Conservation of cofitness between HER17_RS06930 and HER17_RS05560 in Pectobacterium carotovorum WPP14

73 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS06930 50S ribosomal protein L3 N(5)-glutamine methyltransferase 1.0 HER17_RS05560 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.89 11
Dickeya dadantii 3937 0.90 DDA3937_RS14585 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.81 DDA3937_RS15955 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 74
Dickeya dianthicola 67-19 0.90 HGI48_RS14535 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.81 HGI48_RS16070 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 71
Dickeya dianthicola ME23 0.90 DZA65_RS15470 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.81 DZA65_RS17155 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 75
Serratia liquefaciens MT49 0.86 IAI46_18030 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.79 IAI46_21240 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 86
Enterobacter asburiae PDN3 0.85 EX28DRAFT_0274 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 0.77 EX28DRAFT_3730 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 76
Enterobacter sp. TBS_079 0.85 MPMX20_03265 50S ribosomal protein L3 glutamine methyltransferase 0.78 MPMX20_00827 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 85
Rahnella sp. WP5 0.84 EX31_RS19690 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.80 EX31_RS03280 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 89
Klebsiella michiganensis M5al 0.84 BWI76_RS20440 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.77 BWI76_RS04995 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.83 GFF1951 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p 0.77 GFF91 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 78
Escherichia fergusonii Becca 0.82 EFB2_01528 50S ribosomal protein L3 glutamine methyltransferase 0.77 EFB2_03910 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 86
Escherichia coli BW25113 0.82 b2330 yfcB putative adenine-specific methylase (VIMSS) 0.78 b0134 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.82 OHPLBJKB_01375 50S ribosomal protein L3 glutamine methyltransferase 0.78 OHPLBJKB_03527 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 73
Escherichia coli ECRC100 0.82 OKFHMN_22610 prmB 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.78 OKFHMN_10400 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 80
Escherichia coli Nissle 1917 0.82 ECOLIN_RS13495 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.77 ECOLIN_RS00745 3-methyl-2-oxobutanoate hydroxymethyltransferase
Escherichia coli ECRC101 0.82 MCAODC_13650 prmB 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.78 MCAODC_00915 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 87
Escherichia coli ECRC102 0.82 NIAGMN_20385 prmB 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.78 NIAGMN_08250 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase
Escherichia coli ECRC98 0.82 JDDGAC_26570 prmB 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.78 JDDGAC_13995 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 86
Escherichia coli ECRC99 0.82 KEDOAH_05585 prmB 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.77 KEDOAH_17755 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase
Escherichia coli BL21 0.82 ECD_02255 N5-glutamine methyltransferase 0.78 ECD_00133 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 61
Escherichia coli ECOR38 0.82 HEPCGN_21815 prmB 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.78 HEPCGN_08375 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 87
Erwinia tracheiphila SCR3 0.82 LU632_RS07770 prmB 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.76 LU632_RS20100 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 74
Escherichia coli ECRC62 0.82 BNILDI_13165 prmB 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.78 BNILDI_08925 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 75
Pantoea sp. MT58 0.82 IAI47_06145 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.72 IAI47_15655 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 76
Escherichia coli ECOR27 0.81 NOLOHH_14245 prmB 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.78 NOLOHH_02745 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 75
Vibrio cholerae E7946 ATCC 55056 0.77 CSW01_10570 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.67 CSW01_03135 3-methyl-2-oxobutanoate hydroxymethyltransferase
Shewanella loihica PV-4 0.64 Shew_2417 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (RefSeq) 0.64 Shew_3133 3-methyl-2-oxobutanoate hydroxymethyltransferase (RefSeq)
Shewanella amazonensis SB2B 0.63 Sama_2160 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (RefSeq) 0.63 Sama_0776 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase (RefSeq)
Shewanella sp. ANA-3 0.63 Shewana3_1468 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase (RefSeq) 0.62 Shewana3_3408 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.60 SO3080 hemK family protein (NCBI ptt file) 0.63 SO0870 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.58 MIT1002_01228 50S ribosomal protein L3 glutamine methyltransferase 0.64 MIT1002_03694 3-methyl-2-oxobutanoate hydroxymethyltransferase
Pseudomonas sp. S08-1 0.56 OH686_00665 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 0.56 OH686_17245 3-methyl-2-oxobutanoate hydroxymethyltransferase
Pseudomonas stutzeri RCH2 0.55 Psest_1995 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 0.52 Psest_0996 3-methyl-2-oxobutanoate hydroxymethyltransferase
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_5819 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p 0.56 Pf6N2E2_5153 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 103
Pseudomonas sp. RS175 0.54 PFR28_03129 50S ribosomal protein L3 glutamine methyltransferase 0.57 PFR28_03721 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 88
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_19525 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 0.56 AO356_16060 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 104
Pseudomonas fluorescens FW300-N2E3 0.53 AO353_02265 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 0.56 AO353_14385 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 101
