Conservation of cofitness between PS417_21480 and PS417_19880 in Pseudomonas simiae WCS417

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_21480 23S rRNA pseudouridylate synthase 1.0 PS417_19880 flagellar basal body L-ring protein 0.36 14
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.98 PFLU_RS21850 flagellar basal body L-ring protein FlgH 0.29 28
Pseudomonas fluorescens SBW25 0.99 PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.98 PFLU_RS21850 flagellar basal body L-ring protein FlgH low > 109
Pseudomonas fluorescens FW300-N2E3 0.94 AO353_01405 23S rRNA pseudouridylate synthase 0.89 AO353_18605 flagellar basal body L-ring protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_459 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) 0.87 Pf1N1B4_3570 Flagellar L-ring protein FlgH — —
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_5944 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) 0.89 Pf6N2E2_2626 Flagellar L-ring protein FlgH 0.42 10
Pseudomonas fluorescens FW300-N2C3 0.93 AO356_20125 23S rRNA pseudouridylate synthase 0.88 AO356_03920 flagellar basal body L-ring protein low > 104
Pseudomonas sp. RS175 0.92 PFR28_03018 Ribosomal large subunit pseudouridine synthase C 0.88 PFR28_00806 Flagellar L-ring protein low > 88
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_2097 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) 0.91 PfGW456L13_4385 Flagellar L-ring protein FlgH low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.89 Psyr_1639 ribosomal large subunit pseudouridine synthase C 0.78 Psyr_3474 Flagellar L-ring protein low > 86
Pseudomonas syringae pv. syringae B728a 0.89 Psyr_1639 ribosomal large subunit pseudouridine synthase C 0.78 Psyr_3474 Flagellar L-ring protein low > 86
Pseudomonas putida KT2440 0.86 PP_1906 ribosomal large subunit pseudouridine synthase C 0.88 PP_4384 Flagellar L-ring protein low > 96
Pseudomonas stutzeri RCH2 0.82 Psest_1680 pseudouridine synthase, RluA family 0.77 Psest_2962 Flagellar basal body L-ring protein — —
Pseudomonas sp. S08-1 0.81 OH686_22095 LSU rRNA pseudouridine(955/2504/2580) synthase 0.70 OH686_02945 Flagellar L-ring protein FlgH low > 80
Pantoea sp. MT58 0.56 IAI47_12105 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.24 IAI47_12135 flagellar basal body L-ring protein FlgH 0.55 13
Pectobacterium carotovorum WPP14 0.55 HER17_RS08615 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.25 HER17_RS08195 flagellar basal body L-ring protein FlgH low > 75
Rahnella sp. WP5 0.55 EX31_RS24400 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.23 EX31_RS11285 flagellar basal body L-ring protein FlgH low > 89
Erwinia tracheiphila SCR3 0.54 LU632_RS14855 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.27 LU632_RS10425 flgH flagellar basal body L-ring protein FlgH low > 74
Escherichia fergusonii Becca 0.54 EFB2_02889 Ribosomal large subunit pseudouridine synthase C 0.25 EFB2_02895 Flagellar L-ring protein low > 86
Escherichia coli ECOR27 0.54 NOLOHH_21145 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.25 NOLOHH_21175 flgH flagellar basal body L-ring protein FlgH — —
Escherichia coli Nissle 1917 0.54 ECOLIN_RS06280 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.25 ECOLIN_RS06245 flagellar basal body L-ring protein FlgH — —
Escherichia coli BL21 0.54 ECD_01082 23S rRNA pseudouridine(955,2504,2580) synthase 0.25 ECD_01075 flagellar protein of basal-body outer-membrane L ring low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_02580 Ribosomal large subunit pseudouridine synthase C 0.25 OHPLBJKB_02586 Flagellar L-ring protein low > 73
Escherichia coli ECRC62 0.54 BNILDI_19305 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.25 BNILDI_19335 flgH flagellar basal body L-ring protein FlgH — —
