Conservation of cofitness between HSERO_RS05455 and HSERO_RS01240 in Herbaspirillum seropedicae SmR1

72 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS05455 gamma-glutamyltranspeptidase 1.0 HSERO_RS01240 RNA-binding protein S4 0.38 16
Acidovorax sp. GW101-3H11 0.68 Ac3H11_1090 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.44 Ac3H11_56 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) low > 79
Castellaniella sp019104865 MT123 0.65 ABCV34_RS11415 gamma-glutamyltransferase 0.39 ABCV34_RS06005 RNA-binding S4 domain-containing protein low > 48
Klebsiella michiganensis M5al 0.59 BWI76_RS26275 gamma-glutamyltransferase 0.33 BWI76_RS26145 heat-shock protein Hsp15 low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF561 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.35 GFF619 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) low > 78
Escherichia coli ECOR38 0.58 HEPCGN_15620 ggt gamma-glutamyltransferase 0.34 HEPCGN_15880 hslR ribosome-associated heat shock protein Hsp15 low > 87
Escherichia coli ECRC100 0.58 OKFHMN_16800 ggt gamma-glutamyltransferase 0.34 OKFHMN_17060 hslR ribosome-associated heat shock protein Hsp15 low > 80
Escherichia fergusonii Becca 0.58 EFB2_00375 Glutathione hydrolase proenzyme 0.34 EFB2_00428 Heat shock protein 15 low > 86
Escherichia coli ECRC99 0.58 KEDOAH_11340 ggt gamma-glutamyltransferase 0.34 KEDOAH_11080 hslR ribosome-associated heat shock protein Hsp15 — —
Shewanella amazonensis SB2B 0.58 Sama_1566 gamma-glutamyltransferase (RefSeq) 0.40 Sama_0167 heat shock protein 15 (RefSeq) low > 62
Escherichia coli ECRC102 0.58 NIAGMN_14570 ggt gamma-glutamyltransferase 0.34 NIAGMN_14830 hslR ribosome-associated heat shock protein Hsp15 — —
Escherichia coli ECRC98 0.58 JDDGAC_20430 ggt gamma-glutamyltransferase 0.34 JDDGAC_20690 hslR ribosome-associated heat shock protein Hsp15 low > 86
Escherichia coli Nissle 1917 0.58 ECOLIN_RS19715 gamma-glutamyltransferase 0.34 ECOLIN_RS19415 ribosome-associated heat shock protein Hsp15 low > 55
Escherichia coli ECRC62 0.58 BNILDI_02915 ggt gamma-glutamyltransferase 0.34 BNILDI_02670 hslR ribosome-associated heat shock protein Hsp15 low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.58 OHPLBJKB_00256 Glutathione hydrolase proenzyme 0.34 OHPLBJKB_00303 Heat shock protein 15 low > 73
Escherichia coli ECOR27 0.58 NOLOHH_08590 ggt gamma-glutamyltransferase 0.34 NOLOHH_08850 hslR ribosome-associated heat shock protein Hsp15 low > 75
Escherichia coli ECRC101 0.58 MCAODC_07330 ggt gamma-glutamyltransferase 0.34 MCAODC_07590 hslR ribosome-associated heat shock protein Hsp15 low > 87
Escherichia coli BW25113 0.58 b3447 ggt gamma-glutamyltranspeptidase periplasmic precursor (NCBI) 0.34 b3400 hslR ribosome-associated heat shock protein Hsp15 (NCBI) low > 76
Escherichia coli BL21 0.58 ECD_03296 gamma-glutamyltranspeptidase 0.33 ECD_03252 ribosome-associated heat shock protein Hsp15 low > 61
Enterobacter asburiae PDN3 0.58 EX28DRAFT_4279 gamma-glutamyltranspeptidase 0.33 EX28DRAFT_4142 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) low > 76
Shewanella loihica PV-4 0.57 Shew_2158 gamma-glutamyltransferase (RefSeq) 0.36 Shew_3621 RNA-binding S4 domain-containing protein (RefSeq) low > 60
Enterobacter sp. TBS_079 0.57 MPMX20_04323 Glutathione hydrolase proenzyme 0.32 MPMX20_04288 Heat shock protein 15 low > 85
Erwinia tracheiphila SCR3 0.56 LU632_RS19180 ggt gamma-glutamyltransferase 0.35 LU632_RS22920 hslR ribosome-associated heat shock protein Hsp15 low > 74
Pantoea sp. MT58 0.56 IAI47_01620 gamma-glutamyltransferase 0.33 IAI47_01840 ribosome-associated heat shock protein Hsp15 low > 76
