| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas simiae WCS417 | 1.0 | PS417_07140 | | peptidase M48 | 1.0 | PS417_17215 | | peptidylprolyl isomerase | 0.29 | 20 |
| Pseudomonas fluorescens SBW25 | 0.99 | PFLU_RS07250 | | M48 family metallopeptidase | 0.98 | PFLU_RS19150 | | peptidyl-prolyl cis-trans isomerase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.99 | PFLU_RS07250 | | M48 family metallopeptidase | 0.98 | PFLU_RS19150 | | peptidyl-prolyl cis-trans isomerase | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.84 | AO356_04555 | | peptidase M48 | 0.89 | AO356_01725 | | peptidylprolyl isomerase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.83 | Pf6N2E2_2752 | | Exported zinc metalloprotease YfgC precursor | 0.89 | Pf6N2E2_2214 | | Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.83 | Pf1N1B4_3327 | | Exported zinc metalloprotease YfgC precursor | 0.88 | Pf1N1B4_3949 | | Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.83 | Psyr_1543 | | Peptidase M48, Ste24p | 0.78 | Psyr_1751 | | PpiC-type peptidyl-prolyl cis-trans isomerase | 0.47 | 34 |
| Pseudomonas syringae pv. syringae B728a | 0.83 | Psyr_1543 | | Peptidase M48, Ste24p | 0.78 | Psyr_1751 | | PpiC-type peptidyl-prolyl cis-trans isomerase | low | > 86 |
| Pseudomonas fluorescens GW456-L13 | 0.83 | PfGW456L13_4512 | | Exported zinc metalloprotease YfgC precursor | 0.89 | PfGW456L13_2556 | | Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) | low | > 87 |
| Pseudomonas sp. RS175 | 0.83 | PFR28_00694 | | Beta-barrel assembly-enhancing protease | 0.88 | PFR28_01231 | | Peptidyl-prolyl cis-trans isomerase D | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.82 | AO353_17645 | | peptidase M48 | 0.87 | AO353_20200 | | peptidylprolyl isomerase | 0.45 | 13 |
| Pseudomonas putida KT2440 | 0.80 | PP_1232 | | conserved exported protein of unknown function | 0.76 | PP_2304 | | putative Peptidyl-prolyl cis-trans isomerase D | 0.24 | 84 |
| Pseudomonas sp. S08-1 | 0.71 | OH686_19195 | | Exported zinc metalloprotease YfgC precursor | 0.66 | OH686_03625 | | Peptidyl-prolyl cis-trans isomerase PpiD | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.69 | Psest_1510 | | Putative Zn-dependent protease, contains TPR repeats | 0.65 | Psest_2283 | | Parvulin-like peptidyl-prolyl isomerase | — | — |
| Marinobacter adhaerens HP15 | 0.27 | HP15_2031 | | putative Zn-dependent protease, contains TPR repeats | 0.31 | HP15_2181 | | PpiC-type peptidyl-prolyl cis-trans isomerase | 0.41 | 40 |
| Shewanella loihica PV-4 | 0.26 | Shew_1841 | | peptidase M48, Ste24p (RefSeq) | 0.25 | Shew_2504 | | PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq) | low | > 60 |
| Erwinia tracheiphila SCR3 | 0.25 | LU632_RS08305 | | M48 family metallopeptidase | 0.16 | LU632_RS18325 | ppiD | peptidylprolyl isomerase | low | > 74 |
| Alteromonas macleodii MIT1002 | 0.25 | MIT1002_02211 | | TPR repeat-containing protein YfgC precursor | 0.22 | MIT1002_02755 | | Peptidyl-prolyl cis-trans isomerase D | low | > 70 |
