Conservation of cofitness between PP_0850 and PP_1909 in Pseudomonas putida KT2440

74 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0850 Dual-specificity RNA methyltransferase RlmN 1.0 PP_1909 putative septum formation protein 0.35 4
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_06605 23S rRNA (adenine(2503)-C2)-methyltransferase 0.69 AO356_20140 septum formation inhibitor Maf low > 104
Pseudomonas fluorescens FW300-N2E2 0.88 Pf6N2E2_3181 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) 0.71 Pf6N2E2_5947 FIG146278: Maf/YceF/YhdE family protein — —
Pseudomonas sp. RS175 0.88 PFR28_00294 Dual-specificity RNA methyltransferase RlmN 0.69 PFR28_03015 7-methyl-GTP pyrophosphatase low > 88
Pseudomonas fluorescens FW300-N2E3 0.87 AO353_15875 23S rRNA (adenine(2503)-C2)-methyltransferase 0.69 AO353_01390 septum formation inhibitor Maf low > 101
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_4865 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) 0.69 PfGW456L13_2100 FIG146278: Maf/YceF/YhdE family protein low > 87
Pseudomonas fluorescens SBW25-INTG 0.87 PFLU_RS24815 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN 0.69 PFLU_RS23080 septum formation inhibitor Maf 0.20 96
Pseudomonas fluorescens SBW25 0.87 PFLU_RS24815 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN 0.69 PFLU_RS23080 septum formation inhibitor Maf low > 109
Pseudomonas simiae WCS417 0.87 PS417_23160 50S rRNA methyltransferase 0.69 PS417_21465 septum formation inhibitor Maf low > 88
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_857 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) 0.71 Pf1N1B4_456 FIG146278: Maf/YceF/YhdE family protein — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.86 Psyr_1245 23S rRNA m(2)A-2503 methyltransferase 0.62 Psyr_1642 Maf-like protein low > 86
Pseudomonas syringae pv. syringae B728a 0.86 Psyr_1245 23S rRNA m(2)A-2503 methyltransferase 0.62 Psyr_1642 Maf-like protein low > 86
Pseudomonas sp. S08-1 0.85 OH686_17515 23S rRNA (adenine(2503)-C(2))-methyltransferase 0.65 OH686_22110 septum formation protein Maf low > 80
Pseudomonas stutzeri RCH2 0.84 Psest_1259 23S rRNA m2A2503 methyltransferase 0.57 Psest_1683 MAF protein low > 67
Marinobacter adhaerens HP15 0.66 HP15_1490 conserved hypothetical protein 0.47 HP15_2218 Maf-like protein low > 73
Acinetobacter radioresistens SK82 0.60 MPMX26_00426 Dual-specificity RNA methyltransferase RlmN 0.35 MPMX26_01735 7-methyl-GTP pyrophosphatase low > 36
Kangiella aquimarina DSM 16071 0.57 B158DRAFT_1149 23S rRNA m2A2503 methyltransferase 0.43 B158DRAFT_1759 MAF protein low > 40
Lysobacter sp. OAE881 0.56 ABIE51_RS09415 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN 0.40 ABIE51_RS13975 Maf family nucleotide pyrophosphatase low > 62
Escherichia coli ECOR38 0.56 HEPCGN_20830 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.46 HEPCGN_23870 yceF 7-methyl-GTP pyrophosphatase low > 85
Escherichia coli BW25113 0.56 b2517 yfgB predicted enzyme (NCBI) 0.45 b1087 yceF orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECRC101 0.56 MCAODC_12240 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.46 MCAODC_22970 yceF 7-methyl-GTP pyrophosphatase — —
Escherichia coli ECRC99 0.56 KEDOAH_06510 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.46 KEDOAH_24145 yceF 7-methyl-GTP pyrophosphatase — —
Escherichia fergusonii Becca 0.56 EFB2_01373 Dual-specificity RNA methyltransferase RlmN 0.46 EFB2_02888 7-methyl-GTP pyrophosphatase low > 86
Escherichia coli ECRC101 0.56 OKFHMN_21710 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.46 OKFHMN_03610 yceF 7-methyl-GTP pyrophosphatase — —
Escherichia coli ECOR27 0.56 NOLOHH_13360 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.46 NOLOHH_21140 yceF 7-methyl-GTP pyrophosphatase low > 57
