Conservation of cofitness between PP_0422 and PP_0417 in Pseudomonas putida KT2440

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0422 Indole-3-glycerol phosphate synthase 1.0 PP_0417 Anthranilate synthase component 1 0.94 1
Pseudomonas fluorescens FW300-N2E2 0.88 Pf6N2E2_4826 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.91 Pf6N2E2_4822 Anthranilate synthase, aminase component (EC 4.1.3.27) low > 103
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_2549 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.90 Pf1N1B4_2545 Anthranilate synthase, aminase component (EC 4.1.3.27) 0.96 2
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_1222 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.88 PfGW456L13_1217 Anthranilate synthase, aminase component (EC 4.1.3.27) 0.98 2
Pseudomonas fluorescens FW300-N2C3 0.87 AO356_14440 indole-3-glycerol-phosphate synthase 0.90 AO356_14420 anthranilate synthase 0.95 2
Pseudomonas sp. RS175 0.87 PFR28_04043 Indole-3-glycerol phosphate synthase 0.90 PFR28_04047 Anthranilate synthase component 1
Pseudomonas simiae WCS417 0.86 PS417_25710 indole-3-glycerol-phosphate synthase 0.89 PS417_25725 anthranilate synthase component I 0.88 1
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_07210 indole-3-glycerol-phosphate synthase 0.90 AO353_07230 anthranilate synthase 0.96 1
Pseudomonas fluorescens SBW25 0.84 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.89 PFLU_RS27380 anthranilate synthase component I 0.47 53
Pseudomonas fluorescens SBW25-INTG 0.84 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.89 PFLU_RS27380 anthranilate synthase component I 0.47 31
Pseudomonas syringae pv. syringae B728a ΔmexB 0.82 Psyr_4579 indole-3-glycerol phosphate synthase 0.87 Psyr_4609 anthranilate synthase, component I 0.43 54
Pseudomonas syringae pv. syringae B728a 0.82 Psyr_4579 indole-3-glycerol phosphate synthase 0.87 Psyr_4609 anthranilate synthase, component I 0.34 37
Pseudomonas sp. S08-1 0.81 OH686_15140 Indole-3-glycerol phosphate synthase 0.85 OH686_15125 anthranilate synthase component I 0.95 1
Pseudomonas stutzeri RCH2 0.77 Psest_3647 Indole-3-glycerol phosphate synthase 0.84 Psest_3650 anthranilate synthase component I, non-proteobacterial lineages 0.94 3
Marinobacter adhaerens HP15 0.62 HP15_3291 indole-3-glycerol phosphate synthase 0.65 HP15_3288 anthranilate synthase component I 0.90 1
Xanthomonas campestris pv. campestris strain 8004 0.58 Xcc-8004.622.1 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.56 Xcc-8004.608.1 Anthranilate synthase, aminase component (EC 4.1.3.27) 0.94 5
Lysobacter sp. OAE881 0.53 ABIE51_RS04190 indole-3-glycerol phosphate synthase TrpC 0.53 ABIE51_RS04150 anthranilate synthase component I 0.88 5
Paraburkholderia sabiae LMG 24235 0.53 QEN71_RS27565 indole-3-glycerol phosphate synthase TrpC 0.54 QEN71_RS27550 anthranilate synthase component I 0.98 1
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_12280 trpC indole-3-glycerol phosphate synthase TrpC 0.54 OKGIIK_12405 trpE anthranilate synthase component I 0.61 7
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS18310 indole-3-glycerol-phosphate synthase 0.53 RR42_RS18295 anthranilate synthase component I 0.33 9