Shewanella oneidensis MR-1 0.56 SO1952 ggt-2 gamma-glutamyltranspeptidase (NCBI ptt file) 0.37 SO0164 hslR heat shock protein 15 (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.55 Shewana3_2487 gamma-glutamyltransferase 1 (RefSeq) 0.37 Shewana3_0149 RNA-binding S4 domain-containing protein (RefSeq) low > 73
Marinobacter adhaerens HP15 0.52 HP15_1357 gamma-glutamyltranspeptidase periplasmic precursor 0.37 HP15_3496 RNA-binding S4 domain protein low > 73
Kangiella aquimarina DSM 16071 0.52 B158DRAFT_2377 gamma-glutamyltranspeptidase 0.38 B158DRAFT_0687 heat shock protein Hsp15 low > 40
Ralstonia solanacearum PSI07 0.45 RPSI07_RS01100 gamma-glutamyltransferase 0.57 RPSI07_RS11935 RNA-binding S4 domain-containing protein — —
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS19795 gamma-glutamyltransferase 0.55 ABZR87_RS01005 RNA-binding S4 domain-containing protein low > 80
Serratia liquefaciens MT49 0.45 IAI46_04820 gamma-glutamyltransferase 0.34 IAI46_23760 ribosome-associated heat shock protein Hsp15 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_0691 gamma-glutamyltransferase 1, Threonine peptidase, MEROPS family T03 0.36 Psyr_0170 heat shock protein Hsp15 low > 86
Variovorax sp. OAS795 0.45 ABID97_RS09895 gamma-glutamyltransferase 0.43 ABID97_RS17750 RNA-binding S4 domain-containing protein low > 91
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_0691 gamma-glutamyltransferase 1, Threonine peptidase, MEROPS family T03 0.36 Psyr_0170 heat shock protein Hsp15 low > 86
Rhizobium sp. OAE497 0.45 ABIE40_RS16090 gamma-glutamyltransferase 0.25 ABIE40_RS18660 RNA-binding S4 domain-containing protein low > 107
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS13685 gamma-glutamyltransferase 0.32 PFLU_RS01305 RNA-binding protein S4 low > 109
Pseudomonas fluorescens SBW25 0.45 PFLU_RS13685 gamma-glutamyltransferase 0.32 PFLU_RS01305 RNA-binding protein S4 low > 109
Dickeya dianthicola ME23 0.45 DZA65_RS14700 gamma-glutamyltransferase 0.32 DZA65_RS20815 ribosome-associated heat shock protein Hsp15 low > 75
Ralstonia solanacearum GMI1000 0.45 RS_RS18475 gamma-glutamyltransferase 0.54 RS_RS13230 RNA-binding S4 domain-containing protein low > 80
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS22085 gamma-glutamyltransferase 0.56 RALBFv3_RS05370 RNA-binding S4 domain-containing protein low > 76
Ralstonia solanacearum UW163 0.45 UW163_RS22625 gamma-glutamyltransferase 0.56 UW163_RS08255 RNA-binding S4 domain-containing protein — —
Rahnella sp. WP5 0.45 EX31_RS22075 gamma-glutamyltransferase 0.33 EX31_RS04770 ribosome-associated heat shock protein Hsp15 low > 89
Pseudomonas simiae WCS417 0.45 PS417_13045 gamma-glutamyltranspeptidase 0.32 PS417_01195 RNA-binding protein S4 low > 88
Pseudomonas fluorescens GW456-L13 0.44 PfGW456L13_2671 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.33 PfGW456L13_423 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) low > 87
Dickeya dadantii 3937 0.44 DDA3937_RS14030 gamma-glutamyltransferase 0.32 DDA3937_RS19600 ribosome-associated heat shock protein Hsp15 low > 74
Variovorax sp. SCN45 0.44 GFF3077 Gamma-glutamyltranspeptidase (EC 2.3.2.2) @ Glutathione hydrolase (EC 3.4.19.13) 0.44 GFF528 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) low > 127
Dickeya dianthicola 67-19 0.44 HGI48_RS14025 gamma-glutamyltransferase 0.32 HGI48_RS19730 ribosome-associated heat shock protein Hsp15 low > 71
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_22255 gamma-glutamyltranspeptidase 0.32 AO356_10150 RNA-binding protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_313 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.32 Pf6N2E2_3901 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) low > 103
