Conservation of cofitness between HER17_RS17265 and HER17_RS12795 in Pectobacterium carotovorum WPP14

77 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS17265 oxygen-dependent coproporphyrinogen oxidase 1.0 HER17_RS12795 S-formylglutathione hydrolase 0.94 2
Dickeya dadantii 3937 0.81 DDA3937_RS04365 oxygen-dependent coproporphyrinogen oxidase 0.77 DDA3937_RS09320 S-formylglutathione hydrolase
Rahnella sp. WP5 0.80 EX31_RS20260 oxygen-dependent coproporphyrinogen oxidase 0.81 EX31_RS18720 S-formylglutathione hydrolase low > 89
Dickeya dianthicola 67-19 0.80 HGI48_RS04355 oxygen-dependent coproporphyrinogen oxidase 0.76 HGI48_RS09345 S-formylglutathione hydrolase low > 71
Dickeya dianthicola ME23 0.79 DZA65_RS04275 oxygen-dependent coproporphyrinogen oxidase 0.77 DZA65_RS09650 S-formylglutathione hydrolase
Serratia liquefaciens MT49 0.78 IAI46_18545 oxygen-dependent coproporphyrinogen oxidase 0.77 IAI46_07880 S-formylglutathione hydrolase low > 86
Pantoea sp. MT58 0.76 IAI47_05360 oxygen-dependent coproporphyrinogen oxidase 0.75 IAI47_06700 S-formylglutathione hydrolase
Erwinia tracheiphila SCR3 0.75 LU632_RS06720 hemF oxygen-dependent coproporphyrinogen oxidase 0.71 LU632_RS17275 fghA S-formylglutathione hydrolase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF2066 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.77 GFF3784 S-formylglutathione hydrolase (EC 3.1.2.12) low > 78
Escherichia coli ECRC62 0.73 BNILDI_12640 hemF oxygen-dependent coproporphyrinogen oxidase 0.71 BNILDI_14005 yeiG S-formylglutathione hydrolase low > 75
Escherichia coli ECOR27 0.73 NOLOHH_13775 hemF oxygen-dependent coproporphyrinogen oxidase 0.71 NOLOHH_15085 yeiG S-formylglutathione hydrolase low > 75
Escherichia coli Nissle 1917 0.73 ECOLIN_RS13965 oxygen-dependent coproporphyrinogen oxidase 0.71 ECOLIN_RS12610 S-formylglutathione hydrolase low > 55
Escherichia coli BL21 0.73 ECD_02336 coproporphyrinogen III oxidase 0.71 ECD_02083 S-formylglutathione hydrolase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_01286 Oxygen-dependent coproporphyrinogen-III oxidase 0.71 OHPLBJKB_01557 S-formylglutathione hydrolase YeiG low > 73
Escherichia coli BW25113 0.73 b2436 hemF coproporphyrinogen III oxidase (NCBI) 0.71 b2154 yeiG predicted esterase (NCBI) low > 76
Escherichia coli ECOR38 0.73 HEPCGN_21270 hemF oxygen-dependent coproporphyrinogen oxidase 0.71 HEPCGN_22780 yeiG S-formylglutathione hydrolase low > 87
Enterobacter sp. TBS_079 0.72 MPMX20_03323 Oxygen-dependent coproporphyrinogen-III oxidase 0.71 MPMX20_03125 S-formylglutathione hydrolase YeiG low > 85
Shewanella loihica PV-4 0.72 Shew_3729 coproporphyrinogen III oxidase (RefSeq) 0.64 Shew_1541 carboxylesterase (RefSeq) low > 60
Enterobacter asburiae PDN3 0.72 EX28DRAFT_0199 coproporphyrinogen oxidase (EC 1.3.3.3) 0.72 EX28DRAFT_0402 S-formylglutathione hydrolase low > 76
Escherichia fergusonii Becca 0.72 EFB2_01443 Oxygen-dependent coproporphyrinogen-III oxidase 0.71 EFB2_01702 S-formylglutathione hydrolase YeiG low > 86
Escherichia coli ECRC98 0.71 JDDGAC_26045 hemF oxygen-dependent coproporphyrinogen oxidase 0.71 JDDGAC_27470 yeiG S-formylglutathione hydrolase low > 86
Escherichia coli ECRC102 0.71 NIAGMN_19865 hemF oxygen-dependent coproporphyrinogen oxidase 0.71 NIAGMN_21275 yeiG S-formylglutathione hydrolase
Escherichia coli ECRC100 0.71 OKFHMN_22095 hemF oxygen-dependent coproporphyrinogen oxidase 0.71 OKFHMN_23510 yeiG S-formylglutathione hydrolase low > 80
Escherichia coli ECRC99 0.71 KEDOAH_06125 hemF oxygen-dependent coproporphyrinogen oxidase 0.71 KEDOAH_04675 yeiG S-formylglutathione hydrolase
Escherichia coli ECRC101 0.71 MCAODC_12625 hemF oxygen-dependent coproporphyrinogen oxidase 0.71 MCAODC_14560 yeiG S-formylglutathione hydrolase low > 87
