Conservation of cofitness between PP_1672 and PP_1677 in Pseudomonas putida KT2440

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1672 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase 1.0 PP_1677 Adenosyl-cobyric acid synthase 0.68 6
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_5737 Cob(I)alamin adenosyltransferase (EC 2.5.1.17) 0.83 Pf6N2E2_5742 Cobyric acid synthase (EC 6.3.5.10)
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_02640 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.82 AO353_02615 cobyric acid synthase 0.50 7
Pseudomonas fluorescens FW300-N2C3 0.90 AO356_19135 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.80 AO356_19160 cobyric acid synthase 0.62 6
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_4243 Cob(I)alamin adenosyltransferase (EC 2.5.1.17) 0.81 PfGW456L13_4238 Cobyric acid synthase (EC 6.3.5.10) 0.35 11
Pseudomonas fluorescens SBW25-INTG 0.89 PFLU_RS22030 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.80 PFLU_RS22005 cobyric acid synthase 0.53 4
Pseudomonas fluorescens SBW25 0.89 PFLU_RS22030 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.80 PFLU_RS22005 cobyric acid synthase
Pseudomonas simiae WCS417 0.89 PS417_20065 Cob(I)yrinic acid a,c-diamide adenosyltransferase 0.80 PS417_20040 cobyric acid synthase
Pseudomonas fluorescens FW300-N1B4 0.88 Pf1N1B4_3706 Cob(I)alamin adenosyltransferase (EC 2.5.1.17) 0.81 Pf1N1B4_3711 Cobyric acid synthase (EC 6.3.5.10)
Pseudomonas sp. RS175 0.88 PFR28_03209 Corrinoid adenosyltransferase 0.81 PFR28_03204 Cobyric acid synthase 0.53 7
Pseudomonas syringae pv. syringae B728a ΔmexB 0.84 Psyr_3681 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.81 Psyr_3676 adenosylcobyric acid synthase (glutamine-hydrolysing) low > 86
Pseudomonas syringae pv. syringae B728a 0.84 Psyr_3681 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.81 Psyr_3676 adenosylcobyric acid synthase (glutamine-hydrolysing) 0.41 10
Pseudomonas stutzeri RCH2 0.75 Psest_3014 cob(I)alamin adenosyltransferase 0.81 Psest_3008 cobyric acid synthase CobQ low > 67
Pseudomonas sp. S08-1 0.74 OH686_04990 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.79 OH686_04965 cobyric acid synthase CobQ low > 80
Cupriavidus basilensis FW507-4G11 0.69 RR42_RS16125 Cob(I)yrinic acid a,c-diamide adenosyltransferase 0.69 RR42_RS16075 cobyric acid synthase low > 128
Ralstonia sp. UNC404CL21Col 0.66 ABZR87_RS00080 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.68 ABZR87_RS00040 cobyric acid synthase low > 80
Dyella japonica UNC79MFTsu3.2 0.60 ABZR86_RS10920 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.67 ABZR86_RS10900 cobyric acid synthase low > 74
Lysobacter sp. OAE881 0.58 ABIE51_RS04945 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.68 ABIE51_RS04965 cobyric acid synthase low > 62
Dechlorosoma suillum PS 0.58 Dsui_0532 cob(I)alamin adenosyltransferase 0.62 Dsui_0542 cobyric acid synthase CobQ low > 51
Rhodanobacter sp. FW510-T8 0.57 OKGIIK_05480 cobO cob(I)yrinic acid a,c-diamide adenosyltransferase 0.66 OKGIIK_05500 cobyric acid synthase low > 52
Bosea sp. OAE506 0.53 ABIE41_RS01765 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.38 ABIE41_RS03845 cobyric acid synthase
Azospirillum brasilense Sp245 0.53 AZOBR_RS09840 cobinamide adenolsyltransferase 0.47 AZOBR_RS09845 cobyric acid synthase 0.50 15
Rhodospirillum rubrum S1H 0.52 Rru_A3367 Cob(I)alamin adenosyltransferase (NCBI) 0.44 Rru_A3381 Cobyric acid synthase CobQ (NCBI) 0.64 32
Azospirillum sp. SherDot2 0.52 MPMX19_01024 Corrinoid adenosyltransferase 0.44 MPMX19_01025 Cobyric acid synthase
Shewanella loihica PV-4 0.50 Shew_0718 cob(I)yrinic acid a,c-diamide adenosyltransferase (RefSeq) 0.61 Shew_0717 cobyric acid synthase (RefSeq) 0.75 22
Vibrio cholerae E7946 ATCC 55056 0.50 CSW01_05290 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.63 CSW01_17810 cobyric acid synthase CobQ low > 62
Sinorhizobium meliloti 1021 0.50 SMc04302 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.43 SMc04309 cobyric acid synthase
Dinoroseobacter shibae DFL-12 0.50 Dshi_0157 cob(I)alamin adenosyltransferase (RefSeq) 0.39 Dshi_2096 cobyric acid synthase CobQ (RefSeq)
Rhizobium sp. OAE497 0.48 ABIE40_RS11150 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.43 ABIE40_RS11175 cobyric acid synthase 0.93 11
Shewanella oneidensis MR-1 0.48 SO1039 cobO cob(I)alamin adenosyltransferase (NCBI ptt file) 0.61 SO1038 cobQ cobyric acid synthase CobQ (NCBI ptt file) 0.82 6
