Conservation of cofitness between MCAODC_06840 and MCAODC_00915 in Escherichia coli ECRC101

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC101 1.0 MCAODC_06840 chuU heme permease protein ChuU 1.0 MCAODC_00915 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.50 13
Escherichia coli ECRC98 1.00 JDDGAC_19955 chuU heme permease protein ChuU 1.00 JDDGAC_13995 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 86
Escherichia coli ECRC102 1.00 NIAGMN_14090 chuU heme permease protein ChuU 1.00 NIAGMN_08250 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase
Escherichia coli Nissle 1917 1.00 ECOLIN_RS20060 heme ABC transporter permease ShuU/ChuU 0.98 ECOLIN_RS00745 3-methyl-2-oxobutanoate hydroxymethyltransferase
Escherichia coli ECRC100 1.00 OKFHMN_16325 chuU heme permease protein ChuU 1.00 OKFHMN_10400 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 80
Escherichia coli ECRC99 1.00 KEDOAH_11820 chuU heme permease protein ChuU 1.00 KEDOAH_17755 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase
Escherichia coli ECOR38 0.99 HEPCGN_15225 shuU heme ABC transporter permease ShuU/ChuU 0.98 HEPCGN_08375 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 87
Escherichia fergusonii Becca 0.99 EFB2_00303 Hemin transport system permease protein HmuU 0.98 EFB2_03910 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 86
Erwinia tracheiphila SCR3 0.61 LU632_RS20345 iron ABC transporter permease 0.80 LU632_RS20100 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 74
Rahnella sp. WP5 0.60 EX31_RS13960 iron ABC transporter permease 0.80 EX31_RS03280 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 89
Serratia liquefaciens MT49 0.58 IAI46_11075 iron ABC transporter permease 0.79 IAI46_21240 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 86
Pectobacterium carotovorum WPP14 0.55 HER17_RS08860 iron ABC transporter permease 0.79 HER17_RS05560 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 75
Enterobacter sp. TBS_079 0.54 MPMX20_01915 Hemin transport system permease protein HmuU 0.92 MPMX20_00827 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 85
Pantoea sp. MT58 0.51 IAI47_03525 iron ABC transporter permease 0.77 IAI47_15655 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 76
Klebsiella michiganensis M5al 0.49 BWI76_RS22470 transporter permease 0.91 BWI76_RS04995 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 92
Dickeya dadantii 3937 0.39 DDA3937_RS06870 iron ABC transporter permease 0.77 DDA3937_RS15955 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 74
Sinorhizobium meliloti 1021 0.38 SMc01511 hemin transport system permease transmembrane protein 0.34 SMc01881 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 103
Echinicola vietnamensis KMM 6221, DSM 17526 0.37 Echvi_3111 ABC-type Fe3+-siderophore transport system, permease component 0.39 Echvi_1836 3-methyl-2-oxobutanoate hydroxymethyltransferase
Pseudomonas fluorescens SBW25 0.35 PFLU_RS25690 iron ABC transporter permease 0.56 PFLU_RS25750 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 109
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_5165 Hemin ABC transporter, permease protein 0.58 Pf6N2E2_5153 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 103
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS25690 iron ABC transporter permease 0.56 PFLU_RS25750 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 109
Pseudomonas simiae WCS417 0.35 PS417_23850 ABC transporter permease 0.57 PS417_23910 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 88
Vibrio cholerae E7946 ATCC 55056 0.35 CSW01_18715 iron ABC transporter permease 0.72 CSW01_03135 3-methyl-2-oxobutanoate hydroxymethyltransferase
Pseudomonas stutzeri RCH2 0.34 Psest_1024 ABC-type Fe3+-siderophore transport system, permease component 0.55 Psest_0996 3-methyl-2-oxobutanoate hydroxymethyltransferase
