Conservation of cofitness between PP_1620 and PP_1621 in Pseudomonas putida KT2440

72 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1620 5'(3')-nucleotidase and polyphosphatase 1.0 PP_1621 Protein-L-isoaspartate O-methyltransferase 0.30 1
Pseudomonas fluorescens SBW25 0.86 PFLU_RS06415 5'/3'-nucleotidase SurE 0.86 PFLU_RS06420 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.59 7
Pseudomonas fluorescens SBW25-INTG 0.86 PFLU_RS06415 5'/3'-nucleotidase SurE 0.86 PFLU_RS06420 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.57 1
Pseudomonas fluorescens FW300-N1B4 0.86 Pf1N1B4_3112 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) 0.86 Pf1N1B4_3113 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) 0.46 2
Pseudomonas sp. S08-1 0.86 OH686_18170 5'/3'-nucleotidase SurE 0.78 OH686_18175 protein-L-isoaspartate O-methyltransferase low > 80
Pseudomonas simiae WCS417 0.86 PS417_06350 stationary phase survival protein SurE 0.86 PS417_06355 protein-L-isoaspartate O-methyltransferase 0.47 3
Pseudomonas fluorescens FW300-N2E3 0.85 AO353_16600 stationary phase survival protein SurE 0.86 AO353_16605 protein-L-isoaspartate O-methyltransferase 0.76 1
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_4678 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) 0.87 PfGW456L13_4677 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) 0.69 1
Pseudomonas syringae pv. syringae B728a ΔmexB 0.83 Psyr_1371 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase 0.87 Psyr_1372 Protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.83 Psyr_1371 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase 0.87 Psyr_1372 Protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.38 29
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_05900 stationary phase survival protein SurE 0.88 AO356_05895 protein-L-isoaspartate O-methyltransferase 0.63 1
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_3040 5-nucleotidase SurE (EC 3.1.3.5) 0.88 Pf6N2E2_3039 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) 0.80 1
Pseudomonas sp. RS175 0.81 PFR28_00424 '5'-nucleotidase SurE' transl_table=11 0.88 PFR28_00425 Protein-L-isoaspartate O-methyltransferase 0.80 1
Pseudomonas stutzeri RCH2 0.79 Psest_2810 5'/3'-nucleotidase SurE 0.80 Psest_2809 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.69 1
Shewanella loihica PV-4 0.51 Shew_1210 stationary-phase survival protein SurE (RefSeq) 0.49 Shew_1211 protein-L-isoaspartate O-methyltransferase (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_02820 5'-nucleotidase SurE 0.47 CSW01_02825 protein-L-isoaspartate O-methyltransferase low > 62
Dyella japonica UNC79MFTsu3.2 0.50 ABZR86_RS06595 5'/3'-nucleotidase SurE 0.44 ABZR86_RS06590 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 74
Rhodanobacter sp. FW510-T8 0.50 OKGIIK_08115 surE 5'/3'-nucleotidase SurE 0.44 OKGIIK_08110 pcm protein-L-isoaspartate(D-aspartate) O-methyltransferase — —
Shewanella amazonensis SB2B 0.50 Sama_1041 surE stationary phase survival protein SurE (RefSeq) 0.47 Sama_1042 protein-L-isoaspartate(D-aspartate) O-methyltransferase (RefSeq) low > 62
Marinobacter adhaerens HP15 0.50 HP15_1279 stationary-phase survival protein SurE 0.51 HP15_1280 protein-L-isoaspartate (D-aspartate) O-methyltransferase — —
Rhodanobacter denitrificans MT42 0.50 LRK55_RS16375 5'/3'-nucleotidase SurE 0.44 LRK55_RS16380 protein-L-isoaspartate(D-aspartate) O-methyltransferase — —
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS16650 5'/3'-nucleotidase SurE 0.44 LRK54_RS16655 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 59
Shewanella sp. ANA-3 0.50 Shewana3_1121 surE stationary phase survival protein SurE (RefSeq) 0.50 Shewana3_1122 protein-L-isoaspartate O-methyltransferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.50 SO3435 surE stationary-phase survival protein SurE (NCBI ptt file) 0.50 SO3434 pcm protein-L-isoaspartate O-methyltransferase (NCBI ptt file) low > 76