Shewanella sp. ANA-3 0.48 Shewana3_3274 cob(I)yrinic acid a,c-diamide adenosyltransferase (RefSeq) 0.61 Shewana3_3275 cobyric acid synthase (RefSeq) low > 73
Synechococcus elongatus PCC 7942 0.47 Synpcc7942_0957 cobO cob(I)yrinic acid a,c-diamide adenosyltransferase 0.38 Synpcc7942_0211 cobQ cobyric acid synthase
Sphingomonas koreensis DSMZ 15582 0.47 Ga0059261_0621 cob(I)yrinic acid a,c-diamide adenosyltransferase (EC 2.5.1.17) 0.43 Ga0059261_0630 adenosylcobyric acid synthase (glutamine-hydrolysing) (EC 6.3.5.10) low > 68
Klebsiella michiganensis M5al 0.47 BWI76_RS08445 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.39 BWI76_RS23010 cobyric acid synthase CobQ low > 92
Phaeobacter inhibens DSM 17395 0.47 PGA1_c08200 cob(I)yrinic acid a,c-diamide adenosyltransferase CobO 0.41 PGA1_c24000 cobyric acid synthase CobQ
Shewanella amazonensis SB2B 0.46 Sama_0766 cob(I)yrinic acid a,c-diamide adenosyltransferase (RefSeq) 0.56 Sama_0765 cobyric acid synthase (RefSeq) low > 62
Rhodopseudomonas palustris CGA009 0.46 TX73_003710 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.43 TX73_003715 cobyric acid synthase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF2718 Cob(I)alamin adenosyltransferase (EC 2.5.1.17) 0.39 GFF3966 Cobyric acid synthase (EC 6.3.5.10) low > 78
Ralstonia solanacearum GMI1000 0.44 RS_RS20065 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.68 RS_RS12000 cobyric acid synthase 0.49 57
Agrobacterium fabrum C58 0.44 Atu2807 cob(I)alamin adenosyltransferase 0.40 Atu2808 cobyric acid synthase 0.77 3
Magnetospirillum magneticum AMB-1 0.44 AMB_RS22645 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.47 AMB_RS01485 cobyric acid synthase
Paraburkholderia bryophila 376MFSha3.1 0.43 H281DRAFT_06529 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.63 H281DRAFT_00146 adenosylcobyric acid synthase (glutamine-hydrolysing) 0.90 4
Paraburkholderia graminis OAS925 0.43 ABIE53_006184 cob(I)alamin adenosyltransferase 0.63 ABIE53_001255 adenosylcobyric acid synthase 0.95 3
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS24825 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase 0.63 BPHYT_RS04900 cobyric acid synthase
Ralstonia solanacearum PSI07 0.43 RPSI07_RS02200 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.67 RPSI07_RS12925 cobyric acid synthase low > 81
Ralstonia solanacearum UW163 0.42 UW163_RS18635 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.68 UW163_RS09225 cobyric acid synthase
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS20540 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.68 RALBFv3_RS04445 cobyric acid synthase 0.51 14
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS13260 cobinamide adenolsyltransferase 0.63 HSERO_RS13230 cobyric acid synthase 0.62 16
Paraburkholderia sabiae LMG 24235 0.41 QEN71_RS08695 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.62 QEN71_RS25095 cobyric acid synthase low > 153
Variovorax sp. SCN45 0.33 GFF444 Cob(I)alamin adenosyltransferase (EC 2.5.1.17) @ Cob(I)alamin adenosyltransferase (EC 2.5.1.17), clustered with cobalamin synthesis 0.32 GFF426 Cobyric acid synthase (EC 6.3.5.10) 0.72 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF3983 Cob(I)alamin adenosyltransferase (EC 2.5.1.17) 0.31 GFF3998 Cobyric acid synthase (EC 6.3.5.10) low > 90
Variovorax sp. OAS795 0.32 ABID97_RS17395 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.32 ABID97_RS17340 cobyric acid synthase low > 91
Acidovorax sp. GW101-3H11 0.32 Ac3H11_994 Cob(I)alamin adenosyltransferase (EC 2.5.1.17) 0.30 Ac3H11_999 Cobyric acid synthase (EC 6.3.5.10) low > 79
Mycobacterium tuberculosis H37Rv 0.28 Rv2849c Probable cob(I)alamin adenosyltransferase CobO (corrinoid adenosyltransferase) (corrinoid adotransferase activity) 0.35 Rv0255c Probable cobyric acid synthase CobQ1 low > 58
Fusobacterium nucleatum SB010 0.25 HUW76_00780 cob(I)yrinic acid a,c-diamide adenosyltransferase 0.39 HUW76_05230 cobyric acid synthase low > 35
Desulfovibrio vulgaris Miyazaki F 0.22 DvMF_0199 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP (RefSeq) 0.38 DvMF_2864 cobyric acid synthase (RefSeq)
Desulfovibrio vulgaris Hildenborough JW710 0.21 DVU1403 cobO cob(I)alamin adenosyltransferase (TIGR) 0.38 DVU0816 cobQ cobyric acid synthase CobQ (TIGR) 0.94 1

Not shown: 24 genomes with orthologs for PP_1672 only; 7 genomes with orthologs for PP_1677 only