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_3777 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p 0.55 Pf1N1B4_2854 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.53 Psyr_1850 [LSU ribosomal protein L3P]-glutamine N5-methyltransferase 0.55 Psyr_0828 ketopantoate hydroxymethyltransferase low > 86
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS21295 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.54 PFLU_RS25750 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 109
Pseudomonas syringae pv. syringae B728a 0.53 Psyr_1850 [LSU ribosomal protein L3P]-glutamine N5-methyltransferase 0.55 Psyr_0828 ketopantoate hydroxymethyltransferase
Pseudomonas fluorescens SBW25 0.53 PFLU_RS21295 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.54 PFLU_RS25750 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 109
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_4168 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p 0.55 PfGW456L13_1521 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 87
Marinobacter adhaerens HP15 0.53 HP15_1839 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 0.56 HP15_324 3-methyl-2-oxobutanoate hydroxymethyltransferase
Pseudomonas simiae WCS417 0.53 PS417_19330 SAM-dependent methyltransferase 0.55 PS417_23910 3-methyl-2-oxobutanoate hydroxymethyltransferase
Pseudomonas putida KT2440 0.53 PP_1827 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 0.56 PP_4699 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 96
Kangiella aquimarina DSM 16071 0.49 B158DRAFT_1297 [LSU ribosomal protein L3P]-glutamine N5-methyltransferase (EC 2.1.1.-) 0.57 B158DRAFT_0061 ketopantoate hydroxymethyltransferase (EC 2.1.2.11)
Acinetobacter radioresistens SK82 0.46 MPMX26_01339 50S ribosomal protein L3 glutamine methyltransferase 0.50 MPMX26_00545 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.71 15
Xanthomonas campestris pv. campestris strain 8004 0.45 Xcc-8004.1953.1 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p 0.49 Xcc-8004.3052.1 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS08050 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.44 ABZR86_RS00815 3-methyl-2-oxobutanoate hydroxymethyltransferase
Castellaniella sp019104865 MT123 0.45 ABCV34_RS05175 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.35 ABCV34_RS13815 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 48
Rhodanobacter denitrificans MT42 0.44 LRK55_RS01515 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.47 LRK55_RS14830 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 63
Azospirillum brasilense Sp245 0.44 AZOBR_RS10950 SAM-dependent methyltransferase 0.36 AZOBR_RS06445 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 97
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS01735 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.47 LRK54_RS15115 3-methyl-2-oxobutanoate hydroxymethyltransferase
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_04795 prmB 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.46 OKGIIK_03885 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 52
Azospirillum sp. SherDot2 0.43 MPMX19_00751 50S ribosomal protein L3 glutamine methyltransferase 0.36 MPMX19_01580 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 112
Dechlorosoma suillum PS 0.43 Dsui_2712 protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 0.46 Dsui_1471 3-methyl-2-oxobutanoate hydroxymethyltransferase
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS06350 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.51 QEN71_RS26480 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 153
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS10785 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 0.52 HSERO_RS03085 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 78
Paraburkholderia graminis OAS925 0.42 ABIE53_002520 ribosomal protein L3 glutamine methyltransferase 0.51 ABIE53_000867 3-methyl-2-oxobutanoate hydroxymethyltransferase
Lysobacter sp. OAE881 0.42 ABIE51_RS08215 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.48 ABIE51_RS08025 3-methyl-2-oxobutanoate hydroxymethyltransferase
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS00290 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.52 RALBFv3_RS05315 3-methyl-2-oxobutanoate hydroxymethyltransferase
Ralstonia solanacearum UW163 0.42 UW163_RS13620 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.52 UW163_RS08310 3-methyl-2-oxobutanoate hydroxymethyltransferase
Ralstonia solanacearum GMI1000 0.41 RS_RS06960 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.53 RS_RS13180 3-methyl-2-oxobutanoate hydroxymethyltransferase
Ralstonia solanacearum PSI07 0.41 RPSI07_RS17185 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.52 RPSI07_RS11985 3-methyl-2-oxobutanoate hydroxymethyltransferase
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS11740 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.51 ABZR87_RS00950 3-methyl-2-oxobutanoate hydroxymethyltransferase
Rhodopseudomonas palustris CGA009 0.40 TX73_005990 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.34 TX73_016025 3-methyl-2-oxobutanoate hydroxymethyltransferase
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS12205 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 0.49 BPHYT_RS03605 3-methyl-2-oxobutanoate hydroxymethyltransferase
Paraburkholderia bryophila 376MFSha3.1 0.39 H281DRAFT_00596 [LSU ribosomal protein L3P]-glutamine N5-methyltransferase 0.52 H281DRAFT_04703 ketopantoate hydroxymethyltransferase
Cupriavidus basilensis FW507-4G11 0.38 RR42_RS11955 SAM-dependent methyltransferase 0.45 RR42_RS17250 3-methyl-2-oxobutanoate hydroxymethyltransferase
Variovorax sp. SCN45 0.36 GFF258 Ribosomal protein L3 N(5)-glutamine methyltransferase (EC 2.1.1.298) 0.37 GFF2579 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 127
Variovorax sp. OAS795 0.35 ABID97_RS16650 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.36 ABID97_RS07435 3-methyl-2-oxobutanoate hydroxymethyltransferase low > 91
Acidovorax sp. GW101-3H11 0.34 Ac3H11_2299 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p 0.40 Ac3H11_3839 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF4549 Protein-N(5)-glutamine methyltransferase PrmB, methylates LSU ribosomal protein L3p 0.39 GFF1218 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)

Not shown: 0 genomes with orthologs for HER17_RS06930 only; 25 genomes with orthologs for HER17_RS05560 only