Conservation of cofitness between HSERO_RS23460 and HSERO_RS23440 in Herbaspirillum seropedicae SmR1

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS23460 3-methylcrotonyl-CoA carboxylase subunit alpha 1.0 HSERO_RS23440 isovaleryl-CoA dehydrogenase 0.60 17
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS26895 3-methylcrotonyl-CoA carboxylase 0.80 RR42_RS00870 isovaleryl-CoA dehydrogenase
Ralstonia solanacearum GMI1000 0.62 RS_RS01300 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.79 RS_RS01370 isovaleryl-CoA dehydrogenase low > 80
Ralstonia solanacearum PSI07 0.62 RPSI07_RS22860 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.79 RPSI07_RS22785 isovaleryl-CoA dehydrogenase low > 81
Ralstonia solanacearum IBSBF1503 0.62 RALBFv3_RS10460 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.79 RALBFv3_RS10530 isovaleryl-CoA dehydrogenase 0.47 5
Ralstonia solanacearum UW163 0.62 UW163_RS03120 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.79 UW163_RS03050 isovaleryl-CoA dehydrogenase
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS06260 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.80 ABZR87_RS06320 isovaleryl-CoA dehydrogenase low > 80
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS12855 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.80 QEN71_RS12870 isovaleryl-CoA dehydrogenase 0.90 3
Dechlorosoma suillum PS 0.57 Dsui_0982 acetyl/propionyl-CoA carboxylase, alpha subunit 0.80 Dsui_0975 acyl-CoA dehydrogenase low > 51
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS23275 3-methylcrotonyl-CoA carboxylase subunit alpha 0.80 BPHYT_RS23260 isovaleryl-CoA dehydrogenase 0.22 67
Paraburkholderia graminis OAS925 0.56 ABIE53_005468 3-methylcrotonyl-CoA carboxylase alpha subunit 0.80 ABIE53_005465 isovaleryl-CoA dehydrogenase 0.17 91
Acidovorax sp. GW101-3H11 0.55 Ac3H11_3016 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) 0.77 Ac3H11_2991 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data)
Paraburkholderia bryophila 376MFSha3.1 0.55 H281DRAFT_01343 3-methylcrotonoyl-CoA carboxylase, alpha subunit 0.81 H281DRAFT_01346 isovaleryl-CoA dehydrogenase 0.64 4
Variovorax sp. SCN45 0.55 GFF2013 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) 0.77 GFF2006 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) 0.83 14
Kangiella aquimarina DSM 16071 0.54 B158DRAFT_2507 Acetyl/propionyl-CoA carboxylase, alpha subunit 0.71 B158DRAFT_2512 Acyl-CoA dehydrogenases
Xanthomonas campestris pv. campestris strain 8004 0.54 Xcc-8004.318.1 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) 0.72 Xcc-8004.321.1 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) 0.69 8
Variovorax sp. OAS795 0.54 ABID97_RS25115 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.76 ABID97_RS25140 isovaleryl-CoA dehydrogenase 0.96 1
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF1711 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) 0.77 GFF1725 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) 0.83 16
Acinetobacter radioresistens SK82 0.52 MPMX26_00629 Acetyl-/propionyl-coenzyme A carboxylase alpha chain 0.76 MPMX26_00632 Acyl-CoA dehydrogenase, short-chain specific
Castellaniella sp019104865 MT123 0.51 ABCV34_RS12350 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.75 ABCV34_RS12370 isovaleryl-CoA dehydrogenase 0.99 1
Azospirillum sp. SherDot2 0.51 MPMX19_03940 Acetyl-/propionyl-coenzyme A carboxylase alpha chain 0.80 MPMX19_03935 Acyl-CoA dehydrogenase, short-chain specific low > 112
Marinobacter adhaerens HP15 0.50 HP15_4179 methylcrotonyl-CoA carboxylase, alpha subunit 0.73 HP15_1005 acyl-CoA dehydrogenase domain protein low > 73
Azospirillum brasilense Sp245 0.50 AZOBR_RS22285 3-methylcrotonyl-CoA carboxylase subunit alpha 0.79 AZOBR_RS22310 isovaleryl-CoA dehydrogenase
Magnetospirillum magneticum AMB-1 0.49 AMB_RS03465 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.80 AMB_RS03480 isovaleryl-CoA dehydrogenase low > 64
Agrobacterium fabrum C58 0.48 Atu3479 3-methylcrotonyl-CoA carboxylase subunit alpha 0.69 Atu3477 acyl-CoA dehydrogenase 0.42 8
Alteromonas macleodii MIT1002 0.47 MIT1002_01666 Acetyl-/propionyl-coenzyme A carboxylase alpha chain 0.72 MIT1002_01669 Acyl-CoA dehydrogenase 0.78 13
Pseudomonas putida KT2440 0.47 PP_4067 methylcrotonyl-CoA carboxylase biotin-containing subunit alpha 0.72 PP_4064 isovaleryl-CoA dehydrogenase 0.89 2
Pseudomonas sp. RS175 0.46 PFR28_01257 Acetyl-/propionyl-coenzyme A carboxylase alpha chain 0.74 PFR28_01260 Acyl-CoA dehydrogenase 0.89 2
Pseudomonas stutzeri RCH2 0.46 Psest_1080 Acetyl/propionyl-CoA carboxylase, alpha subunit 0.72 Psest_1084 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) 0.77 2
Pseudomonas sp. S08-1 0.46 OH686_00840 Methylcrotonyl-CoA carboxylase biotin-containing subunit 0.74 OH686_00855 Isovaleryl-CoA dehydrogenase 0.83 5