Kangiella aquimarina DSM 16071 0.49 B158DRAFT_2296 3'-nucleotidase (EC 3.1.3.6)/5'-nucleotidase (EC 3.1.3.5)/exopolyphosphatase (EC 3.6.1.11) 0.54 B158DRAFT_2297 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 40
Dechlorosoma suillum PS 0.48 Dsui_1968 5''/3''-nucleotidase SurE 0.47 Dsui_1969 protein-L-isoaspartate and D-aspartate O-methyltransferase 0.82 3
Rahnella sp. WP5 0.48 EX31_RS07840 5'/3'-nucleotidase SurE 0.46 EX31_RS07835 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 89
Serratia liquefaciens MT49 0.48 IAI46_03775 5'/3'-nucleotidase SurE 0.44 IAI46_03780 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 86
Lysobacter sp. OAE881 0.47 ABIE51_RS06485 5'/3'-nucleotidase SurE 0.44 ABIE51_RS06490 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 62
Klebsiella michiganensis M5al 0.47 BWI76_RS22660 5'/3'-nucleotidase SurE 0.44 BWI76_RS22655 protein-L-isoaspartate O-methyltransferase 0.25 25
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_00840 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase 0.38 H281DRAFT_00842 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.82 1
Enterobacter sp. TBS_079 0.46 MPMX20_03630 5'/3'-nucleotidase SurE 0.44 MPMX20_03629 Protein-L-isoaspartate O-methyltransferase low > 85
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.3131.1 hypothetical protein 0.46 Xcc-8004.3130.1 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) 0.65 1
Escherichia coli ECRC102 0.46 NIAGMN_18250 surE 5'/3'-nucleotidase SurE 0.42 NIAGMN_18255 pcm protein-L-isoaspartate O-methyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_00989 '5'/3'-nucleotidase SurE' transl_table=11 0.42 OHPLBJKB_00990 Protein-L-isoaspartate O-methyltransferase low > 73
Escherichia coli ECOR27 0.46 NOLOHH_12295 surE 5'/3'-nucleotidase SurE 0.42 NOLOHH_12300 pcm protein-L-isoaspartate O-methyltransferase low > 57
Escherichia coli BW25113 0.46 b2744 surE acid phosphatase (NCBI) 0.42 b2743 pcm protein-L-isoaspartate O-methyltransferase (NCBI) low > 76
Escherichia coli ECRC62 0.46 BNILDI_10845 surE 5'/3'-nucleotidase SurE 0.42 BNILDI_10850 pcm protein-L-isoaspartate O-methyltransferase — —
Escherichia coli ECRC101 0.46 OKFHMN_20480 surE 5'/3'-nucleotidase SurE 0.42 OKFHMN_20485 pcm protein-L-isoaspartate O-methyltransferase — —
Escherichia coli Nissle 1917 0.46 ECOLIN_RS15345 5'/3'-nucleotidase SurE 0.42 ECOLIN_RS15340 protein-L-isoaspartate O-methyltransferase low > 52
Escherichia coli ECRC101 0.46 MCAODC_11005 surE 5'/3'-nucleotidase SurE 0.42 MCAODC_11010 pcm protein-L-isoaspartate O-methyltransferase — —
Escherichia coli ECRC98 0.46 JDDGAC_24145 surE 5'/3'-nucleotidase SurE 0.42 JDDGAC_24150 pcm protein-L-isoaspartate O-methyltransferase — —
Escherichia fergusonii Becca 0.46 EFB2_01166 5'/3'-nucleotidase SurE 0.42 EFB2_01167 Protein-L-isoaspartate O-methyltransferase low > 86
Escherichia coli ECRC99 0.46 KEDOAH_07660 surE 5'/3'-nucleotidase SurE 0.42 KEDOAH_07655 pcm protein-L-isoaspartate O-methyltransferase — —
Escherichia coli BL21 0.46 ECD_02594 broad specificity 5'(3')-nucleotidase and polyphosphatase 0.42 ECD_02593 L-isoaspartate protein carboxylmethyltransferase type II 0.63 14
Escherichia coli ECOR38 0.46 HEPCGN_19660 surE 5'/3'-nucleotidase SurE 0.42 HEPCGN_19665 pcm protein-L-isoaspartate O-methyltransferase low > 85
Enterobacter asburiae PDN3 0.46 EX28DRAFT_2840 3'-nucleotidase (EC 3.1.3.6)/5'-nucleotidase (EC 3.1.3.5)/exopolyphosphatase (EC 3.6.1.11) 0.44 EX28DRAFT_2839 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 76
Erwinia tracheiphila SCR3 0.45 LU632_RS06465 surE 5'/3'-nucleotidase SurE 0.44 LU632_RS06470 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.45 GFF3879 5-nucleotidase SurE (EC 3.1.3.5) 0.35 GFF3880 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) 0.84 1
