Conservation of cofitness between HSERO_RS16150 and HSERO_RS18935 in Herbaspirillum seropedicae SmR1

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS16150 arginyl-tRNA-protein transferase 1.0 HSERO_RS18935 LysR family transcriptional regulator 0.47 2
Paraburkholderia sabiae LMG 24235 0.72 QEN71_RS22760 arginyltransferase 0.72 QEN71_RS26625 LysR substrate-binding domain-containing protein low > 153
Burkholderia phytofirmans PsJN 0.71 BPHYT_RS08570 arginyl-tRNA-protein transferase 0.71 BPHYT_RS03470 LysR family transcriptional regulator low > 109
Paraburkholderia bryophila 376MFSha3.1 0.71 H281DRAFT_00744 arginine-tRNA-protein transferase 0.72 H281DRAFT_04673 transcriptional regulator, LysR family low > 103
Paraburkholderia graminis OAS925 0.71 ABIE53_001955 arginyl-tRNA--protein-N-Asp/Glu arginylyltransferase 0.71 ABIE53_000834 LysR family hydrogen peroxide-inducible transcriptional activator low > 113
Ralstonia solanacearum GMI1000 0.71 RS_RS08135 arginyl-tRNA-protein transferase 0.71 RS_RS13470 hydrogen peroxide-inducible genes activator 0.45 18
Ralstonia sp. UNC404CL21Col 0.70 ABZR87_RS13385 arginyltransferase 0.71 ABZR87_RS01255 LysR substrate-binding domain-containing protein low > 80
Ralstonia solanacearum PSI07 0.69 RPSI07_RS15900 arginyltransferase 0.71 RPSI07_RS11690 hydrogen peroxide-inducible genes activator low > 81
Cupriavidus basilensis FW507-4G11 0.69 RR42_RS07470 arginyl-tRNA-protein transferase 0.71 RR42_RS17385 LysR family transcriptional regulator low > 128
Ralstonia solanacearum IBSBF1503 0.69 RALBFv3_RS01590 arginyltransferase 0.72 RALBFv3_RS05605 hydrogen peroxide-inducible genes activator low > 76
Ralstonia solanacearum UW163 0.69 UW163_RS14900 arginyltransferase 0.72 UW163_RS08020 hydrogen peroxide-inducible genes activator — —
Acidovorax sp. GW101-3H11 0.68 Ac3H11_533 Arginine-tRNA-protein transferase (EC 2.3.2.8) 0.64 Ac3H11_784 Hydrogen peroxide-inducible genes activator low > 79
Dechlorosoma suillum PS 0.67 Dsui_2973 putative arginyl-tRNA:protein arginylyltransferase 0.53 Dsui_0823 transcriptional regulator low > 51
Variovorax sp. SCN45 0.66 GFF1168 Arginyl-tRNA--protein transferase (EC 2.3.2.8) 0.66 GFF5549 Hydrogen peroxide-inducible genes activator => OxyR low > 127
Variovorax sp. OAS795 0.66 ABID97_RS14925 arginyltransferase 0.65 ABID97_RS01570 LysR substrate-binding domain-containing protein 0.39 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF4284 Arginine-tRNA-protein transferase (EC 2.3.2.8) 0.62 GFF2803 Hydrogen peroxide-inducible genes activator low > 90
Castellaniella sp019104865 MT123 0.53 ABCV34_RS07785 arginyltransferase 0.66 ABCV34_RS03575 LysR substrate-binding domain-containing protein low > 48
Marinobacter adhaerens HP15 0.44 HP15_2078 arginyl-tRNA-protein transferase 0.48 HP15_308 oxidative stress regulatory protein OxyR low > 73
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_27665 arginyl-tRNA-protein transferase 0.49 AO353_09315 LysR family transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_294 Arginine-tRNA-protein transferase (EC 2.3.2.8) 0.51 Pf6N2E2_4353 Hydrogen peroxide-inducible genes activator low > 103
Pseudomonas simiae WCS417 0.42 PS417_16500 arginyl-tRNA-protein transferase 0.49 PS417_27865 LysR family transcriptional regulator low > 88
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_4057 Arginine-tRNA-protein transferase (EC 2.3.2.8) 0.49 Pf1N1B4_2106 Hydrogen peroxide-inducible genes activator low > 87
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_22160 arginyl-tRNA-protein transferase 0.49 AO356_12385 LysR family transcriptional regulator low > 104
Pseudomonas sp. RS175 0.41 PFR28_02611 Aspartate/glutamate leucyltransferase 0.50 PFR28_04434 Hydrogen peroxide-inducible genes activator low > 88
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_2648 Arginine-tRNA-protein transferase (EC 2.3.2.8) 0.49 PfGW456L13_773 Hydrogen peroxide-inducible genes activator low > 87
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS18540 arginyltransferase 0.49 PFLU_RS29545 hydrogen peroxide-inducible genes activator low > 109
Pseudomonas fluorescens SBW25 0.41 PFLU_RS18540 arginyltransferase 0.49 PFLU_RS29545 hydrogen peroxide-inducible genes activator low > 109
Pseudomonas sp. S08-1 0.41 OH686_00245 Arginyl-tRNA--protein transferase 0.48 OH686_13510 Hydrogen peroxide-inducible genes activator low > 80
Acinetobacter radioresistens SK82 0.40 MPMX26_02427 Aspartate/glutamate leucyltransferase 0.24 MPMX26_02334 Hydrogen peroxide-inducible genes activator low > 36
Pseudomonas stutzeri RCH2 0.40 Psest_2029 Putative arginyl-tRNA:protein arginylyltransferase 0.48 Psest_4191 Transcriptional regulator low > 67