Escherichia coli BW25113 0.54 b1086 rluC 23S rRNA pseudouridylate synthase (NCBI) 0.25 b1079 flgH flagellar L-ring protein precursor H (NCBI) low > 76
Escherichia coli ECRC99 0.54 KEDOAH_24140 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.25 KEDOAH_24110 flgH flagellar basal body L-ring protein FlgH — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF3366 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) 0.25 GFF3360 Flagellar L-ring protein FlgH low > 78
Escherichia coli ECRC101 0.54 OKFHMN_03615 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.25 OKFHMN_03645 flgH flagellar basal body L-ring protein FlgH — —
Escherichia coli ECRC101 0.54 MCAODC_22975 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.25 MCAODC_23005 flgH flagellar basal body L-ring protein FlgH — —
Escherichia coli ECRC102 0.54 NIAGMN_24215 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.25 NIAGMN_24185 flgH flagellar basal body L-ring protein FlgH — —
Escherichia coli ECRC98 0.54 JDDGAC_07275 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.25 JDDGAC_07305 flgH flagellar basal body L-ring protein FlgH — —
Enterobacter asburiae PDN3 0.54 EX28DRAFT_1844 pseudouridine synthase, RluA family 0.26 EX28DRAFT_1853 Flagellar basal body L-ring protein low > 76
Enterobacter sp. TBS_079 0.54 MPMX20_01766 Ribosomal large subunit pseudouridine synthase C 0.26 MPMX20_01758 Flagellar L-ring protein low > 85
Alteromonas macleodii MIT1002 0.54 MIT1002_01725 Ribosomal large subunit pseudouridine synthase C 0.42 MIT1002_01047 Basal body L-ring protein low > 70
Shewanella amazonensis SB2B 0.53 Sama_1988 pseudouridylate synthase (RefSeq) 0.44 Sama_2312 flgH flagellar basal body L-ring protein (RefSeq) low > 62
Dickeya dadantii 3937 0.53 DDA3937_RS13155 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.26 DDA3937_RS13450 flagellar basal body L-ring protein FlgH low > 74
Serratia liquefaciens MT49 0.53 IAI46_09755 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.24 IAI46_15930 flagellar basal body L-ring protein FlgH low > 86
Dickeya dianthicola ME23 0.53 DZA65_RS13690 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.26 DZA65_RS13980 flagellar basal body L-ring protein FlgH low > 75
Dickeya dianthicola 67-19 0.53 HGI48_RS13220 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.26 HGI48_RS13495 flagellar basal body L-ring protein FlgH low > 71
Shewanella loihica PV-4 0.52 Shew_1594 RluA family pseudouridine synthase (RefSeq) 0.41 Shew_1351 flgH flagellar basal body L-ring protein (RefSeq) — —
Shewanella sp. ANA-3 0.52 Shewana3_2566 ribosomal large subunit pseudouridine synthase C (RefSeq) 0.40 Shewana3_1327 flgH flagellar basal body L-ring protein (RefSeq) low > 73
Marinobacter adhaerens HP15 0.49 HP15_2221 pseudouridine synthase, RluA family 0.39 HP15_1473 flagellar basal body L-ring protein low > 73
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS09415 ribosomal large subunit pseudouridine synthase C 0.22 HSERO_RS10210 flagellar L-ring protein FlgH low > 78
Paraburkholderia graminis OAS925 0.45 ABIE53_003058 23S rRNA pseudouridine955/2504/2580 synthase 0.24 ABIE53_000095 flagellar L-ring protein precursor FlgH 0.33 112
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS04500 RluA family pseudouridine synthase 0.25 QEN71_RS28890 flagellar basal body L-ring protein FlgH 0.77 126
Paraburkholderia bryophila 376MFSha3.1 0.44 H281DRAFT_04340 23S rRNA pseudouridine955/2504/2580 synthase 0.27 H281DRAFT_05768 flagellar L-ring protein precursor FlgH low > 103
Dechlorosoma suillum PS 0.44 Dsui_2437 pseudouridine synthase, RluA family 0.28 Dsui_1738 flagellar basal body L-ring protein low > 51
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS14480 ribosomal large subunit pseudouridine synthase C 0.25 BPHYT_RS18865 flagellar L-ring protein FlgH low > 109