| Vibrio cholerae E7946 ATCC 55056 | 0.25 | CSW01_10785 | | hypothetical protein | 0.20 | CSW01_09595 | | peptidylprolyl isomerase | low | > 62 |
| Shewanella amazonensis SB2B | 0.25 | Sama_1913 | | peptidase M48, Ste24p (RefSeq) | 0.25 | Sama_1228 | | peptidyl-prolyl cis-trans isomerase D (RefSeq) | 0.64 | 2 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.25 | GFF2175 | | Exported zinc metalloprotease YfgC precursor | 0.17 | GFF4357 | | Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) | low | > 78 |
| Enterobacter asburiae PDN3 | 0.25 | EX28DRAFT_0178 | | Putative Zn-dependent protease, contains TPR repeats | 0.17 | EX28DRAFT_2529 | | Parvulin-like peptidyl-prolyl isomerase | low | > 76 |
| Dickeya dadantii 3937 | 0.24 | DDA3937_RS06050 | | M48 family metallopeptidase | 0.17 | DDA3937_RS05660 | | peptidylprolyl isomerase | low | > 74 |
| Enterobacter sp. TBS_079 | 0.24 | MPMX20_03344 | | Beta-barrel assembly-enhancing protease | 0.18 | MPMX20_01032 | | Peptidyl-prolyl cis-trans isomerase D | 0.31 | 51 |
| Pantoea sp. MT58 | 0.24 | IAI47_05205 | | M48 family metallopeptidase | 0.16 | IAI47_14635 | | peptidylprolyl isomerase | low | > 76 |
| Escherichia coli BW25113 | 0.24 | b2494 | yfgC | predicted peptidase (NCBI) | 0.19 | b0441 | ppiD | peptidyl-prolyl cis-trans isomerase (rotamase D) (NCBI) | low | > 76 |
| Escherichia coli ECRC62 | 0.24 | BNILDI_12295 | bepA | beta-barrel assembly-enhancing protease | 0.19 | BNILDI_22660 | ppiD | peptidylprolyl isomerase | low | > 75 |
| Escherichia coli ECRC102 | 0.24 | NIAGMN_19605 | bepA | beta-barrel assembly-enhancing protease | 0.19 | NIAGMN_06365 | ppiD | peptidylprolyl isomerase | — | — |
| Escherichia coli ECRC100 | 0.24 | OKFHMN_21835 | bepA | beta-barrel assembly-enhancing protease | 0.19 | OKFHMN_08310 | ppiD | peptidylprolyl isomerase | low | > 80 |
| Escherichia coli ECRC101 | 0.24 | MCAODC_12365 | bepA | beta-barrel assembly-enhancing protease | 0.19 | MCAODC_27535 | ppiD | peptidylprolyl isomerase | low | > 87 |
| Escherichia coli BL21 | 0.24 | ECD_02386 | | OM protein maintenance and assembly metalloprotease and chaperone, periplasmic | 0.19 | ECD_00393 | | periplasmic folding chaperone, has an inactive PPIase domain | — | — |
| Escherichia coli ECOR27 | 0.24 | NOLOHH_13485 | bepA | beta-barrel assembly-enhancing protease | 0.19 | NOLOHH_01245 | ppiD | peptidylprolyl isomerase | low | > 75 |
| Escherichia coli ECRC99 | 0.24 | KEDOAH_06385 | bepA | beta-barrel assembly-enhancing protease | 0.19 | KEDOAH_19655 | ppiD | peptidylprolyl isomerase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.24 | OHPLBJKB_01232 | | Beta-barrel assembly-enhancing protease | 0.19 | OHPLBJKB_03232 | | Peptidyl-prolyl cis-trans isomerase D | low | > 73 |
| Escherichia coli ECRC98 | 0.24 | JDDGAC_25780 | bepA | beta-barrel assembly-enhancing protease | 0.19 | JDDGAC_11965 | ppiD | peptidylprolyl isomerase | low | > 86 |
| Rahnella sp. WP5 | 0.24 | EX31_RS22720 | | M48 family metallopeptidase | 0.17 | EX31_RS22265 | | peptidylprolyl isomerase | low | > 89 |
