Conservation of cofitness between PP_1426 and PP_1079 in Pseudomonas putida KT2440

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1426 L-aspartate oxidase 1.0 PP_1079 Ornithine carbamoyltransferase 0.46 17
Pseudomonas fluorescens SBW25 0.90 PFLU_RS07225 L-aspartate oxidase 0.84 PFLU_RS05680 ornithine carbamoyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.90 PFLU_RS07225 L-aspartate oxidase 0.84 PFLU_RS05680 ornithine carbamoyltransferase — —
Pseudomonas fluorescens FW300-N2E3 0.90 AO353_17620 L-aspartate oxidase 0.86 AO353_04155 ornithine carbamoyltransferase low > 101
Pseudomonas simiae WCS417 0.90 PS417_07115 L-aspartate oxidase 0.86 PS417_05595 ornithine carbamoyltransferase 0.37 43
Pseudomonas fluorescens GW456-L13 0.89 PfGW456L13_4517 L-aspartate oxidase (EC 1.4.3.16) 0.86 PfGW456L13_1739 Ornithine carbamoyltransferase (EC 2.1.3.3) 0.40 68
Pseudomonas sp. RS175 0.89 PFR28_00689 L-aspartate oxidase 0.86 PFR28_03363 Ornithine carbamoyltransferase 1, anabolic 0.37 30
Pseudomonas fluorescens FW300-N1B4 0.89 Pf1N1B4_3322 L-aspartate oxidase (EC 1.4.3.16) 0.86 Pf1N1B4_762 Ornithine carbamoyltransferase (EC 2.1.3.3) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.89 Psyr_3959 L-aspartate oxidase 0.82 Psyr_3901 ornithine carbamoyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.89 Psyr_3959 L-aspartate oxidase 0.82 Psyr_3901 ornithine carbamoyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_04580 L-aspartate oxidase 0.86 AO356_18275 ornithine carbamoyltransferase low > 104
Pseudomonas sp. S08-1 0.87 OH686_20040 L-aspartate oxidase 0.79 OH686_20405 ornithine carbamoyltransferase low > 80
Pseudomonas stutzeri RCH2 0.86 Psest_3101 L-aspartate oxidase 0.82 Psest_1291 ornithine carbamoyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.85 Pf6N2E2_2758 L-aspartate oxidase (EC 1.4.3.16) 0.85 Pf6N2E2_5579 Ornithine carbamoyltransferase (EC 2.1.3.3) low > 103
Marinobacter adhaerens HP15 0.72 HP15_774 L-aspartate oxidase 0.66 HP15_750 ornithine carbamoyltransferase — —
Kangiella aquimarina DSM 16071 0.67 B158DRAFT_2179 L-aspartate oxidase (EC 1.4.3.16) 0.20 B158DRAFT_1975 Ornithine carbamoyltransferase low > 40
Shewanella oneidensis MR-1 0.66 SO1341 nadB L-aspartate oxidase (NCBI ptt file) 0.31 SO0277 argF ornithine carbamoyltransferase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.66 Shew_1047 L-aspartate oxidase (RefSeq) 0.31 Shew_0204 ornithine carbamoyltransferase (RefSeq) — —
Paraburkholderia bryophila 376MFSha3.1 0.65 H281DRAFT_04069 L-aspartate oxidase 0.52 H281DRAFT_04119 ornithine carbamoyltransferase low > 103
Paraburkholderia graminis OAS925 0.65 ABIE53_003292 L-aspartate oxidase 0.52 ABIE53_003354 ornithine carbamoyltransferase — —
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS03070 L-aspartate oxidase 0.51 QEN71_RS02785 ornithine carbamoyltransferase 0.58 91
Ralstonia solanacearum PSI07 0.64 RPSI07_RS12660 L-aspartate oxidase 0.50 RPSI07_RS12115 ornithine carbamoyltransferase — —
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS15640 L-aspartate oxidase 0.51 BPHYT_RS15915 ornithine carbamoyltransferase 0.35 51
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS17010 L-aspartate oxidase 0.50 RR42_RS17175 ornithine carbamoyltransferase — —
Dechlorosoma suillum PS 0.64 Dsui_2452 L-aspartate oxidase 0.52 Dsui_3249 ornithine carbamoyltransferase — —
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS04725 L-aspartate oxidase 0.50 RALBFv3_RS05185 ornithine carbamoyltransferase — —
Ralstonia solanacearum UW163 0.64 UW163_RS08945 L-aspartate oxidase 0.50 UW163_RS08440 ornithine carbamoyltransferase — —
Ralstonia solanacearum GMI1000 0.64 RS_RS12285 L-aspartate oxidase 0.50 RS_RS12805 ornithine carbamoyltransferase — —
Acinetobacter radioresistens SK82 0.64 MPMX26_02162 L-aspartate oxidase 0.62 MPMX26_01287 Ornithine carbamoyltransferase 1, anabolic low > 36
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS00345 L-aspartate oxidase 0.51 ABZR87_RS00840 ornithine carbamoyltransferase — —