Shewanella oneidensis MR-1 0.71 SO0038 hemF coproporphyrinogen III oxidase, aerobic (NCBI ptt file) 0.62 SOA0160 esterase, putative (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.71 Shewana3_0041 coproporphyrinogen III oxidase (RefSeq) 0.61 Shewana3_1838 putative esterase (RefSeq) low > 73
Klebsiella michiganensis M5al 0.70 BWI76_RS20740 coproporphyrinogen III oxidase 0.70 BWI76_RS19670 S-formylglutathione hydrolase low > 92
Shewanella amazonensis SB2B 0.69 Sama_0050 coproporphyrinogen III oxidase (RefSeq) 0.61 Sama_0003 carboxylesterase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.69 MIT1002_00026 Coproporphyrinogen-III oxidase, aerobic 0.59 MIT1002_03419 S-formylglutathione hydrolase YeiG
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_1907 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.60 Pf1N1B4_3109 S-formylglutathione hydrolase (EC 3.1.2.12)
Pseudomonas stutzeri RCH2 0.67 Psest_0028 Coproporphyrinogen III oxidase 0.60 Psest_2815 S-formylglutathione hydrolase low > 67
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_645 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.60 PfGW456L13_4681 S-formylglutathione hydrolase (EC 3.1.2.12)
Pseudomonas putida KT2440 0.66 PP_0073 Coproporphyrinogen-III oxidase, aerobic 0.56 PP_1617 S-formylglutathione hydrolase / S-lactoylglutathione hydrolase
Pseudomonas sp. RS175 0.66 PFR28_04656 Oxygen-dependent coproporphyrinogen-III oxidase 0.60 PFR28_00421 S-formylglutathione hydrolase YeiG
Pseudomonas fluorescens FW300-N2E3 0.66 AO353_10665 coproporphyrinogen III oxidase 0.59 AO353_16585 S-formylglutathione hydrolase
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_0024 coproporphyrinogen oxidase 0.59 Psyr_1368 Carboxylesterase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_0024 coproporphyrinogen oxidase 0.59 Psyr_1368 Carboxylesterase
Pseudomonas fluorescens FW300-N2C3 0.66 AO356_11310 coproporphyrinogen III oxidase 0.59 AO356_05915 S-formylglutathione hydrolase
Pseudomonas fluorescens FW300-N2E2 0.66 Pf6N2E2_4129 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.59 Pf6N2E2_3043 S-formylglutathione hydrolase (EC 3.1.2.12)
Pseudomonas sp. S08-1 0.66 OH686_12490 Coproporphyrinogen III oxidase, aerobic 0.60 OH686_18155 S-formylglutathione hydrolase
Dyella japonica UNC79MFTsu3.2 0.65 ABZR86_RS13525 oxygen-dependent coproporphyrinogen oxidase 0.54 ABZR86_RS08985 S-formylglutathione hydrolase
Rhodanobacter denitrificans MT42 0.65 LRK55_RS09455 oxygen-dependent coproporphyrinogen oxidase 0.52 LRK55_RS02400 S-formylglutathione hydrolase low > 63
Pseudomonas fluorescens SBW25-INTG 0.65 PFLU_RS00115 oxygen-dependent coproporphyrinogen oxidase 0.60 PFLU_RS06400 S-formylglutathione hydrolase
Pseudomonas fluorescens SBW25 0.65 PFLU_RS00115 oxygen-dependent coproporphyrinogen oxidase 0.60 PFLU_RS06400 S-formylglutathione hydrolase
Rhodanobacter sp. FW510-T8 0.65 OKGIIK_16050 hemF oxygen-dependent coproporphyrinogen oxidase 0.53 OKGIIK_09695 fghA S-formylglutathione hydrolase
Rhodanobacter denitrificans FW104-10B01 0.64 LRK54_RS09795 oxygen-dependent coproporphyrinogen oxidase 0.52 LRK54_RS02645 S-formylglutathione hydrolase
Pseudomonas simiae WCS417 0.64 PS417_00120 coproporphyrinogen III oxidase 0.60 PS417_06335 S-formylglutathione hydrolase
Kangiella aquimarina DSM 16071 0.64 B158DRAFT_0404 coproporphyrinogen oxidase (EC 1.3.3.3) 0.67 B158DRAFT_0941 S-formylglutathione hydrolase
Ralstonia solanacearum PSI07 0.62 RPSI07_RS13675 oxygen-dependent coproporphyrinogen oxidase 0.48 RPSI07_RS20970 S-formylglutathione hydrolase
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS17765 coproporphyrinogen III oxidase 0.49 HSERO_RS13610 S-formylglutathione hydrolase
Burkholderia phytofirmans PsJN 0.62 BPHYT_RS06400 oxygen-dependent coproporphyrinogen-III oxidase 0.59 BPHYT_RS00495 S-formylglutathione hydrolase low > 109
