Conservation of cofitness between HSERO_RS21535 and HSERO_RS05850 in Herbaspirillum seropedicae SmR1

73 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS21535 NADH dehydrogenase 1.0 HSERO_RS05850 exodeoxyribonuclease VII large subunit 0.45 8
Burkholderia phytofirmans PsJN 0.74 BPHYT_RS26840 NADH dehydrogenase 0.52 BPHYT_RS15865 exodeoxyribonuclease VII large subunit low > 109
Paraburkholderia graminis OAS925 0.74 ABIE53_005905 alkyl hydroperoxide reductase subunit F 0.51 ABIE53_003344 exodeoxyribonuclease VII large subunit low > 113
Paraburkholderia bryophila 376MFSha3.1 0.74 H281DRAFT_02889 alkyl hydroperoxide reductase subunit F 0.53 H281DRAFT_04109 Exodeoxyribonuclease VII large subunit
Paraburkholderia sabiae LMG 24235 0.74 QEN71_RS13375 alkyl hydroperoxide reductase subunit F 0.52 QEN71_RS02835 exodeoxyribonuclease VII large subunit low > 153
Ralstonia sp. UNC404CL21Col 0.72 ABZR87_RS17240 alkyl hydroperoxide reductase subunit F 0.48 ABZR87_RS00710 exodeoxyribonuclease VII large subunit low > 80
Pseudomonas fluorescens FW300-N2C3 0.72 AO356_22810 alkyl hydroperoxide reductase subunit F 0.32 AO356_06540 exodeoxyribonuclease low > 104
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_448 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.32 Pf6N2E2_3168 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) low > 103
Pseudomonas fluorescens GW456-L13 0.71 PfGW456L13_2928 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.32 PfGW456L13_4851 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) low > 87
Pseudomonas sp. RS175 0.71 PFR28_02481 Alkyl hydroperoxide reductase subunit F 0.32 PFR28_00307 Exodeoxyribonuclease 7 large subunit low > 88
Pseudomonas fluorescens FW300-N2E3 0.71 AO353_26960 alkyl hydroperoxide reductase subunit F 0.32 AO353_15935 exodeoxyribonuclease low > 101
Pseudomonas simiae WCS417 0.71 PS417_14040 alkyl hydroperoxide reductase 0.33 PS417_23095 exodeoxyribonuclease low > 88
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_5010 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.32 Pf1N1B4_844 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) low > 87
Ralstonia solanacearum UW163 0.71 UW163_RS22810 alkyl hydroperoxide reductase subunit F 0.47 UW163_RS08565 exodeoxyribonuclease VII large subunit
Ralstonia solanacearum IBSBF1503 0.71 RALBFv3_RS22265 alkyl hydroperoxide reductase subunit F 0.47 RALBFv3_RS05060 exodeoxyribonuclease VII large subunit low > 76
Ralstonia solanacearum GMI1000 0.71 RS_RS18340 alkyl hydroperoxide reductase subunit F 0.47 RS_RS12670 exodeoxyribonuclease VII large subunit low > 80
Pseudomonas stutzeri RCH2 0.71 Psest_1134 alkyl hydroperoxide reductase, F subunit 0.34 Psest_1284 exodeoxyribonuclease VII, large subunit low > 67
Rhodanobacter denitrificans MT42 0.71 LRK55_RS00485 alkyl hydroperoxide reductase subunit F 0.34 LRK55_RS17410 exodeoxyribonuclease VII large subunit low > 63
Rhodanobacter denitrificans FW104-10B01 0.71 LRK54_RS00710 alkyl hydroperoxide reductase subunit F 0.33 LRK54_RS17185 exodeoxyribonuclease VII large subunit low > 59
Ralstonia solanacearum PSI07 0.70 RPSI07_RS00935 alkyl hydroperoxide reductase subunit F 0.46 RPSI07_RS12235 exodeoxyribonuclease VII large subunit low > 81
Rhodanobacter sp. FW510-T8 0.70 OKGIIK_06550 ahpF alkyl hydroperoxide reductase subunit F 0.33 OKGIIK_07700 xseA exodeoxyribonuclease VII large subunit low > 52
Pseudomonas putida KT2440 0.70 PP_2440 Alkyl hydroperoxide reductase subunit F 0.31 PP_1027 Exodeoxyribonuclease 7 large subunit low > 96
Castellaniella sp019104865 MT123 0.70 ABCV34_RS09915 alkyl hydroperoxide reductase subunit F 0.40 ABCV34_RS05330 exodeoxyribonuclease VII large subunit low > 48
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_2974 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 0.32 Psyr_1259 Exodeoxyribonuclease VII large subunit low > 86
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_2974 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 0.32 Psyr_1259 Exodeoxyribonuclease VII large subunit low > 86