Escherichia coli ECRC102 0.56 NIAGMN_19480 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.46 NIAGMN_24220 yceF 7-methyl-GTP pyrophosphatase — —
Escherichia coli Nissle 1917 0.56 ECOLIN_RS14300 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.45 ECOLIN_RS06285 7-methyl-GTP pyrophosphatase low > 52
Escherichia coli ECRC62 0.56 BNILDI_12160 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.46 BNILDI_19300 yceF 7-methyl-GTP pyrophosphatase — —
Escherichia coli BL21 0.56 ECD_02409 dual specificity 23S rRNA m(2)A2503, tRNA m(2)A37 methyltransferase, SAM-dependent 0.45 ECD_01083 m(7)GTP pyrophosphatase low > 60
Escherichia coli ECRC98 0.56 JDDGAC_25385 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.46 JDDGAC_07270 yceF 7-methyl-GTP pyrophosphatase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_01192 Dual-specificity RNA methyltransferase RlmN 0.46 OHPLBJKB_02579 Maf-like protein YceF low > 73
Enterobacter asburiae PDN3 0.55 EX28DRAFT_0126 23S rRNA (adenine(2503)-C(2))-methyltransferase 0.46 EX28DRAFT_1843 MAF protein low > 76
Enterobacter sp. TBS_079 0.55 MPMX20_03395 Dual-specificity RNA methyltransferase RlmN 0.49 MPMX20_01767 7-methyl-GTP pyrophosphatase low > 85
Klebsiella michiganensis M5al 0.55 BWI76_RS21095 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.45 BWI76_RS11060 septum formation inhibitor Maf low > 92
Dickeya dadantii 3937 0.55 DDA3937_RS15480 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.45 DDA3937_RS13150 septum formation inhibitor Maf low > 74
Pectobacterium carotovorum WPP14 0.55 HER17_RS06085 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.48 HER17_RS08620 Maf-like protein low > 75
Serratia liquefaciens MT49 0.54 IAI46_19290 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.49 IAI46_09760 septum formation inhibitor Maf low > 86
Dickeya dianthicola ME23 0.54 DZA65_RS16665 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.45 DZA65_RS13685 septum formation inhibitor Maf low > 75
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS13155 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN 0.39 RR42_RS14130 septum formation inhibitor Maf — —
Dickeya dianthicola 67-19 0.54 HGI48_RS15590 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.45 HGI48_RS13215 septum formation inhibitor Maf low > 71
Shewanella sp. ANA-3 0.54 Shewana3_1226 hypothetical protein (RefSeq) 0.43 Shewana3_2564 maf protein (RefSeq) low > 73
Erwinia tracheiphila SCR3 0.54 LU632_RS17815 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.45 LU632_RS14850 Maf-like protein low > 74
Rahnella sp. WP5 0.54 EX31_RS20525 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.43 EX31_RS24405 septum formation inhibitor Maf low > 89
Shewanella oneidensis MR-1 0.54 SO3315 conserved hypothetical protein TIGR00048 (NCBI ptt file) 0.45 SO2782 maf protein, putative (NCBI ptt file) low > 76
Ralstonia sp. UNC404CL21Col 0.54 ABZR87_RS10900 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN 0.35 ABZR87_RS10115 Maf-like protein — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF2414 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) 0.47 GFF3369 FIG146278: Maf/YceF/YhdE family protein low > 78
Dechlorosoma suillum PS 0.54 Dsui_3145 23S rRNA m2A2503 methyltransferase 0.42 Dsui_2442 MAF protein — —
Ralstonia solanacearum PSI07 0.54 RPSI07_RS18115 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN 0.35 RPSI07_RS19060 septum formation protein Maf — —
Ralstonia solanacearum GMI1000 0.54 RS_RS06070 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN 0.34 RS_RS05180 septum formation protein Maf — —
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS15260 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN 0.35 RALBFv3_RS14400 septum formation protein Maf — —