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_2467 3-methylcrotonoyl-CoA carboxylase, alpha subunit 0.73 Psyr_2470 isovaleryl-CoA dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_2467 3-methylcrotonoyl-CoA carboxylase, alpha subunit 0.73 Psyr_2470 isovaleryl-CoA dehydrogenase low > 86
Shewanella sp. ANA-3 0.46 Shewana3_1669 3-methylcrotonoyl-CoA carboxylase, alpha subunit (RefSeq) 0.72 Shewana3_1672 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) 0.81 2
Shewanella loihica PV-4 0.45 Shew_2573 carbamoyl-phosphate synthase L chain, ATP-binding (RefSeq) 0.73 Shew_2570 acyl-CoA dehydrogenase domain-containing protein (RefSeq) 0.82 2
Pseudomonas fluorescens SBW25 0.45 PFLU_RS18980 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.72 PFLU_RS18965 isovaleryl-CoA dehydrogenase 0.66 65
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS18980 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.72 PFLU_RS18965 isovaleryl-CoA dehydrogenase 0.83 2
Shewanella oneidensis MR-1 0.45 SO1894 acetyl-CoA carboxylase, biotin carboxylase, putative (NCBI ptt file) 0.72 SO1897 ivd isovaleryl-CoA dehydrogenase (NCBI ptt file) low > 76
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_3984 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) 0.73 Pf1N1B4_3987 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) 0.46 1
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_2194 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) 0.73 Pf6N2E2_2191 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) 0.82 2
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_01595 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) 0.73 AO356_01580 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) 0.74 2
Pseudomonas simiae WCS417 0.45 PS417_17030 3-methylcrotonyl-CoA carboxylase 0.73 PS417_17015 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data)
Sinorhizobium meliloti 1021 0.45 SM_b21124 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) 0.73 SM_b21121 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) 0.83 2
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_2588 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) 0.73 PfGW456L13_2591 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) 0.71 2
Pseudomonas fluorescens FW300-N2E3 0.45 AO353_20335 3-methylcrotonyl-CoA carboxylase 0.73 AO353_20350 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) 0.42 7
Rhodopseudomonas palustris CGA009 0.45 TX73_013120 acetyl-CoA carboxylase biotin carboxylase subunit 0.75 TX73_008290 isovaleryl-CoA dehydrogenase 0.81 2
Shewanella amazonensis SB2B 0.45 Sama_1359 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) 0.73 Sama_1362 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) 0.40 6
Rhizobium sp. OAE497 0.45 ABIE40_RS20775 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.73 ABIE40_RS20795 isovaleryl-CoA dehydrogenase 0.93 3
Bosea sp. OAE506 0.43 ABIE41_RS14850 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.73 ABIE41_RS14775 isovaleryl-CoA dehydrogenase low > 77
Lysobacter sp. OAE881 0.43 ABIE51_RS13200 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha 0.60 ABIE51_RS13125 isovaleryl-CoA dehydrogenase 0.52 35
Caulobacter crescentus NA1000 0.43 CCNA_02250 methylcrotonyl-CoA carboxylase biotin-containing subunit 0.63 CCNA_02254 isovaleryl-CoA dehydrogenase 0.77 2
Caulobacter crescentus NA1000 Δfur 0.43 CCNA_02250 methylcrotonyl-CoA carboxylase biotin-containing subunit 0.63 CCNA_02254 isovaleryl-CoA dehydrogenase low > 67
Phaeobacter inhibens DSM 17395 0.43 PGA1_c10330 methylcrotonoyl-CoA carboxylase subunit alpha 0.64 PGA1_c10280 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data)
Rhodanobacter sp. FW510-T8 0.42 OKGIIK_09335 3-methylcrotonyl-CoA carboxylase 0.62 OKGIIK_04045 caiA acyl-CoA dehydrogenase low > 52
Rhodanobacter denitrificans MT42 0.42 LRK55_RS02035 biotin carboxylase N-terminal domain-containing protein 0.62 LRK55_RS14990 isovaleryl-CoA dehydrogenase low > 63
Sphingomonas koreensis DSMZ 15582 0.42 Ga0059261_4056 Acetyl/propionyl-CoA carboxylase, alpha subunit 0.61 Ga0059261_4052 Acyl-CoA dehydrogenases 0.51 6
Rhodanobacter denitrificans FW104-10B01 0.41 LRK54_RS02280 ATP-grasp domain-containing protein 0.62 LRK54_RS15275 isovaleryl-CoA dehydrogenase low > 59
Rhodospirillum rubrum S1H 0.41 Rru_A1941 acyl-CoA carboxylase alpha chain (NCBI) 0.74 Rru_A1948 Acyl-CoA dehydrogenase (NCBI) low > 58
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS20625 biotin carboxylase N-terminal domain-containing protein 0.62 ABZR86_RS20555 isovaleryl-CoA dehydrogenase 0.52 8
Brevundimonas sp. GW460-12-10-14-LB2 0.40 A4249_RS03810 biotin carboxylase N-terminal domain-containing protein 0.64 A4249_RS07370 isovaleryl-CoA dehydrogenase low > 48
Dinoroseobacter shibae DFL-12 0.39 Dshi_1301 Carbamoyl-phosphate synthase L chain ATP-binding (RefSeq) 0.63 Dshi_1297 acyl-CoA dehydrogenase domain protein (RefSeq) low > 64

Not shown: 1 genomes with orthologs for HSERO_RS23460 only; 0 genomes with orthologs for HSERO_RS23440 only