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS17405 indole-3-glycerol phosphate synthase 0.53 BPHYT_RS17390 anthranilate synthase subunit I 0.87 2
Castellaniella sp019104865 MT123 0.51 ABCV34_RS10310 indole-3-glycerol phosphate synthase TrpC 0.51 ABCV34_RS10280 anthranilate synthase component I
Dechlorosoma suillum PS 0.51 Dsui_0168 Indole-3-glycerol phosphate synthase 0.59 Dsui_0219 anthranilate synthase component I
Paraburkholderia graminis OAS925 0.50 ABIE53_003643 indole-3-glycerol phosphate synthase 0.53 ABIE53_003640 anthranilate synthase component 1
Variovorax sp. OAS795 0.50 ABID97_RS05280 indole-3-glycerol phosphate synthase TrpC 0.52 ABID97_RS05250 anthranilate synthase component I 0.64 5
Hydrogenophaga sp. GW460-11-11-14-LB1 0.50 GFF3111 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.53 GFF3106 Anthranilate synthase, aminase component (EC 4.1.3.27) 0.94 4
Dyella japonica UNC79MFTsu3.2 0.50 ABZR86_RS12065 indole-3-glycerol phosphate synthase TrpC 0.54 ABZR86_RS12180 anthranilate synthase component I 0.91 37
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_05712 indole-3-glycerol phosphate synthase 0.53 H281DRAFT_05715 anthranilate synthase, component I 0.76 7
Ralstonia solanacearum UW163 0.49 UW163_RS07120 indole-3-glycerol phosphate synthase TrpC 0.53 UW163_RS07140 anthranilate synthase component I
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS06505 indole-3-glycerol phosphate synthase TrpC 0.53 RALBFv3_RS06485 anthranilate synthase component I
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS02160 indole-3-glycerol phosphate synthase TrpC 0.53 ABZR87_RS02140 anthranilate synthase component I 0.87 9
Ralstonia solanacearum GMI1000 0.49 RS_RS14450 Indole-3-glycerol phosphate synthase 1 0.53 RS_RS14430 anthranilate synthase component I
Ralstonia solanacearum PSI07 0.49 RPSI07_RS10735 indole-3-glycerol phosphate synthase TrpC 0.53 RPSI07_RS10755 anthranilate synthase component I
Acidovorax sp. GW101-3H11 0.49 Ac3H11_772 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.54 Ac3H11_767 Anthranilate synthase, aminase component (EC 4.1.3.27) 0.98 3
Acinetobacter radioresistens SK82 0.49 MPMX26_00983 Indole-3-glycerol phosphate synthase 0.50 MPMX26_00199 Anthranilate synthase component 1 0.97 6
Variovorax sp. SCN45 0.48 GFF5890 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.52 GFF5896 Anthranilate synthase, aminase component (EC 4.1.3.27)
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS11570 indole-3-glycerol phosphate synthase TrpC 0.56 LRK54_RS11415 anthranilate synthase component I 0.71 4
Rhodanobacter denitrificans MT42 0.47 LRK55_RS11300 indole-3-glycerol phosphate synthase TrpC 0.56 LRK55_RS11145 anthranilate synthase component I low > 63
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS19450 indole-3-glycerol-phosphate synthase 0.54 HSERO_RS19435 anthranilate synthase subunit I 0.92 3
Phaeobacter inhibens DSM 17395 0.45 PGA1_c16910 indole-3-glycerol phosphate synthase TrpC 0.39 PGA1_c16860 anthranilate synthase component 1
Rhodospirillum rubrum S1H 0.45 Rru_A1897 Indole-3-glycerol-phosphate synthase (NCBI) 0.41 Rru_A1891 Anthranilate synthase component I (NCBI) 0.67 46
Azospirillum sp. SherDot2 0.44 MPMX19_01014 Indole-3-glycerol phosphate synthase 0.41 MPMX19_00893 Anthranilate synthase component 1 low > 112