| Escherichia fergusonii Becca | 0.24 | EFB2_01404 | | Beta-barrel assembly-enhancing protease | 0.19 | EFB2_03616 | | Peptidyl-prolyl cis-trans isomerase D | low | > 86 |
| Escherichia coli Nissle 1917 | 0.24 | ECOLIN_RS14165 | | beta-barrel assembly-enhancing protease | 0.19 | ECOLIN_RS02645 | | peptidylprolyl isomerase | 0.67 | 4 |
| Escherichia coli ECOR38 | 0.23 | HEPCGN_21000 | bepA | beta-barrel assembly-enhancing protease | 0.19 | HEPCGN_06925 | ppiD | peptidylprolyl isomerase | low | > 87 |
| Shewanella oneidensis MR-1 | 0.23 | SO2869 | | conserved hypothetical protein (NCBI ptt file) | 0.26 | SO1798 | ppiD | peptidyl-prolyl cis-trans isomerase D (NCBI ptt file) | 0.43 | 19 |
| Herbaspirillum seropedicae SmR1 | 0.23 | HSERO_RS03305 | | peptidase M48 | 0.16 | HSERO_RS11155 | | peptidyl-prolyl cis-trans isomerase | low | > 78 |
| Shewanella sp. ANA-3 | 0.23 | Shewana3_1649 | | peptidase M48, Ste24p (RefSeq) | 0.26 | Shewana3_2657 | | PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq) | low | > 73 |
| Klebsiella michiganensis M5al | 0.23 | BWI76_RS20925 | | peptidase M48 | 0.19 | BWI76_RS06545 | | peptidylprolyl isomerase | low | > 92 |
| Dickeya dianthicola ME23 | 0.23 | DZA65_RS06445 | | M48 family metallopeptidase | 0.17 | DZA65_RS06030 | | peptidylprolyl isomerase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.23 | HGI48_RS06095 | | M48 family metallopeptidase | 0.17 | HGI48_RS05705 | | peptidylprolyl isomerase | low | > 71 |
| Dechlorosoma suillum PS | 0.23 | Dsui_0003 | | putative Zn-dependent protease | 0.22 | Dsui_2202 | | parvulin-like peptidyl-prolyl isomerase | low | > 51 |
| Kangiella aquimarina DSM 16071 | 0.23 | B158DRAFT_2440 | | Putative Zn-dependent protease, contains TPR repeats | 0.16 | B158DRAFT_1042 | | Parvulin-like peptidyl-prolyl isomerase | 0.74 | 1 |
| Serratia liquefaciens MT49 | 0.23 | IAI46_18840 | | M48 family metallopeptidase | 0.16 | IAI46_05030 | | peptidylprolyl isomerase | low | > 86 |
| Pectobacterium carotovorum WPP14 | 0.22 | HER17_RS15440 | | M48 family metallopeptidase | 0.17 | HER17_RS15830 | | peptidylprolyl isomerase | low | > 75 |
| Burkholderia phytofirmans PsJN | 0.22 | BPHYT_RS16315 | | peptidase M48 Ste24p | 0.15 | BPHYT_RS09480 | | peptidyl-prolyl cis-trans isomerase | low | > 109 |
| Ralstonia sp. UNC404CL21Col | 0.21 | ABZR87_RS08020 | | M48 family metalloprotease | 0.17 | ABZR87_RS12765 | | SurA N-terminal domain-containing protein | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.21 | RALBFv3_RS12125 | | peptidase M48 | 0.18 | RALBFv3_RS01320 | | peptidylprolyl isomerase | low | > 76 |
| Ralstonia solanacearum UW163 | 0.21 | UW163_RS01485 | | peptidase M48 | 0.18 | UW163_RS14630 | | peptidylprolyl isomerase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.21 | QEN71_RS02380 | | M48 family metalloprotease | 0.17 | QEN71_RS21955 | | SurA N-terminal domain-containing protein | low | > 153 |
