Conservation of cofitness between HSERO_RS01325 and HSERO_RS00435 in Herbaspirillum seropedicae SmR1

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS01325 cation/multidrug efflux protein 1.0 HSERO_RS00435 glutathione synthetase 0.43 5
Paraburkholderia bryophila 376MFSha3.1 0.73 H281DRAFT_05197 Multidrug efflux pump subunit AcrB 0.66 H281DRAFT_02010 glutathione synthase low > 103
Paraburkholderia graminis OAS925 0.72 ABIE53_002354 multidrug efflux pump 0.67 ABIE53_000657 glutathione synthase 0.35 30
Paraburkholderia sabiae LMG 24235 0.71 QEN71_RS07190 efflux RND transporter permease subunit 0.70 QEN71_RS01415 glutathione synthase low > 153
Burkholderia phytofirmans PsJN 0.71 BPHYT_RS11375 acriflavin resistance protein 0.68 BPHYT_RS02560 glutathione synthetase low > 109
Dyella japonica UNC79MFTsu3.2 0.67 ABZR86_RS11125 efflux RND transporter permease subunit 0.47 ABZR86_RS10370 glutathione synthase — —
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS06185 efflux RND transporter permease subunit 0.46 PFLU_RS28320 glutathione synthase low > 109
Pseudomonas fluorescens SBW25 0.50 PFLU_RS06185 efflux RND transporter permease subunit 0.46 PFLU_RS28320 glutathione synthase low > 109
Pseudomonas stutzeri RCH2 0.50 Psest_1566 Cation/multidrug efflux pump 0.48 Psest_0296 glutathione synthetase, prokaryotic low > 67
Pseudomonas simiae WCS417 0.50 PS417_06115 multidrug transporter AcrB 0.46 PS417_26675 glutathione synthetase — —
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_16365 multidrug transporter AcrB 0.45 AO353_08110 glutathione synthetase low > 101
Pseudomonas fluorescens GW456-L13 0.50 PfGW456L13_4730 RND efflux transporter 0.46 PfGW456L13_1021 Glutathione synthetase (EC 6.3.2.3) low > 87
Pseudomonas sp. S08-1 0.49 OH686_06740 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) 0.45 OH686_10915 glutathione synthase low > 80
Dechlorosoma suillum PS 0.49 Dsui_0408 cation/multidrug efflux pump 0.58 Dsui_0746 glutathione synthetase low > 51
Pseudomonas fluorescens FW300-N1B4 0.49 Pf1N1B4_3063 RND efflux transporter 0.45 Pf1N1B4_2352 Glutathione synthetase (EC 6.3.2.3) low > 87
Pseudomonas fluorescens FW300-N2E2 0.49 Pf6N2E2_3091 RND efflux transporter 0.46 Pf6N2E2_4612 Glutathione synthetase (EC 6.3.2.3) low > 103
Acinetobacter radioresistens SK82 0.49 MPMX26_03010 Cobalt-zinc-cadmium resistance protein CzcA 0.50 MPMX26_02936 Glutathione synthetase low > 36
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_06130 multidrug transporter AcrB 0.46 AO356_13475 glutathione synthetase low > 104
Pseudomonas putida KT2440 0.49 PP_1517 RND efflux transporter 0.46 PP_4993 Glutathione synthetase low > 96
Pseudomonas sp. RS175 0.49 PFR28_00379 Cobalt-zinc-cadmium resistance protein CzcA 0.46 PFR28_04232 Glutathione synthetase low > 88
Lysobacter sp. OAE881 0.48 ABIE51_RS17595 efflux RND transporter permease subunit 0.47 ABIE51_RS05210 glutathione synthase — —
Azospirillum sp. SherDot2 0.48 MPMX19_05260 Cobalt-zinc-cadmium resistance protein CzcA 0.40 MPMX19_02474 Glutathione synthetase — —
Ralstonia solanacearum UW163 0.46 UW163_RS14695 AcrB/AcrD/AcrF family protein 0.69 UW163_RS02720 glutathione synthase — —
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS01385 AcrB/AcrD/AcrF family protein 0.69 RALBFv3_RS10860 glutathione synthase low > 76
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS13180 efflux RND transporter permease subunit 0.69 ABZR87_RS06710 glutathione synthase low > 80
Ralstonia solanacearum PSI07 0.46 RPSI07_RS16100 AcrB/AcrD/AcrF family protein 0.70 RPSI07_RS22450 glutathione synthase low > 81
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS07915 multidrug transporter AcrB 0.70 RR42_RS01780 glutathione synthetase low > 128
Ralstonia solanacearum GMI1000 0.46 RS_RS08335 AcrB/AcrD/AcrF family protein 0.70 RS_RS01700 glutathione synthetase low > 80
Rhodopseudomonas palustris CGA009 0.44 TX73_022880 efflux RND transporter permease subunit 0.35 TX73_001670 glutathione synthase — —
Acidovorax sp. GW101-3H11 0.43 Ac3H11_933 Probable transmembrane drug efflux protein 0.65 Ac3H11_711 Glutathione synthetase (EC 6.3.2.3) low > 79
Variovorax sp. SCN45 0.43 GFF493 RND efflux system, inner membrane transporter 0.66 GFF6322 Glutathione synthetase (EC 6.3.2.3) low > 127