Dyella japonica UNC79MFTsu3.2 0.69 ABZR86_RS08495 alkyl hydroperoxide reductase subunit F 0.34 ABZR86_RS06815 exodeoxyribonuclease VII large subunit low > 74
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS14575 alkyl hydroperoxide reductase subunit F 0.33 PFLU_RS24755 exodeoxyribonuclease VII large subunit low > 109
Pseudomonas fluorescens SBW25 0.69 PFLU_RS14575 alkyl hydroperoxide reductase subunit F 0.33 PFLU_RS24755 exodeoxyribonuclease VII large subunit low > 109
Lysobacter sp. OAE881 0.69 ABIE51_RS05480 alkyl hydroperoxide reductase subunit F 0.31 ABIE51_RS13750 exodeoxyribonuclease VII large subunit low > 62
Rhodospirillum rubrum S1H 0.68 Rru_A1417 thioredoxin-disulfide reductase (NCBI) 0.22 Rru_A0159 Exodeoxyribonuclease VII (NCBI) 0.80 26
Pseudomonas sp. S08-1 0.68 OH686_18675 alkyl hydroperoxide reductase subunit F 0.32 OH686_17580 exodeoxyribonuclease VII, large subunit low > 80
Variovorax sp. SCN45 0.67 GFF2825 Alkyl hydroperoxide reductase protein F 0.34 GFF349 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) low > 127
Dechlorosoma suillum PS 0.67 Dsui_1902 alkyl hydroperoxide reductase, F subunit 0.46 Dsui_3268 exodeoxyribonuclease VII, large subunit low > 51
Xanthomonas campestris pv. campestris strain 8004 0.67 Xcc-8004.4222.1 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.33 Xcc-8004.2251.1 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) low > 74
Acidovorax sp. GW101-3H11 0.66 Ac3H11_232 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.33 Ac3H11_2382 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) low > 79
Brevundimonas sp. GW460-12-10-14-LB2 0.65 A4249_RS04545 alkyl hydroperoxide reductase subunit F 0.23 A4249_RS09265 exodeoxyribonuclease VII large subunit low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.65 GFF3915 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.35 GFF4511 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) low > 90
Caulobacter crescentus NA1000 0.65 CCNA_03013 alkyl hydroperoxide reductase subunit F 0.25 CCNA_02329 exodeoxyribonuclease VII large subunit low > 66
Caulobacter crescentus NA1000 Δfur 0.65 CCNA_03013 alkyl hydroperoxide reductase subunit F 0.25 CCNA_02329 exodeoxyribonuclease VII large subunit low > 67
Marinobacter adhaerens HP15 0.64 HP15_3619 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 0.35 HP15_2052 exodeoxyribonuclease VII large subunit low > 73
Sphingomonas koreensis DSMZ 15582 0.63 Ga0059261_0156 alkyl hydroperoxide reductase subunit F 0.23 Ga0059261_1440 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)
Shewanella sp. ANA-3 0.62 Shewana3_3326 FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq) 0.34 Shewana3_1234 xseA exodeoxyribonuclease VII large subunit (RefSeq) low > 73
Shewanella oneidensis MR-1 0.62 SO0956 ahpF alkyl hydroperoxide reductase, F subunit (NCBI ptt file) 0.34 SO3294 xseA exodeoxyribonuclease VII, large subunit (NCBI ptt file) low > 76
Klebsiella michiganensis M5al 0.62 BWI76_RS07945 alkyl hydroperoxide reductase subunit F 0.36 BWI76_RS21035 exodeoxyribonuclease VII large subunit low > 92
Shewanella amazonensis SB2B 0.61 Sama_0618 alkyl hydroperoxide reductase, F subunit (RefSeq) 0.33 Sama_2360 xseA exodeoxyribonuclease VII large subunit (RefSeq) low > 62
Enterobacter asburiae PDN3 0.60 EX28DRAFT_2349 alkyl hydroperoxide reductase subunit F 0.36 EX28DRAFT_0138 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) low > 76
Shewanella loihica PV-4 0.60 Shew_0793 FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq) 0.33 Shew_1296 xseA exodeoxyribonuclease VII large subunit (RefSeq) low > 60
Escherichia coli ECRC99 0.60 KEDOAH_20465 Alkyl hydroperoxide reductase subunit F 0.35 KEDOAH_06465 xseA exodeoxyribonuclease VII large subunit
Escherichia fergusonii Becca 0.60 EFB2_03485 Alkyl hydroperoxide reductase subunit F 0.35 EFB2_01384 Exodeoxyribonuclease 7 large subunit low > 86