| Ralstonia solanacearum GMI1000 | 0.21 | RS_RS02810 | | peptidase M48 | 0.18 | RS_RS08675 | | peptidyl-prolyl cis-trans isomerase | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.21 | RPSI07_RS21205 | | peptidase M48 | 0.17 | RPSI07_RS16155 | | peptidylprolyl isomerase | low | > 81 |
| Lysobacter sp. OAE881 | 0.20 | ABIE51_RS14215 | | M48 family metalloprotease | 0.20 | ABIE51_RS14120 | | peptidyl-prolyl cis-trans isomerase | low | > 62 |
| Rhodanobacter denitrificans MT42 | 0.20 | LRK55_RS14750 | | M48 family metalloprotease | 0.21 | LRK55_RS16480 | | SurA N-terminal domain-containing protein | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.20 | LRK54_RS15035 | | M48 family metalloprotease | 0.21 | LRK54_RS16755 | | SurA N-terminal domain-containing protein | 0.97 | 2 |
| Castellaniella sp019104865 MT123 | 0.19 | ABCV34_RS07945 | | M48 family metalloprotease | 0.14 | ABCV34_RS03085 | | SurA N-terminal domain-containing protein | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.19 | ABZR86_RS00725 | | M48 family metalloprotease | 0.22 | ABZR86_RS07300 | | SurA N-terminal domain-containing protein | low | > 74 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.18 | Xcc-8004.4060.1 | | Exported zinc metalloprotease YfgC precursor | 0.18 | Xcc-8004.4039.1 | | Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.18 | OKGIIK_03795 | | Putative beta-barrel assembly-enhancing protease | 0.22 | OKGIIK_08010 | | Peptidylprolyl isomerase | 0.81 | 20 |
| Acinetobacter radioresistens SK82 | 0.17 | MPMX26_01126 | | Beta-barrel assembly-enhancing protease | 0.14 | MPMX26_01332 | | Peptidyl-prolyl cis-trans isomerase D | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.14 | DVU1578 | | TPR domain protein (TIGR) | 0.12 | DVU1065 | | peptidyl-prolyl cis-trans isomerse domain protein (TIGR) | 0.31 | 26 |
| Desulfovibrio vulgaris Miyazaki F | 0.14 | DvMF_0483 | | peptidase M48 Ste24p (RefSeq) | 0.13 | DvMF_3022 | | PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq) | 0.68 | 8 |
| Acidovorax sp. GW101-3H11 | 0.13 | Ac3H11_1239 | | Peptidase M48, Ste24p precursor | 0.17 | Ac3H11_377 | | Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) | — | — |
| Variovorax sp. SCN45 | 0.11 | GFF5421 | | Peptidase M48, Ste24p precursor | 0.17 | GFF2852 | | Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) | low | > 127 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.11 | A4249_RS04080 | | M48 family metalloprotease | 0.05 | A4249_RS06150 | | peptidylprolyl isomerase | — | — |
| Azospirillum sp. SherDot2 | 0.11 | MPMX19_01973 | | Beta-barrel assembly-enhancing protease | 0.09 | MPMX19_00894 | | Peptidyl-prolyl cis-trans isomerase D | — | — |
| Azospirillum brasilense Sp245 | 0.10 | AZOBR_RS11870 | | peptidase | 0.09 | AZOBR_RS07495 | | peptidylprolyl isomerase | low | > 97 |
| Rhodopseudomonas palustris CGA009 | 0.09 | TX73_012645 | | M48 family metalloprotease | 0.10 | TX73_014975 | | SurA N-terminal domain-containing protein | low | > 86 |
| Dinoroseobacter shibae DFL-12 | 0.07 | Dshi_1167 | | peptidase M48 Ste24p (RefSeq) | 0.07 | Dshi_1795 | | putative peptidyl-prolyl cis-trans isomerse D (RefSeq) | — | — |