Lysobacter sp. OAE881 0.43 ABIE51_RS11800 RluA family pseudouridine synthase 0.30 ABIE51_RS16700 flagellar basal body L-ring protein FlgH low > 62
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.2616.1 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) 0.36 Xcc-8004.2785.1 Flagellar L-ring protein FlgH low > 74
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS10090 RluA family pseudouridine synthase 0.28 ABZR87_RS22260 flagellar basal body L-ring protein FlgH low > 80
Ralstonia solanacearum GMI1000 0.42 RS_RS05155 RluA family pseudouridine synthase 0.29 RS_RS18825 flagellar L-ring protein FlgH low > 80
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS14155 pseudouridine synthase 0.28 RR42_RS35695 flagellar L-ring protein FlgH low > 128
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS14375 RluA family pseudouridine synthase 0.29 RALBFv3_RS21710 flagellar L-ring protein FlgH low > 76
Ralstonia solanacearum UW163 0.42 UW163_RS11840 RluA family pseudouridine synthase 0.29 UW163_RS17475 flagellar L-ring protein FlgH — —
Ralstonia solanacearum PSI07 0.42 RPSI07_RS19085 RluA family pseudouridine synthase 0.28 RPSI07_RS01420 flagellar L-ring protein FlgH low > 81
Rhodanobacter denitrificans FW104-10B01 0.42 LRK54_RS17895 RluA family pseudouridine synthase 0.34 LRK54_RS13435 flagellar basal body L-ring protein FlgH low > 59
Rhodanobacter denitrificans MT42 0.42 LRK55_RS17750 RluA family pseudouridine synthase 0.34 LRK55_RS13175 flagellar basal body L-ring protein FlgH low > 63
Rhodanobacter sp. FW510-T8 0.41 OKGIIK_07405 rluA 23S rRNA pseudouridine(955/2504/2580) synthase 0.36 OKGIIK_02680 flgH flagellar basal body L-ring protein FlgH low > 52
Acidovorax sp. GW101-3H11 0.40 Ac3H11_1590 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) 0.22 Ac3H11_1371 Flagellar L-ring protein FlgH — —
Variovorax sp. SCN45 0.40 GFF3847 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) 0.28 GFF5721 Flagellar L-ring protein FlgH low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF121 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) 0.33 GFF4078 Flagellar L-ring protein FlgH — —
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS02725 RluA family pseudouridine synthase 0.43 ABZR86_RS20105 flagellar basal body L-ring protein FlgH low > 74
Castellaniella sp019104865 MT123 0.39 ABCV34_RS08415 RluA family pseudouridine synthase 0.25 ABCV34_RS05740 flagellar basal body L-ring protein FlgH low > 48
Rhizobium sp. OAE497 0.28 ABIE40_RS09915 RluA family pseudouridine synthase 0.17 ABIE40_RS03005 flagellar basal body L-ring protein FlgH low > 107
Rhodospirillum rubrum S1H 0.27 Rru_A2659 Pseudouridine synthase, RluD (NCBI) 0.18 Rru_A2845 Flagellar L-ring protein (NCBI) — —
Sphingomonas koreensis DSMZ 15582 0.23 Ga0059261_1033 pseudouridine synthase, RluA family 0.32 Ga0059261_2095 Flagellar basal body L-ring protein — —
Brevundimonas sp. GW460-12-10-14-LB2 0.23 A4249_RS07865 RluA family pseudouridine synthase 0.20 A4249_RS09635 flagellar basal body L-ring protein FlgH low > 48
Azospirillum brasilense Sp245 0.22 AZOBR_RS06905 pseudouridine synthase 0.20 AZOBR_RS11230 flagellar L-ring protein FlgH low > 97
Caulobacter crescentus NA1000 0.22 CCNA_02059 ribosomal large subunit pseudouridine synthase C 0.19 CCNA_02145 flagellar L-ring protein flgH low > 66
Caulobacter crescentus NA1000 Δfur 0.22 CCNA_02059 ribosomal large subunit pseudouridine synthase C 0.19 CCNA_02145 flagellar L-ring protein flgH low > 67
Desulfovibrio vulgaris Hildenborough JW710 0.20 DVU3191 rluC ribosomal large subunit pseudouridine synthase C (TIGR) 0.25 DVU0515 flgH flagellar L-ring protein FlgH (TIGR) low > 55

Not shown: 13 genomes with orthologs for PS417_21480 only; 4 genomes with orthologs for PS417_19880 only