Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pseudomonas putida KT2440 | 1.0 | PP_1672 | | cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase | 1.0 | PP_1677 | | Adenosyl-cobyric acid synthase | 0.68 | 6 |
Pseudomonas fluorescens FW300-N2E2 | 0.93 | Pf6N2E2_5737 | | Cob(I)alamin adenosyltransferase (EC 2.5.1.17) | 0.83 | Pf6N2E2_5742 | | Cobyric acid synthase (EC 6.3.5.10) | — | — |
Pseudomonas fluorescens FW300-N2E3 | 0.92 | AO353_02640 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | 0.82 | AO353_02615 | | cobyric acid synthase | 0.50 | 7 |
Pseudomonas fluorescens FW300-N2C3 | 0.90 | AO356_19135 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | 0.80 | AO356_19160 | | cobyric acid synthase | 0.62 | 6 |
Pseudomonas fluorescens GW456-L13 | 0.90 | PfGW456L13_4243 | | Cob(I)alamin adenosyltransferase (EC 2.5.1.17) | 0.81 | PfGW456L13_4238 | | Cobyric acid synthase (EC 6.3.5.10) | 0.35 | 11 |
Pseudomonas fluorescens SBW25-INTG | 0.89 | PFLU_RS22030 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | 0.80 | PFLU_RS22005 | | cobyric acid synthase | 0.53 | 4 |
Pseudomonas fluorescens SBW25 | 0.89 | PFLU_RS22030 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | 0.80 | PFLU_RS22005 | | cobyric acid synthase | — | — |
Pseudomonas simiae WCS417 | 0.89 | PS417_20065 | | Cob(I)yrinic acid a,c-diamide adenosyltransferase | 0.80 | PS417_20040 | | cobyric acid synthase | — | — |
Pseudomonas fluorescens FW300-N1B4 | 0.88 | Pf1N1B4_3706 | | Cob(I)alamin adenosyltransferase (EC 2.5.1.17) | 0.81 | Pf1N1B4_3711 | | Cobyric acid synthase (EC 6.3.5.10) | — | — |
Pseudomonas sp. RS175 | 0.88 | PFR28_03209 | | Corrinoid adenosyltransferase | 0.81 | PFR28_03204 | | Cobyric acid synthase | 0.53 | 7 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.84 | Psyr_3681 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | 0.81 | Psyr_3676 | | adenosylcobyric acid synthase (glutamine-hydrolysing) | low | > 86 |
Pseudomonas syringae pv. syringae B728a | 0.84 | Psyr_3681 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | 0.81 | Psyr_3676 | | adenosylcobyric acid synthase (glutamine-hydrolysing) | 0.41 | 10 |
Pseudomonas stutzeri RCH2 | 0.75 | Psest_3014 | | cob(I)alamin adenosyltransferase | 0.81 | Psest_3008 | | cobyric acid synthase CobQ | low | > 67 |
Pseudomonas sp. S08-1 | 0.74 | OH686_04990 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | 0.79 | OH686_04965 | | cobyric acid synthase CobQ | low | > 80 |
Cupriavidus basilensis FW507-4G11 | 0.69 | RR42_RS16125 | | Cob(I)yrinic acid a,c-diamide adenosyltransferase | 0.69 | RR42_RS16075 | | cobyric acid synthase | low | > 128 |
Ralstonia sp. UNC404CL21Col | 0.66 | ABZR87_RS00080 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | 0.68 | ABZR87_RS00040 | | cobyric acid synthase | low | > 80 |
Dyella japonica UNC79MFTsu3.2 | 0.60 | ABZR86_RS10920 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | 0.67 | ABZR86_RS10900 | | cobyric acid synthase | low | > 74 |
Lysobacter sp. OAE881 | 0.58 | ABIE51_RS04945 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | 0.68 | ABIE51_RS04965 | | cobyric acid synthase | low | > 62 |
Dechlorosoma suillum PS | 0.58 | Dsui_0532 | | cob(I)alamin adenosyltransferase | 0.62 | Dsui_0542 | | cobyric acid synthase CobQ | low | > 51 |