Paraburkholderia sabiae LMG 24235 0.62 QEN71_RS24405 oxygen-dependent coproporphyrinogen oxidase 0.50 QEN71_RS02560 S-formylglutathione hydrolase
Paraburkholderia graminis OAS925 0.62 ABIE53_001544 coproporphyrinogen III oxidase 0.51 ABIE53_003401 S-formylglutathione hydrolase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.62 H281DRAFT_04520 coproporphyrinogen oxidase 0.51 H281DRAFT_04165 S-formylglutathione hydrolase
Xanthomonas campestris pv. campestris strain 8004 0.62 Xcc-8004.5101.1 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.60 Xcc-8004.984.1 S-formylglutathione hydrolase (EC 3.1.2.12)
Ralstonia solanacearum IBSBF1503 0.62 RALBFv3_RS03550 coproporphyrinogen III oxidase 0.48 RALBFv3_RS12340 S-formylglutathione hydrolase
Ralstonia solanacearum UW163 0.62 UW163_RS10120 coproporphyrinogen III oxidase 0.48 UW163_RS01265 S-formylglutathione hydrolase
Ralstonia solanacearum GMI1000 0.62 RS_RS11000 coproporphyrinogen III oxidase 0.47 RS_RS03025 S-formylglutathione hydrolase
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS15415 oxygen-dependent coproporphyrinogen oxidase 0.47 ABZR87_RS08280 S-formylglutathione hydrolase
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS04725 coproporphyrinogen III oxidase 0.48 RR42_RS28645 S-formylglutathione hydrolase
Lysobacter sp. OAE881 0.61 ABIE51_RS02020 oxygen-dependent coproporphyrinogen oxidase 0.60 ABIE51_RS18920 S-formylglutathione hydrolase
Variovorax sp. OAS795 0.59 ABID97_RS16730 oxygen-dependent coproporphyrinogen oxidase 0.47 ABID97_RS10225 S-formylglutathione hydrolase
Variovorax sp. SCN45 0.59 GFF301 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.47 GFF2943 S-formylglutathione hydrolase (EC 3.1.2.12)
Acidovorax sp. GW101-3H11 0.59 Ac3H11_2420 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.49 Ac3H11_3164 S-formylglutathione hydrolase (EC 3.1.2.12)
Acinetobacter radioresistens SK82 0.58 MPMX26_02746 Oxygen-dependent coproporphyrinogen-III oxidase 0.62 MPMX26_00882 S-formylglutathione hydrolase FrmB
Hydrogenophaga sp. GW460-11-11-14-LB1 0.58 GFF4526 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 0.52 GFF3319 S-formylglutathione hydrolase (EC 3.1.2.12)
Castellaniella sp019104865 MT123 0.58 ABCV34_RS02545 oxygen-dependent coproporphyrinogen oxidase 0.58 ABCV34_RS09040 S-formylglutathione hydrolase low > 48
Synechococcus elongatus PCC 7942 0.50 Synpcc7942_0674 hemF coproporphyrinogen III oxidase 0.61 Synpcc7942_0458 fghA Carboxylesterase
Azospirillum sp. SherDot2 0.34 MPMX19_05010 Oxygen-dependent coproporphyrinogen-III oxidase 0.56 MPMX19_05325 S-formylglutathione hydrolase YeiG
Phaeobacter inhibens DSM 17395 0.33 PGA1_c29970 coproporphyrinogen 3 oxidase, aerobic 0.54 PGA1_c31600 S-formylglutathione hydrolase FghA
Bosea sp. OAE506 0.33 ABIE41_RS11175 oxygen-dependent coproporphyrinogen oxidase 0.46 ABIE41_RS09630 S-formylglutathione hydrolase
Caulobacter crescentus NA1000 Δfur 0.32 CCNA_00540 coproporphyrinogen III oxidase 0.50 CCNA_02600 S-formylglutathione hydrolase
Caulobacter crescentus NA1000 0.32 CCNA_00540 coproporphyrinogen III oxidase 0.50 CCNA_02600 S-formylglutathione hydrolase
Sinorhizobium meliloti 1021 0.31 SMc00180 coproporphyrinogen III oxidase 0.56 SM_b20171 carboxylesterase
Agrobacterium fabrum C58 0.30 Atu2247 coproporphyrinogen III oxidase 0.50 Atu1476 esterase D
Rhizobium sp. OAE497 0.30 ABIE40_RS13225 oxygen-dependent coproporphyrinogen oxidase 0.49 ABIE40_RS09880 S-formylglutathione hydrolase
Sphingomonas koreensis DSMZ 15582 0.29 Ga0059261_3217 coproporphyrinogen oxidase (EC 1.3.3.3) 0.51 Ga0059261_1822 S-formylglutathione hydrolase

Not shown: 7 genomes with orthologs for HER17_RS17265 only; 5 genomes with orthologs for HER17_RS12795 only