Conservation of cofitness between HP15_293 and HP15_3253 in Marinobacter adhaerens HP15

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Marinobacter adhaerens HP15 1.0 HP15_293 DNA polymerase I 1.0 HP15_3253 ferritin-like DNA-binding protein 0.43 7
Kangiella aquimarina DSM 16071 0.61 B158DRAFT_0499 DNA polymerase I (EC 2.7.7.7) 0.32 B158DRAFT_0476 DNA-binding ferritin-like protein (oxidative damage protectant) 0.48 39
Alteromonas macleodii MIT1002 0.58 MIT1002_00014 DNA polymerase I 0.32 MIT1002_00525 DNA protection during starvation protein 2 low > 70
Pseudomonas putida KT2440 0.58 PP_0123 DNA polymerase I, 5 0.31 PP_1210 DNA-binding stress protein low > 96
Shewanella amazonensis SB2B 0.58 Sama_0093 DNA-directed DNA polymerase (RefSeq) 0.30 Sama_2598 Dps family protein (RefSeq) low > 62
Pseudomonas stutzeri RCH2 0.58 Psest_4219 DNA polymerase I 0.31 Psest_1492 DNA-binding ferritin-like protein (oxidative damage protectant) 0.73 1
Dyella japonica UNC79MFTsu3.2 0.58 ABZR86_RS17015 DNA polymerase I 0.29 ABZR86_RS19715 Dps family protein 0.53 4
Pseudomonas sp. S08-1 0.57 OH686_12215 DNA polymerase I 0.29 OH686_19105 DNA protection during starvation protein low > 80
Rhodanobacter denitrificans MT42 0.57 LRK55_RS06585 DNA polymerase I 0.28 LRK55_RS12415 Dps family protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.57 LRK54_RS06840 DNA polymerase I 0.28 LRK54_RS12710 DNA starvation/stationary phase protection protein 0.87 1
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_4162 DNA polymerase I (EC 2.7.7.7) 0.31 Pf6N2E2_5529 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) low > 103
Shewanella sp. ANA-3 0.57 Shewana3_4109 DNA polymerase I (RefSeq) 0.31 Shewana3_0985 Ferritin, Dps family protein (RefSeq) — —
Shewanella oneidensis MR-1 0.56 SO4669 polA DNA polymerase I (NCBI ptt file) 0.31 SO1158 Dps family protein (NCBI ptt file) — —
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_11465 DNA polymerase I 0.31 AO356_17990 ferritin 0.35 25
Pseudomonas simiae WCS417 0.56 PS417_00405 DNA polymerase I 0.31 PS417_22480 ferritin low > 88
Vibrio cholerae E7946 ATCC 55056 0.56 CSW01_00560 DNA polymerase I 0.56 CSW01_00700 DNA starvation/stationary phase protection protein low > 62
Pseudomonas fluorescens SBW25-INTG 0.56 PFLU_RS00395 DNA polymerase I 0.31 PFLU_RS24120 DNA starvation/stationary phase protection protein low > 109
Rhodanobacter sp. FW510-T8 0.56 OKGIIK_16785 polA DNA polymerase I 0.28 OKGIIK_02150 dps DNA-binding ferritin-like protein (oxidative damage protectant) low > 52
Pseudomonas sp. RS175 0.56 PFR28_04624 DNA polymerase I 0.31 PFR28_03419 DNA protection during starvation protein 2 low > 88
Pseudomonas fluorescens SBW25 0.56 PFLU_RS00395 DNA polymerase I 0.31 PFLU_RS24120 DNA starvation/stationary phase protection protein low > 109
Serratia liquefaciens MT49 0.56 IAI46_24985 DNA polymerase I 0.62 IAI46_14135 DNA starvation/stationary phase protection protein low > 86
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS17885 DNA polymerase I 0.26 QEN71_RS26610 Dps family protein — —
Dickeya dadantii 3937 0.55 DDA3937_RS00105 DNA polymerase I 0.58 DDA3937_RS06890 DNA starvation/stationary phase protection protein — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_0270 DNA polymerase I 0.32 Psyr_1404 Ferritin and Dps low > 86
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_0270 DNA polymerase I 0.32 Psyr_1404 Ferritin and Dps low > 86