Escherichia coli ECRC100 0.60 OKFHMN_07505 Alkyl hydroperoxide reductase subunit F 0.35 OKFHMN_21755 xseA exodeoxyribonuclease VII large subunit low > 80
Escherichia coli ECRC62 0.60 BNILDI_21890 Alkyl hydroperoxide reductase subunit F 0.36 BNILDI_12205 xseA exodeoxyribonuclease VII large subunit low > 75
Escherichia coli ECRC98 0.60 JDDGAC_11150 Alkyl hydroperoxide reductase subunit F 0.35 JDDGAC_25430 xseA exodeoxyribonuclease VII large subunit low > 86
Escherichia coli ECRC101 0.60 MCAODC_26720 Alkyl hydroperoxide reductase subunit F 0.35 MCAODC_12285 xseA exodeoxyribonuclease VII large subunit low > 87
Pectobacterium carotovorum WPP14 0.60 HER17_RS02550 alkyl hydroperoxide reductase subunit F 0.35 HER17_RS06150 exodeoxyribonuclease VII large subunit low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_03099 Alkyl hydroperoxide reductase subunit F 0.36 OHPLBJKB_01200 Exodeoxyribonuclease 7 large subunit low > 73
Escherichia coli ECOR38 0.60 HEPCGN_00775 Alkyl hydroperoxide reductase subunit F 0.35 HEPCGN_20895 xseA exodeoxyribonuclease VII large subunit low > 87
Escherichia coli ECOR27 0.60 NOLOHH_23880 Alkyl hydroperoxide reductase subunit F 0.36 NOLOHH_13405 xseA exodeoxyribonuclease VII large subunit low > 75
Escherichia coli ECRC102 0.60 NIAGMN_05560 Alkyl hydroperoxide reductase subunit F 0.35 NIAGMN_19525 xseA exodeoxyribonuclease VII large subunit
Pantoea sp. MT58 0.60 IAI47_06795 alkyl hydroperoxide reductase subunit F 0.35 IAI47_05100 exodeoxyribonuclease VII large subunit low > 76
Escherichia coli Nissle 1917 0.60 ECOLIN_RS03325 alkyl hydroperoxide reductase subunit F 0.35 ECOLIN_RS14245 exodeoxyribonuclease VII large subunit low > 55
Escherichia coli BL21 0.60 ECD_00575 alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-binding 0.36 ECD_02401 exonuclease VII, large subunit low > 61
Escherichia coli BW25113 0.60 b0606 ahpF alkyl hydroperoxide reductase, F52a subunit; detoxification of hydroperoxides (VIMSS) 0.36 b2509 xseA exodeoxyribonuclease VII large subunit (NCBI) low > 76
Enterobacter sp. TBS_079 0.60 MPMX20_01272 Alkyl hydroperoxide reductase subunit F 0.36 MPMX20_03383 Exodeoxyribonuclease 7 large subunit low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF4514 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 0.35 GFF2159 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)
Acinetobacter radioresistens SK82 0.59 MPMX26_02042 Alkyl hydroperoxide reductase subunit F 0.11 MPMX26_01581 Exodeoxyribonuclease 7 large subunit
Dickeya dianthicola ME23 0.59 DZA65_RS02570 alkyl hydroperoxide reductase subunit F 0.36 DZA65_RS16615 exodeoxyribonuclease VII large subunit low > 75
Dickeya dianthicola 67-19 0.59 HGI48_RS02465 alkyl hydroperoxide reductase subunit F 0.36 HGI48_RS15540 exodeoxyribonuclease VII large subunit low > 71
Dickeya dadantii 3937 0.59 DDA3937_RS02520 alkyl hydroperoxide reductase subunit F 0.36 DDA3937_RS15425 exodeoxyribonuclease VII large subunit low > 74
Alteromonas macleodii MIT1002 0.46 MIT1002_01785 NADH dehydrogenase 0.34 MIT1002_02780 Exodeoxyribonuclease 7 large subunit low > 70
Kangiella aquimarina DSM 16071 0.43 B158DRAFT_0279 alkyl hydroperoxide reductase, F subunit 0.35 B158DRAFT_1157 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) low > 40
Bacteroides ovatus ATCC 8483 0.42 BACOVA_02067 alkyl hydroperoxide reductase, F subunit 0.13 BACOVA_01111 Exonuclease VII, large subunit low > 94
Parabacteroides merdae CL09T00C40 0.40 HMPREF1078_RS04200 alkyl hydroperoxide reductase subunit F 0.15 HMPREF1078_RS12780 exodeoxyribonuclease VII large subunit low > 61
Phocaeicola dorei CL03T12C01 0.40 ABI39_RS03990 alkyl hydroperoxide reductase subunit F 0.12 ABI39_RS01425 exodeoxyribonuclease VII large subunit low > 72
Phocaeicola vulgatus CL09T03C04 0.39 HMPREF1058_RS09535 alkyl hydroperoxide reductase subunit F 0.12 HMPREF1058_RS02230 exodeoxyribonuclease VII large subunit low > 67

Not shown: 4 genomes with orthologs for HSERO_RS21535 only; 21 genomes with orthologs for HSERO_RS05850 only