Herbaspirillum seropedicae SmR1 0.63 HSERO_RS11085 L-aspartate oxidase 0.51 HSERO_RS07185 Ornithine carbamoyltransferase (EC 2.1.3.3) (from data) — —
Variovorax sp. SCN45 0.62 GFF2580 L-aspartate oxidase (EC 1.4.3.16) 0.53 GFF3926 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF1214 L-aspartate oxidase (EC 1.4.3.16) 0.50 GFF3419 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Magnetospirillum magneticum AMB-1 0.60 AMB_RS19650 L-aspartate oxidase 0.47 AMB_RS01610 ornithine carbamoyltransferase — —
Variovorax sp. OAS795 0.59 ABID97_RS07440 L-aspartate oxidase 0.55 ABID97_RS08630 ornithine carbamoyltransferase — —
Acidovorax sp. GW101-3H11 0.57 Ac3H11_3824 L-aspartate oxidase (EC 1.4.3.16) 0.51 Ac3H11_1333 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Castellaniella sp019104865 MT123 0.57 ABCV34_RS03690 L-aspartate oxidase 0.51 ABCV34_RS05380 ornithine carbamoyltransferase low > 48
Sphingomonas koreensis DSMZ 15582 0.56 Ga0059261_2248 L-aspartate oxidase (EC 1.4.3.16) 0.45 Ga0059261_3206 ornithine carbamoyltransferase — —
Pedobacter sp. GW460-11-11-14-LB5 0.45 CA265_RS21185 L-aspartate oxidase 0.13 CA265_RS18520 acetylornithine carbamoyltransferase low > 88
Parabacteroides merdae CL09T00C40 0.44 HMPREF1078_RS06605 L-aspartate oxidase 0.15 HMPREF1078_RS10660 acetylornithine carbamoyltransferase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.44 ABZR88_RS20645 L-aspartate oxidase 0.14 ABZR88_RS15495 acetylornithine carbamoyltransferase — —
Desulfovibrio vulgaris Miyazaki F 0.35 DvMF_0526 L-aspartate oxidase (RefSeq) 0.45 DvMF_0046 ornithine carbamoyltransferase (RefSeq) — —
Desulfovibrio vulgaris Hildenborough JW710 0.35 DVU1809 nadB L-aspartate oxidase (TIGR) 0.45 DVU1096 argF ornithine carbamoyltransferase (TIGR) — —
Synechococcus elongatus PCC 7942 0.34 Synpcc7942_1881 nadB L-aspartate oxidase 0.44 Synpcc7942_2514 argF ornithine carbamoyltransferase — —
Sinorhizobium meliloti 1021 0.29 SMc02599 L-aspartate oxidase 0.48 SMc02137 ornithine carbamoyltransferase low > 103
Bifidobacterium breve UCC2003 0.26 BBR_RS16725 L-aspartate oxidase 0.39 BBR_RS13905 ornithine carbamoyltransferase low > 34
Azospirillum sp. SherDot2 0.26 MPMX19_05671 L-aspartate oxidase 0.45 MPMX19_02178 Ornithine carbamoyltransferase, anabolic — —
Methanococcus maripaludis S2 0.26 MMP_RS06565 fumarate reductase subunit A 0.33 MMP_RS02925 ornithine carbamoyltransferase — —
Methanococcus maripaludis JJ 0.25 MMJJ_RS07785 fumarate reductase subunit A 0.33 MMJJ_RS02150 ornithine carbamoyltransferase — —
Rhodospirillum rubrum S1H 0.25 Rru_A1433 L-aspartate oxidase (NCBI) 0.50 Rru_A3276 Ornithine carbamoyltransferase (NCBI) 0.64 29
Agrobacterium fabrum C58 0.25 Atu4097 L-aspartate oxidase 0.47 Atu0429 ornithine carbamoyltransferase — —
Mycobacterium tuberculosis H37Rv 0.25 Rv1595 Probable L-aspartate oxidase NadB 0.38 Rv1656 Probable ornithine carbamoyltransferase, anabolic ArgF — —
Rhodopseudomonas palustris CGA009 0.25 TX73_005420 L-aspartate oxidase 0.46 TX73_024805 ornithine carbamoyltransferase — —
Caulobacter crescentus NA1000 0.21 CCNA_03007 L-aspartate oxidase 0.46 CCNA_02325 ornithine carbamoyltransferase — —
Caulobacter crescentus NA1000 Δfur 0.21 CCNA_03007 L-aspartate oxidase 0.46 CCNA_02325 ornithine carbamoyltransferase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.21 A4249_RS00630 L-aspartate oxidase 0.51 A4249_RS11920 ornithine carbamoyltransferase low > 48
Azospirillum brasilense Sp245 0.20 AZOBR_RS18685 L-aspartate oxidase 0.45 AZOBR_RS19030 ornithine carbamoyltransferase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.13 CA264_10795 succinate dehydrogenase flavoprotein subunit 0.16 CA264_06240 acetylornithine carbamoyltransferase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.12 Echvi_2795 succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup 0.17 Echvi_3849 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) — —

Not shown: 33 genomes with orthologs for PP_1426 only; 8 genomes with orthologs for PP_1079 only