Ralstonia solanacearum UW163 0.54 UW163_RS12725 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN 0.35 UW163_RS11865 septum formation protein Maf — —
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS00070 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN 0.34 LRK54_RS01215 Maf family nucleotide pyrophosphatase low > 59
Rhodanobacter denitrificans MT42 0.53 LRK55_RS18065 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN 0.35 LRK55_RS00990 Maf family protein low > 63
Shewanella amazonensis SB2B 0.53 Sama_2368 hypothetical protein (RefSeq) 0.36 Sama_1986 septum formation protein Maf (RefSeq) low > 62
Rhodanobacter sp. FW510-T8 0.53 OKGIIK_07140 rlmN 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN 0.36 OKGIIK_05685 7-methyl-GTP pyrophosphatase 0.53 2
Xanthomonas campestris pv. campestris strain 8004 0.53 Xcc-8004.2737.1 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) 0.40 Xcc-8004.4001.1 FIG146278: Maf/YceF/YhdE family protein low > 74
Shewanella loihica PV-4 0.53 Shew_1287 hypothetical protein (RefSeq) 0.39 Shew_1597 maf protein (RefSeq) low > 60
Pantoea sp. MT58 0.53 IAI47_05040 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.45 IAI47_12100 septum formation inhibitor Maf low > 76
Dyella japonica UNC79MFTsu3.2 0.53 ABZR86_RS05455 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN 0.31 ABZR86_RS06200 Maf family nucleotide pyrophosphatase low > 74
Vibrio cholerae E7946 ATCC 55056 0.53 CSW01_03930 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.48 CSW01_10125 maf-like protein low > 62
Paraburkholderia sabiae LMG 24235 0.53 QEN71_RS05965 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN 0.35 QEN71_RS04525 Maf-like protein 0.65 79
Paraburkholderia bryophila 376MFSha3.1 0.52 H281DRAFT_00514 23S rRNA m(2)A-2503 methyltransferase 0.35 H281DRAFT_04345 septum formation protein — —
Burkholderia phytofirmans PsJN 0.52 BPHYT_RS12590 dual-specificity RNA methyltransferase RlmN 0.32 BPHYT_RS14455 septum formation protein Maf low > 109
Paraburkholderia graminis OAS925 0.52 ABIE53_002744 23S rRNA (adenine2503-C2)-methyltransferase 0.34 ABIE53_003053 septum formation protein low > 113
Herbaspirillum seropedicae SmR1 0.51 HSERO_RS14810 50S rRNA methyltransferase 0.30 HSERO_RS09575 septum formation inhibitor Maf — —
Acidovorax sp. GW101-3H11 0.51 Ac3H11_1791 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) 0.43 Ac3H11_1584 Septum formation protein Maf — —
Alteromonas macleodii MIT1002 0.50 MIT1002_02791 Dual-specificity RNA methyltransferase RlmN 0.36 MIT1002_01727 Maf-like protein YceF low > 70
Hydrogenophaga sp. GW460-11-11-14-LB1 0.50 GFF4866 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) 0.41 GFF3328 Septum formation protein Maf — —
Variovorax sp. OAS795 0.49 ABID97_RS14210 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN 0.38 ABID97_RS08280 Maf family nucleotide pyrophosphatase — —
Variovorax sp. SCN45 0.49 GFF992 23S rRNA (adenine(2503)-C(2))-methyltransferase @ tRNA (adenine(37)-C(2))-methyltransferase (EC 2.1.1.192) 0.37 GFF3853 Septum formation protein Maf — —
Castellaniella sp019104865 MT123 0.49 ABCV34_RS02610 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN 0.34 ABCV34_RS08400 Maf family nucleotide pyrophosphatase low > 48
Agrobacterium fabrum C58 0.43 Atu2673 hypothetical protein 0.20 Atu0002 putative inhibitor of septum formation — —
Rhodopseudomonas palustris CGA009 0.42 TX73_002060 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN 0.18 TX73_001555 Maf family protein — —
Sinorhizobium meliloti 1021 0.41 SMc03831 hypothetical protein 0.19 SMc02792 Maf-like protein — —
Rhizobium sp. OAE497 0.41 ABIE40_RS18200 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN 0.21 ABIE40_RS19245 Maf-like protein low > 107

Not shown: 25 genomes with orthologs for PP_0850 only; 1 genomes with orthologs for PP_1909 only