Pseudomonas sp. RS175 0.44 PFR28_02593 Glutathione hydrolase proenzyme 0.28 PFR28_04872 Heat shock protein 15 low > 88
Pectobacterium carotovorum WPP14 0.44 HER17_RS00330 gamma-glutamyltransferase 0.34 HER17_RS01720 ribosome-associated heat shock protein Hsp15 low > 75
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_4081 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.33 Pf1N1B4_1776 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) — —
Pedobacter sp. GW460-11-11-14-LB5 0.42 CA265_RS17620 gamma-glutamyltransferase 0.29 CA265_RS03000 RNA-binding protein low > 88
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS14675 gamma-glutamyltransferase 0.55 QEN71_RS26515 RNA-binding S4 domain-containing protein low > 153
Alteromonas macleodii MIT1002 0.36 MIT1002_00538 Gamma-glutamyltranspeptidase precursor 0.37 MIT1002_03974 Heat shock protein 15 low > 70
Pseudomonas putida KT2440 0.36 PP_4659 gamma-glutamyltranspeptidase 0.35 PP_0250 heat shock protein Hsp15 involved in ribosome recycling low > 96
Burkholderia phytofirmans PsJN 0.36 BPHYT_RS21360 gamma-glutamyltranspeptidase 0.54 BPHYT_RS03580 RNA-binding protein S4 low > 109
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_01608 gamma-glutamyltransferase 1 Threonine peptidase. MEROPS family T03 0.54 H281DRAFT_04696 heat shock protein Hsp15 low > 103
Paraburkholderia graminis OAS925 0.35 ABIE53_004289 gamma-glutamyltranspeptidase/glutathione hydrolase 0.52 ABIE53_000860 ribosome-associated heat shock protein Hsp15 low > 113
Lysobacter sp. OAE881 0.35 ABIE51_RS15105 gamma-glutamyltransferase 0.37 ABIE51_RS07770 RNA-binding S4 domain-containing protein low > 62
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.2158.1 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.36 Xcc-8004.3763.1 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) — —
Pseudomonas stutzeri RCH2 0.34 Psest_1413 gamma-glutamyltranspeptidase 0.34 Psest_3991 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) low > 67
Rhodanobacter denitrificans MT42 0.32 LRK55_RS13100 gamma-glutamyltransferase 0.38 LRK55_RS14635 RNA-binding S4 domain-containing protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.31 LRK54_RS13360 gamma-glutamyltransferase 0.38 LRK54_RS14920 RNA-binding S4 domain-containing protein low > 59
Rhodanobacter sp. FW510-T8 0.31 OKGIIK_02600 ggt gamma-glutamyltransferase 0.36 OKGIIK_03690 RNA-binding protein — —
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS20010 gamma-glutamyltransferase 0.34 ABZR86_RS00605 S4 domain-containing protein low > 74
Vibrio cholerae E7946 ATCC 55056 0.28 CSW01_01035 gamma-glutamyltransferase 0.36 CSW01_13800 heat-shock protein Hsp15 low > 62
Agrobacterium fabrum C58 0.28 Atu5507 gamma-glutamyltranspeptidase 0.26 Atu2752 hypothetical protein low > 89
Phaeobacter inhibens DSM 17395 0.25 PGA1_c28250 gamma-glutamyltranspeptidase Ggt 0.33 PGA1_c07520 putative heat shock protein low > 62
Azospirillum brasilense Sp245 0.24 AZOBR_RS03085 gamma-glutamyltransferase 0.31 AZOBR_RS00975 tRNA synthetase RNA-binding protein low > 97
Pseudomonas sp. S08-1 0.23 OH686_14140 gamma-glutamyltransferase 0.35 OH686_11070 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit low > 80
Pseudomonas fluorescens FW300-N2E3 0.21 AO353_14670 gamma-glutamyltransferase 0.34 AO353_11765 RNA-binding protein low > 101
Cupriavidus basilensis FW507-4G11 0.21 RR42_RS26175 gamma-glutamyltransferase 0.51 RR42_RS05930 RNA-binding protein S4 low > 128

Not shown: 15 genomes with orthologs for HSERO_RS05455 only; 9 genomes with orthologs for HSERO_RS01240 only