Pseudomonas fluorescens FW300-N1B4 0.33 Pf1N1B4_2867 Hemin ABC transporter, permease protein 0.57 Pf1N1B4_2854 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 87
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_14445 ABC transporter permease 0.59 AO353_14385 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 101
Acidovorax sp. GW101-3H11 0.33 Ac3H11_227 Hemin ABC transporter, permease protein 0.41 Ac3H11_3839 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 79
Dinoroseobacter shibae DFL-12 0.33 Dshi_0572 transport system permease protein (RefSeq) 0.31 Dshi_2966 3-methyl-2-oxobutanoate hydroxymethyltransferase (RefSeq)
Marinobacter adhaerens HP15 0.32 HP15_2998 hemin ABC transporter, permease protein 0.57 HP15_324 3-methyl-2-oxobutanoate hydroxymethyltransferase
Pseudomonas sp. RS175 0.32 PFR28_03709 Hemin transport system permease protein HmuU 0.59 PFR28_03721 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 88
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_16120 ABC transporter permease 0.59 AO356_16060 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 104
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF2478 Hemin ABC transporter, permease protein 0.42 GFF1218 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)
Dyella japonica UNC79MFTsu3.2 0.32 ABZR86_RS04590 iron ABC transporter permease 0.48 ABZR86_RS00815 3-methyl-2-oxobutanoate hydroxymethyltransferase
Variovorax sp. SCN45 0.31 GFF2821 Hemin ABC transporter, permease protein 0.40 GFF2579 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 127
Shewanella oneidensis MR-1 0.31 SO3674 hmuU hemin ABC transporter, permease protein (NCBI ptt file) 0.68 SO0870 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.30 Shewana3_3240 transport system permease protein (RefSeq) 0.66 Shewana3_3408 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase (RefSeq) low > 73
Pseudomonas fluorescens GW456-L13 0.29 PfGW456L13_80 ABC transporter (iron.B12.siderophore.hemin) , permease component 0.58 PfGW456L13_1521 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 87
Pseudomonas putida KT2440 0.29 PP_4688 Heme/hemin ABC transporter, permease protein 0.58 PP_4699 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 96
Alteromonas macleodii MIT1002 0.28 MIT1002_01385 Hemin transport system permease protein HmuU 0.65 MIT1002_03694 3-methyl-2-oxobutanoate hydroxymethyltransferase
Pseudomonas sp. S08-1 0.27 OH686_17300 Heme ABC transporter, permease protein HmuU 0.58 OH686_17245 3-methyl-2-oxobutanoate hydroxymethyltransferase
Pontibacter actiniarum KMM 6156, DSM 19842 0.27 CA264_01390 iron ABC transporter permease 0.39 CA264_20605 3-methyl-2-oxobutanoate hydroxymethyltransferase
Escherichia coli BL21 0.26 ECD_04154 ferric citrate ABC transporter permease 0.98 ECD_00133 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 61
Escherichia coli BW25113 0.26 b4288 fecD KpLE2 phage-like element; iron-dicitrate transporter subunit (NCBI) 0.96 b0134 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase (NCBI) low > 76
Bacteroides ovatus ATCC 8483 0.26 BACOVA_03269 iron chelate uptake ABC transporter, FeCT family, permease protein 0.32 BACOVA_02402 3-methyl-2-oxobutanoate hydroxymethyltransferase
Bacteroides thetaiotaomicron VPI-5482 0.25 BT2099 Fe3+ ABC transporter, permease (NCBI ptt file) 0.33 BT0698 3-methyl-2-oxobutanoate hydroxymethyltransferase (NCBI ptt file)
Pseudomonas syringae pv. syringae B728a 0.25 Psyr_3095 transport system permease protein 0.55 Psyr_0828 ketopantoate hydroxymethyltransferase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.25 Psyr_3095 transport system permease protein 0.55 Psyr_0828 ketopantoate hydroxymethyltransferase low > 86