Sphingomonas koreensis DSMZ 15582 0.44 Ga0059261_0930 indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.36 Ga0059261_0256 anthranilate synthase component I, non-proteobacterial lineages 0.99 1
Magnetospirillum magneticum AMB-1 0.44 AMB_RS14415 indole-3-glycerol phosphate synthase TrpC 0.41 AMB_RS09175 anthranilate synthase component I
Dinoroseobacter shibae DFL-12 0.44 Dshi_1800 Indole-3-glycerol-phosphate synthase (RefSeq) 0.41 Dshi_1796 anthranilate synthase component I (RefSeq)
Azospirillum brasilense Sp245 0.42 AZOBR_RS07450 indole-3-glycerol-phosphate synthase 0.41 AZOBR_RS07490 anthranilate synthase subunit I low > 97
Brevundimonas sp. GW460-12-10-14-LB2 0.42 A4249_RS06175 indole-3-glycerol phosphate synthase TrpC 0.37 A4249_RS06155 anthranilate synthase component I
Caulobacter crescentus NA1000 Δfur 0.42 CCNA_01976 Indole-3-glycerol phosphate synthase 0.37 CCNA_01972 anthranilate synthase component I low > 67
Caulobacter crescentus NA1000 0.42 CCNA_01976 Indole-3-glycerol phosphate synthase 0.37 CCNA_01972 anthranilate synthase component I 0.97 3
Bosea sp. OAE506 0.41 ABIE41_RS17425 indole-3-glycerol phosphate synthase TrpC 0.39 ABIE41_RS15730 anthranilate synthase component I
Pedobacter sp. GW460-11-11-14-LB5 0.36 CA265_RS22900 indole-3-glycerol phosphate synthase 0.27 CA265_RS22890 anthranilate synthase component I 0.58 2
Echinicola vietnamensis KMM 6221, DSM 17526 0.34 Echvi_2508 Indole-3-glycerol phosphate synthase 0.25 Echvi_2504 Anthranilate/para-aminobenzoate synthases component I
Synechococcus elongatus PCC 7942 0.33 Synpcc7942_1197 trpC indole-3-glycerol-phosphate synthase 0.39 Synpcc7942_1003 trpE anthranilate synthase, component I
Mucilaginibacter yixingensis YX-36 DSM 26809 0.33 ABZR88_RS16605 indole-3-glycerol phosphate synthase TrpC 0.27 ABZR88_RS16595 anthranilate synthase component I family protein
Bacteroides ovatus ATCC 8483 0.33 BACOVA_03783 indole-3-glycerol phosphate synthase 0.26 BACOVA_03780 chorismate binding enzyme 0.96 3
Bacteroides thetaiotaomicron VPI-5482 0.32 BT0529 indole-3-glycerol phosphate synthase (NCBI ptt file) 0.25 BT0532 anthranilate synthase component I (NCBI ptt file) 0.74 41
Parabacteroides merdae CL09T00C40 0.28 HMPREF1078_RS00130 indole-3-glycerol phosphate synthase TrpC 0.25 HMPREF1078_RS00145 anthranilate synthase component I family protein 0.96 15
Mycobacterium tuberculosis H37Rv 0.28 Rv1611 Probable indole-3-glycerol phosphate synthase TrpC 0.37 Rv1609 Anthranilate synthase component I TrpE (glutamine amidotransferase)
Bacteroides stercoris CC31F 0.27 HMPREF1181_RS15340 indole-3-glycerol phosphate synthase TrpC 0.26 HMPREF1181_RS15325 anthranilate synthase component I family protein 0.96 3
Phocaeicola dorei CL03T12C01 0.24 ABI39_RS21065 indole-3-glycerol phosphate synthase TrpC 0.26 ABI39_RS21050 anthranilate synthase component I family protein 0.74 35
Pontibacter actiniarum KMM 6156, DSM 19842 0.23 CA264_05070 indole-3-glycerol phosphate synthase 0.25 CA264_05055 anthranilate synthase component I low > 74
Desulfovibrio vulgaris Hildenborough JW710 0.20 DVU0468 trpC indole-3-glycerol phosphate synthase (TIGR) 0.28 DVU0465 trpE anthranilate synthase, component I (TIGR) 0.98 2

Not shown: 4 genomes with orthologs for PP_0422 only; 19 genomes with orthologs for PP_0417 only