Rhodanobacter sp. FW510-T8 | 0.57 | OKGIIK_05480 | cobO | cob(I)yrinic acid a,c-diamide adenosyltransferase | 0.66 | OKGIIK_05500 | | cobyric acid synthase | low | > 52 |
Bosea sp. OAE506 | 0.53 | ABIE41_RS01765 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | 0.38 | ABIE41_RS03845 | | cobyric acid synthase | — | — |
Azospirillum brasilense Sp245 | 0.53 | AZOBR_RS09840 | | cobinamide adenolsyltransferase | 0.47 | AZOBR_RS09845 | | cobyric acid synthase | 0.50 | 15 |
Rhodospirillum rubrum S1H | 0.52 | Rru_A3367 | | Cob(I)alamin adenosyltransferase (NCBI) | 0.44 | Rru_A3381 | | Cobyric acid synthase CobQ (NCBI) | 0.64 | 32 |
Azospirillum sp. SherDot2 | 0.52 | MPMX19_01024 | | Corrinoid adenosyltransferase | 0.44 | MPMX19_01025 | | Cobyric acid synthase | — | — |
Shewanella loihica PV-4 | 0.50 | Shew_0718 | | cob(I)yrinic acid a,c-diamide adenosyltransferase (RefSeq) | 0.61 | Shew_0717 | | cobyric acid synthase (RefSeq) | 0.75 | 22 |
Vibrio cholerae E7946 ATCC 55056 | 0.50 | CSW01_05290 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | 0.63 | CSW01_17810 | | cobyric acid synthase CobQ | low | > 62 |
Sinorhizobium meliloti 1021 | 0.50 | SMc04302 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | 0.43 | SMc04309 | | cobyric acid synthase | — | — |
Dinoroseobacter shibae DFL-12 | 0.50 | Dshi_0157 | | cob(I)alamin adenosyltransferase (RefSeq) | 0.39 | Dshi_2096 | | cobyric acid synthase CobQ (RefSeq) | — | — |
Rhizobium sp. OAE497 | 0.48 | ABIE40_RS11150 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | 0.43 | ABIE40_RS11175 | | cobyric acid synthase | 0.93 | 11 |
Shewanella oneidensis MR-1 | 0.48 | SO1039 | cobO | cob(I)alamin adenosyltransferase (NCBI ptt file) | 0.61 | SO1038 | cobQ | cobyric acid synthase CobQ (NCBI ptt file) | 0.82 | 6 |
Shewanella sp. ANA-3 | 0.48 | Shewana3_3274 | | cob(I)yrinic acid a,c-diamide adenosyltransferase (RefSeq) | 0.61 | Shewana3_3275 | | cobyric acid synthase (RefSeq) | low | > 73 |
Synechococcus elongatus PCC 7942 | 0.47 | Synpcc7942_0957 | cobO | cob(I)yrinic acid a,c-diamide adenosyltransferase | 0.38 | Synpcc7942_0211 | cobQ | cobyric acid synthase | — | — |
Sphingomonas koreensis DSMZ 15582 | 0.47 | Ga0059261_0621 | | cob(I)yrinic acid a,c-diamide adenosyltransferase (EC 2.5.1.17) | 0.43 | Ga0059261_0630 | | adenosylcobyric acid synthase (glutamine-hydrolysing) (EC 6.3.5.10) | low | > 68 |
Klebsiella michiganensis M5al | 0.47 | BWI76_RS08445 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | 0.39 | BWI76_RS23010 | | cobyric acid synthase CobQ | low | > 92 |
Phaeobacter inhibens DSM 17395 | 0.47 | PGA1_c08200 | | cob(I)yrinic acid a,c-diamide adenosyltransferase CobO | 0.41 | PGA1_c24000 | | cobyric acid synthase CobQ | — | — |
Shewanella amazonensis SB2B | 0.46 | Sama_0766 | | cob(I)yrinic acid a,c-diamide adenosyltransferase (RefSeq) | 0.56 | Sama_0765 | | cobyric acid synthase (RefSeq) | low | > 62 |
Rhodopseudomonas palustris CGA009 | 0.46 | TX73_003710 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | 0.43 | TX73_003715 | | cobyric acid synthase | low | > 86 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.45 | GFF2718 | | Cob(I)alamin adenosyltransferase (EC 2.5.1.17) | 0.39 | GFF3966 | | Cobyric acid synthase (EC 6.3.5.10) | low | > 78 |
Ralstonia solanacearum GMI1000 | 0.44 | RS_RS20065 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | 0.68 | RS_RS12000 | | cobyric acid synthase | 0.49 | 57 |