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF4792 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) 0.43 GFF4791 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) low > 78
Variovorax sp. SCN45 0.45 GFF2845 5'-nucleotidase SurE (EC 3.1.3.5) 0.38 GFF2844 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) 0.84 58
Variovorax sp. OAS795 0.45 ABID97_RS10715 5'/3'-nucleotidase SurE 0.38 ABID97_RS10720 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.46 29
Pantoea sp. MT58 0.45 IAI47_04220 5'/3'-nucleotidase SurE 0.43 IAI47_04225 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.68 1
Magnetospirillum magneticum AMB-1 0.33 AMB_RS12675 5'-nucleotidase SurE 0.39 AMB_RS12670 protein-L-isoaspartate O-methyltransferase — —
Azospirillum brasilense Sp245 0.32 AZOBR_RS15460 5'-nucleotidase 0.37 AZOBR_RS15455 protein-L-isoaspartate O-methyltransferase low > 97
Mucilaginibacter yixingensis YX-36 DSM 26809 0.32 ABZR88_RS03555 5'/3'-nucleotidase SurE 0.35 ABZR88_RS00725 protein-L-isoaspartate(D-aspartate) O-methyltransferase — —
Azospirillum sp. SherDot2 0.31 MPMX19_01169 5'-nucleotidase SurE 0.38 MPMX19_01168 Protein-L-isoaspartate O-methyltransferase low > 112
Caulobacter crescentus NA1000 Δfur 0.31 CCNA_02077 5'(3')-nucleotidase/polyphosphatase SurE 0.36 CCNA_02076 protein-L-isoaspartate O-methyltransferase — —
Caulobacter crescentus NA1000 0.31 CCNA_02077 5'(3')-nucleotidase/polyphosphatase SurE 0.36 CCNA_02076 protein-L-isoaspartate O-methyltransferase — —
Desulfovibrio vulgaris Hildenborough JW710 0.31 DVU2142 surE stationary-phase survival protein SurE (TIGR) 0.37 DVU1849 pcm protein-L-isoaspartate O-methyltransferase (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.31 DvMF_0021 stationary-phase survival protein SurE (RefSeq) 0.38 DvMF_0412 protein-L-isoaspartate O-methyltransferase (RefSeq) low > 51
Rhodospirillum rubrum S1H 0.30 Rru_A1769 Acid phosphatase (NCBI) 0.37 Rru_A1768 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (NCBI) — —
Brevundimonas sp. GW460-12-10-14-LB2 0.30 A4249_RS04645 5'/3'-nucleotidase SurE 0.33 A4249_RS04650 protein-L-isoaspartate(D-aspartate) O-methyltransferase — —
Rhizobium sp. OAE497 0.30 ABIE40_RS08480 5'/3'-nucleotidase SurE 0.25 ABIE40_RS08485 protein-L-isoaspartate(D-aspartate) O-methyltransferase 0.67 3
Rhodopseudomonas palustris CGA009 0.29 TX73_014710 5'/3'-nucleotidase SurE 0.36 TX73_014695 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 86
Bosea sp. OAE506 0.28 ABIE41_RS15015 5'/3'-nucleotidase SurE 0.20 ABIE41_RS15020 protein-L-isoaspartate O-methyltransferase low > 77
Pontibacter actiniarum KMM 6156, DSM 19842 0.27 CA264_12185 5'/3'-nucleotidase SurE 0.35 CA264_06105 protein-L-isoaspartate O-methyltransferase low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.26 CA265_RS16310 5'/3'-nucleotidase SurE 0.36 CA265_RS10925 protein-L-isoaspartate O-methyltransferase — —
Methanococcus maripaludis S2 0.26 MMP_RS05435 5'/3'-nucleotidase SurE 0.28 MMP_RS00570 protein-L-isoaspartate O-methyltransferase low > 25
Methanococcus maripaludis JJ 0.26 MMJJ_RS08930 5'/3'-nucleotidase SurE 0.28 MMJJ_RS04915 protein-L-isoaspartate O-methyltransferase low > 28
Phaeobacter inhibens DSM 17395 0.25 PGA1_c10770 5'-nucleotidase SurE 0.33 PGA1_c10760 protein-L-isoaspartate O-methyltransferase Pcm — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.25 Echvi_3388 5'/3'-nucleotidase SurE 0.35 Echvi_3721 protein-L-isoaspartate(D-aspartate) O-methyltransferase low > 79
Dinoroseobacter shibae DFL-12 0.21 Dshi_2136 stationary-phase survival protein SurE (RefSeq) 0.34 Dshi_2137 protein-L-isoaspartate O-methyltransferase (RefSeq) — —

Not shown: 23 genomes with orthologs for PP_1620 only; 5 genomes with orthologs for PP_1621 only