Pseudomonas putida KT2440 0.40 PP_4006 Putative arginyl-tRNA--protein transferase 0.51 PP_5309 oxidative and nitrosative stress transcriptional dual regulator low > 96
Magnetospirillum magneticum AMB-1 0.40 AMB_RS12990 arginyl-tRNA-protein transferase 0.29 AMB_RS03045 hydrogen peroxide-inducible genes activator low > 64
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_3181 Arginyltransferase 0.50 Psyr_0202 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_3181 Arginyltransferase 0.50 Psyr_0202 transcriptional regulator, LysR family low > 86
Phaeobacter inhibens DSM 17395 0.36 PGA1_c20140 putative arginine-tRNA-protein transferase 0.27 PGA1_78p00040 hydrogen peroxide-inducible genes activator OxyR — —
Dinoroseobacter shibae DFL-12 0.36 Dshi_1082 Arginyltransferase (RefSeq) 0.28 Dshi_3802 transcriptional regulator, LysR family (RefSeq) low > 64
Kangiella aquimarina DSM 16071 0.36 B158DRAFT_1507 Putative arginyl-tRNA:protein arginylyltransferase 0.48 B158DRAFT_0567 Transcriptional regulator low > 40
Caulobacter crescentus NA1000 Δfur 0.35 CCNA_01643 arginine-tRNA-protein transferase 0.29 CCNA_03811 LysR-family transcriptional regulator — —
Caulobacter crescentus NA1000 0.35 CCNA_01643 arginine-tRNA-protein transferase 0.29 CCNA_03811 LysR-family transcriptional regulator low > 66
Rhodospirillum rubrum S1H 0.34 Rru_A1845 Arginyltransferase (NCBI) 0.34 Rru_A2782 Transcriptional Regulator, LysR family (NCBI) low > 58
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS21260 arginyltransferase 0.35 ABZR86_RS19355 DNA-binding transcriptional regulator OxyR low > 74
Alteromonas macleodii MIT1002 0.33 MIT1002_01836 arginyl-tRNA-protein transferase 0.21 MIT1002_01120 Morphology and auto-aggregation control protein low > 70
Rhodanobacter sp. FW510-T8 0.33 OKGIIK_03400 ate1 arginyltransferase 0.35 OKGIIK_01995 lysR DNA-binding transcriptional regulator OxyR low > 52
Lysobacter sp. OAE881 0.33 ABIE51_RS14510 arginyltransferase 0.34 ABIE51_RS05475 LysR substrate-binding domain-containing protein low > 62
Agrobacterium fabrum C58 0.33 Atu1159 arginine-tRNA-protein transferase 0.30 Atu4641 LysR family transcriptional regulator low > 89
Bosea sp. OAE506 0.33 ABIE41_RS19845 arginyltransferase 0.30 ABIE41_RS01195 hydrogen peroxide-inducible genes activator low > 77
Azospirillum brasilense Sp245 0.33 AZOBR_RS20025 arginyl-tRNA-protein transferase 0.32 AZOBR_RS31340 LysR family transcriptional regulator low > 97
Brevundimonas sp. GW460-12-10-14-LB2 0.33 A4249_RS06080 arginyltransferase 0.24 A4249_RS12755 hydrogen peroxide-inducible genes activator low > 48
Azospirillum sp. SherDot2 0.32 MPMX19_01346 Aspartate/glutamate leucyltransferase 0.31 MPMX19_05834 Hydrogen peroxide-inducible genes activator low > 112
Sinorhizobium meliloti 1021 0.32 SMc01764 arginyl-tRNA-protein transferase 0.30 SMc00818 hydrogen peroxide-inducible genes activator (morphology and AUTO-aggregation control protein) low > 103
Rhodanobacter denitrificans MT42 0.32 LRK55_RS14270 arginyltransferase 0.34 LRK55_RS04545 LysR substrate-binding domain-containing protein low > 63
Sphingomonas koreensis DSMZ 15582 0.32 Ga0059261_3693 Putative arginyl-tRNA:protein arginylyltransferase 0.28 Ga0059261_0159 Transcriptional regulator low > 68
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS14555 arginyltransferase 0.34 LRK54_RS04765 LysR substrate-binding domain-containing protein low > 59
Rhodopseudomonas palustris CGA009 0.31 TX73_014045 arginyltransferase 0.28 TX73_002235 LysR substrate-binding domain-containing protein low > 86
Rhizobium sp. OAE497 0.30 ABIE40_RS06680 arginyltransferase 0.27 ABIE40_RS15045 hydrogen peroxide-inducible genes activator low > 107
Shewanella amazonensis SB2B 0.29 Sama_2054 arginyl-tRNA-protein transferase (RefSeq) 0.22 Sama_0860 LysR family transcriptional regulator (RefSeq) low > 62
Shewanella loihica PV-4 0.28 Shew_1568 arginyl-tRNA-protein transferase (RefSeq) 0.21 Shew_1035 LysR family transcriptional regulator (RefSeq) low > 60
Shewanella sp. ANA-3 0.27 Shewana3_1755 arginyl-tRNA-protein transferase (RefSeq) 0.24 Shewana3_3046 LysR family transcriptional regulator (RefSeq) low > 73
Shewanella oneidensis MR-1 0.26 SO2624 hypothetical arginyl-tRNA:protein arginylyltransferase (NCBI ptt file) 0.24 SO1328 transcriptional regulator, LysR family (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.26 CSW01_08720 arginyltransferase 0.38 CSW01_13340 DNA-binding transcriptional regulator OxyR low > 62

Not shown: 0 genomes with orthologs for HSERO_RS16150 only; 35 genomes with orthologs for HSERO_RS18935 only