Cupriavidus basilensis FW507-4G11 0.24 RR42_RS16135 ABC transporter permease 0.44 RR42_RS17250 3-methyl-2-oxobutanoate hydroxymethyltransferase
Castellaniella sp019104865 MT123 0.24 ABCV34_RS11140 iron ABC transporter permease 0.36 ABCV34_RS13815 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 48
Desulfovibrio vulgaris Hildenborough JW710 0.24 DVU0649 iron compound ABC transporter, permease protein (TIGR) 0.41 DVU2446 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase (TIGR) low > 55
Dechlorosoma suillum PS 0.24 Dsui_0530 ABC-type Fe3+-siderophore transport system, permease component 0.45 Dsui_1471 3-methyl-2-oxobutanoate hydroxymethyltransferase
Bacteroides stercoris CC31F 0.23 HMPREF1181_RS10605 iron ABC transporter permease 0.36 HMPREF1181_RS16225 3-methyl-2-oxobutanoate hydroxymethyltransferase
Azospirillum sp. SherDot2 0.23 MPMX19_05168 Hemin transport system permease protein HmuU 0.37 MPMX19_01580 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 112
Phocaeicola vulgatus CL09T03C04 0.22 HMPREF1058_RS01565 iron ABC transporter permease 0.38 HMPREF1058_RS17810 3-methyl-2-oxobutanoate hydroxymethyltransferase
Parabacteroides merdae CL09T00C40 0.22 HMPREF1078_RS07465 iron ABC transporter permease 0.32 HMPREF1078_RS09715 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 61
Phocaeicola dorei CL03T12C01 0.22 ABI39_RS15500 iron ABC transporter permease 0.39 ABI39_RS14025 3-methyl-2-oxobutanoate hydroxymethyltransferase
Paraburkholderia sabiae LMG 24235 0.22 QEN71_RS25140 iron ABC transporter permease 0.51 QEN71_RS26480 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 153
Sphingomonas koreensis DSMZ 15582 0.22 Ga0059261_0623 ABC-type Fe3+-siderophore transport system, permease component 0.36 Ga0059261_0311 3-methyl-2-oxobutanoate hydroxymethyltransferase
Caulobacter crescentus NA1000 0.22 CCNA_01250 FecCD-family transporter protein 0.31 CCNA_01723 3-methyl-2-oxobutanoate hydroxymethyltransferase
Caulobacter crescentus NA1000 Δfur 0.22 CCNA_01250 FecCD-family transporter protein 0.31 CCNA_01723 3-methyl-2-oxobutanoate hydroxymethyltransferase
Rhodospirillum rubrum S1H 0.22 Rru_A1137 transport system permease protein (NCBI) 0.31 Rru_A3321 3-methyl-2-oxobutanoate hydroxymethyltransferase (NCBI)
Shewanella loihica PV-4 0.22 Shew_0713 transport system permease protein (RefSeq) 0.68 Shew_3133 3-methyl-2-oxobutanoate hydroxymethyltransferase (RefSeq)
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_00137 iron complex transport system permease protein 0.54 H281DRAFT_04703 ketopantoate hydroxymethyltransferase
Desulfovibrio vulgaris Miyazaki F 0.21 DvMF_1497 transport system permease protein (RefSeq) 0.41 DvMF_2949 3-methyl-2-oxobutanoate hydroxymethyltransferase (RefSeq) low > 51
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS04855 iron ABC transporter 0.50 BPHYT_RS03605 3-methyl-2-oxobutanoate hydroxymethyltransferase
Shewanella amazonensis SB2B 0.21 Sama_0761 iron-compound ABC transporter, permease protein (RefSeq) 0.68 Sama_0776 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase (RefSeq)
Paraburkholderia graminis OAS925 0.20 ABIE53_001247 iron complex transport system permease protein 0.53 ABIE53_000867 3-methyl-2-oxobutanoate hydroxymethyltransferase
Variovorax sp. OAS795 0.20 ABID97_RS17405 iron ABC transporter permease 0.40 ABID97_RS07435 3-methyl-2-oxobutanoate hydroxymethyltransferase
Brevundimonas sp. GW460-12-10-14-LB2 0.19 A4249_RS05460 iron ABC transporter permease 0.30 A4249_RS03695 3-methyl-2-oxobutanoate hydroxymethyltransferase
Acinetobacter radioresistens SK82 0.16 MPMX26_01195 Petrobactin import system permease protein YclN 0.52 MPMX26_00545 3-methyl-2-oxobutanoate hydroxymethyltransferase

Not shown: 4 genomes with orthologs for MCAODC_06840 only; 29 genomes with orthologs for MCAODC_00915 only