseudomonas palustris CGA009 0.18 TX73_001555 Maf family protein 0.33 TX73_013805 transcription-repair coupling factor — —

Not shown: 1 genomes with orthologs for PP_1909 only; 13 genomes with orthologs for PP_2148 only