Agrobacterium fabrum C58 | 0.44 | Atu2807 | | cob(I)alamin adenosyltransferase | 0.40 | Atu2808 | | cobyric acid synthase | 0.77 | 3 |
Magnetospirillum magneticum AMB-1 | 0.44 | AMB_RS22645 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | 0.47 | AMB_RS01485 | | cobyric acid synthase | — | — |
Paraburkholderia bryophila 376MFSha3.1 | 0.43 | H281DRAFT_06529 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | 0.63 | H281DRAFT_00146 | | adenosylcobyric acid synthase (glutamine-hydrolysing) | 0.90 | 4 |
Paraburkholderia graminis OAS925 | 0.43 | ABIE53_006184 | | cob(I)alamin adenosyltransferase | 0.63 | ABIE53_001255 | | adenosylcobyric acid synthase | 0.95 | 3 |
Burkholderia phytofirmans PsJN | 0.43 | BPHYT_RS24825 | | cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase | 0.63 | BPHYT_RS04900 | | cobyric acid synthase | — | — |
Ralstonia solanacearum PSI07 | 0.43 | RPSI07_RS02200 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | 0.67 | RPSI07_RS12925 | | cobyric acid synthase | low | > 81 |
Ralstonia solanacearum UW163 | 0.42 | UW163_RS18635 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | 0.68 | UW163_RS09225 | | cobyric acid synthase | — | — |
Ralstonia solanacearum IBSBF1503 | 0.42 | RALBFv3_RS20540 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | 0.68 | RALBFv3_RS04445 | | cobyric acid synthase | 0.51 | 14 |
Herbaspirillum seropedicae SmR1 | 0.42 | HSERO_RS13260 | | cobinamide adenolsyltransferase | 0.63 | HSERO_RS13230 | | cobyric acid synthase | 0.62 | 16 |
Paraburkholderia sabiae LMG 24235 | 0.41 | QEN71_RS08695 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | 0.62 | QEN71_RS25095 | | cobyric acid synthase | low | > 153 |
Variovorax sp. SCN45 | 0.33 | GFF444 | | Cob(I)alamin adenosyltransferase (EC 2.5.1.17) @ Cob(I)alamin adenosyltransferase (EC 2.5.1.17), clustered with cobalamin synthesis | 0.32 | GFF426 | | Cobyric acid synthase (EC 6.3.5.10) | 0.72 | 79 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.32 | GFF3983 | | Cob(I)alamin adenosyltransferase (EC 2.5.1.17) | 0.31 | GFF3998 | | Cobyric acid synthase (EC 6.3.5.10) | low | > 90 |
Variovorax sp. OAS795 | 0.32 | ABID97_RS17395 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | 0.32 | ABID97_RS17340 | | cobyric acid synthase | low | > 91 |
Acidovorax sp. GW101-3H11 | 0.32 | Ac3H11_994 | | Cob(I)alamin adenosyltransferase (EC 2.5.1.17) | 0.30 | Ac3H11_999 | | Cobyric acid synthase (EC 6.3.5.10) | low | > 79 |
Mycobacterium tuberculosis H37Rv | 0.28 | Rv2849c | | Probable cob(I)alamin adenosyltransferase CobO (corrinoid adenosyltransferase) (corrinoid adotransferase activity) | 0.35 | Rv0255c | | Probable cobyric acid synthase CobQ1 | low | > 58 |
Fusobacterium nucleatum SB010 | 0.25 | HUW76_00780 | | cob(I)yrinic acid a,c-diamide adenosyltransferase | 0.39 | HUW76_05230 | | cobyric acid synthase | low | > 35 |
Desulfovibrio vulgaris Miyazaki F | 0.22 | DvMF_0199 | | ATP:corrinoid adenosyltransferase BtuR/CobO/CobP (RefSeq) | 0.38 | DvMF_2864 | | cobyric acid synthase (RefSeq) | — | — |
Desulfovibrio vulgaris Hildenborough JW710 | 0.21 | DVU1403 | cobO | cob(I)alamin adenosyltransferase (TIGR) | 0.38 | DVU0816 | cobQ | cobyric acid synthase CobQ (TIGR) | 0.94 | 1 |
Not shown: 24 genomes with orthologs for PP_1672 only; 7 genomes with orthologs for PP_1677 only