Variovorax sp. OAS795 0.43 ABID97_RS17615 efflux RND transporter permease subunit 0.66 ABID97_RS04630 glutathione synthase low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF4033 Probable transmembrane drug efflux protein 0.63 GFF2650 Glutathione synthetase (EC 6.3.2.3) low > 90
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_0346 Acriflavin resistance protein 0.47 Psyr_0487 glutathione synthase low > 86
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_0346 Acriflavin resistance protein 0.47 Psyr_0487 glutathione synthase low > 86
Rhizobium sp. OAE497 0.42 ABIE40_RS17045 efflux RND transporter permease subunit 0.34 ABIE40_RS01405 glutathione synthase low > 107
Sinorhizobium meliloti 1021 0.42 SM_b20345 efflux protein 0.34 SMc00419 glutathione synthetase low > 103
Agrobacterium fabrum C58 0.40 Atu5381 AcrB/AcrD/AcrF family protein 0.33 Atu0310 glutathione synthetase — —
Pectobacterium carotovorum WPP14 0.38 HER17_RS07500 efflux RND transporter permease subunit 0.48 HER17_RS02635 glutathione synthase low > 75
Bosea sp. OAE506 0.38 ABIE41_RS18635 efflux RND transporter permease subunit 0.35 ABIE41_RS03330 glutathione synthase — —
Dickeya dianthicola ME23 0.38 DZA65_RS08250 efflux RND transporter permease subunit 0.49 DZA65_RS19630 glutathione synthase low > 75
Rahnella sp. WP5 0.38 EX31_RS17700 efflux RND transporter permease subunit 0.49 EX31_RS02665 glutathione synthase low > 89
Dickeya dadantii 3937 0.37 DDA3937_RS04730 efflux RND transporter permease subunit 0.49 DDA3937_RS18560 glutathione synthase low > 74
Dickeya dianthicola 67-19 0.35 HGI48_RS07915 efflux RND transporter permease subunit 0.49 HGI48_RS18495 glutathione synthase low > 71
Klebsiella michiganensis M5al 0.35 BWI76_RS05720 cation/multidrug efflux pump 0.48 BWI76_RS24075 glutathione synthase low > 92
Enterobacter sp. TBS_079 0.35 MPMX20_02160 Nickel and cobalt resistance protein CnrA 0.47 MPMX20_03805 Glutathione synthetase low > 85
Pantoea sp. MT58 0.35 IAI47_21725 efflux RND transporter permease subunit 0.47 IAI47_03615 glutathione synthase low > 76
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.557.1 cation efflux system protein 0.46 Xcc-8004.1501.1 Glutathione synthetase (EC 6.3.2.3) — —
Enterobacter asburiae PDN3 0.35 EX28DRAFT_1393 Cation/multidrug efflux pump 0.47 EX28DRAFT_2985 glutathione synthase (EC 6.3.2.3) low > 76
Azospirillum brasilense Sp245 0.34 AZOBR_RS32765 multidrug transporter 0.39 AZOBR_RS02170 glutathione synthetase low > 97
Caulobacter crescentus NA1000 0.34 CCNA_01866 cation/multidrug efflux pump acrB4 0.34 CCNA_00140 glutathione synthetase — —
Caulobacter crescentus NA1000 Δfur 0.34 CCNA_01866 cation/multidrug efflux pump acrB4 0.34 CCNA_00140 glutathione synthetase — —
Marinobacter adhaerens HP15 0.33 HP15_1118 transporter, AcrB/D/F family 0.47 HP15_3512 glutathione synthetase low > 73
Vibrio cholerae E7946 ATCC 55056 0.27 CSW01_08410 AcrB/AcrD/AcrF family protein 0.50 CSW01_02490 glutathione synthetase low > 62
Shewanella sp. ANA-3 0.26 Shewana3_3849 acriflavin resistance protein (RefSeq) 0.51 Shewana3_3445 glutathione synthetase (RefSeq) low > 73
Shewanella loihica PV-4 0.25 Shew_0466 acriflavin resistance protein (RefSeq) 0.53 Shew_3225 glutathione synthetase (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.25 MIT1002_01561 Swarming motility protein SwrC 0.47 MIT1002_03055 Glutathione synthetase low > 70
Shewanella amazonensis SB2B 0.25 Sama_0675 AcrB/AcrD/AcrF family transporter (RefSeq) 0.51 Sama_0574 glutathione synthetase (RefSeq) low > 62
Dinoroseobacter shibae DFL-12 0.24 Dshi_1262 acriflavin resistance protein (RefSeq) 0.34 Dshi_2829 glutathione synthetase (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.21 PGA1_c24610 integral membrane protein, AcrB/AcrD/AcrF family 0.36 PGA1_c26710 glutathione synthetase GshB — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.20 CA264_20140 acriflavin resistance protein 0.22 CA264_17395 glutathione synthetase low > 74
Shewanella oneidensis MR-1 0.15 SO3279 AcrB/AcrD/AcrF family protein (NCBI ptt file) 0.52 SO0831 gshB glutathione synthetase (NCBI ptt file) low > 76

Not shown: 7 genomes with orthologs for HSERO_RS01325 only; 26 genomes with orthologs for HSERO_RS00435 only