Dickeya dianthicola ME23 0.54 DZA65_RS22235 DNA polymerase I 0.59 DZA65_RS07220 DNA starvation/stationary phase protection protein — —
Dickeya dianthicola 67-19 0.54 HGI48_RS21260 DNA polymerase I 0.59 HGI48_RS06880 DNA starvation/stationary phase protection protein — —
Xanthomonas campestris pv. campestris strain 8004 0.54 Xcc-8004.5105.1 DNA polymerase I (EC 2.7.7.7) 0.26 Xcc-8004.1478.1 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) — —
Herbaspirillum seropedicae SmR1 0.53 HSERO_RS02260 DNA polymerase I 0.30 HSERO_RS02145 ferritin 0.62 5
Paraburkholderia graminis OAS925 0.53 ABIE53_004852 DNA polymerase-1 0.31 ABIE53_000838 starvation-inducible DNA-binding protein 0.38 19
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS33610 DNA polymerase I 0.31 BPHYT_RS03480 ferritin 0.20 99
Lysobacter sp. OAE881 0.53 ABIE51_RS02010 DNA polymerase I 0.29 ABIE51_RS05150 Dps family protein low > 62
Paraburkholderia bryophila 376MFSha3.1 0.53 H281DRAFT_06022 DNA polymerase I 0.31 H281DRAFT_04677 starvation-inducible DNA-binding protein 0.40 55
Ralstonia sp. UNC404CL21Col 0.52 ABZR87_RS15680 DNA polymerase I 0.29 ABZR87_RS01245 Dps family protein low > 80
Dechlorosoma suillum PS 0.52 Dsui_0459 DNA polymerase I 0.27 Dsui_0822 DNA-binding ferritin-like protein (oxidative damage protectant) low > 51
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS15050 DNA polymerase I 0.31 RR42_RS17370 ferritin — —
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS03750 DNA polymerase I 0.29 RALBFv3_RS05595 DNA starvation/stationary phase protection protein 0.64 19
Ralstonia solanacearum UW163 0.51 UW163_RS09920 DNA polymerase I 0.29 UW163_RS08030 DNA starvation/stationary phase protection protein — —
Ralstonia solanacearum GMI1000 0.50 RS_RS11195 DNA polymerase I 0.29 RS_RS13455 DNA starvation/stationary phase protection protein low > 80
Ralstonia solanacearum PSI07 0.50 RPSI07_RS13480 DNA polymerase I 0.29 RPSI07_RS11705 DNA starvation/stationary phase protection protein 0.51 32
Acidovorax sp. GW101-3H11 0.49 Ac3H11_1648 DNA polymerase I (EC 2.7.7.7) 0.28 Ac3H11_786 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.48 GFF5584 DNA polymerase I (EC 2.7.7.7) 0.27 GFF2804 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) 0.70 19
Castellaniella sp019104865 MT123 0.48 ABCV34_RS02195 DNA polymerase I 0.23 ABCV34_RS03580 Dps family protein low > 48
Acinetobacter radioresistens SK82 0.48 MPMX26_00574 DNA polymerase I 0.25 MPMX26_01495 DNA protection during starvation protein 2 low > 36
Dinoroseobacter shibae DFL-12 0.39 Dshi_2909 DNA polymerase I (RefSeq) 0.22 Dshi_3839 Ferritin Dps family protein (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.38 PGA1_c31780 DNA polymerase I 0.21 PGA1_c27100 putative ferritin low > 62
Agrobacterium fabrum C58 0.38 Atu0110 DNA polymerase I 0.16 Atu4777 hypothetical protein — —
Rhizobium sp. OAE497 0.38 ABIE40_RS00490 DNA polymerase I 0.19 ABIE40_RS18810 DNA starvation/stationary phase protection protein low > 107
Azospirillum brasilense Sp245 0.38 AZOBR_RS30685 DNA polymerase 0.29 AZOBR_RS12945 ferritin — —
Brevundimonas sp. GW460-12-10-14-LB2 0.37 A4249_RS13840 DNA polymerase I 0.20 A4249_RS05095 DNA starvation/stationary phase protection protein — —
Caulobacter crescentus NA1000 0.37 CCNA_03577 DNA polymerase I 0.27 CCNA_02966 non-specific DNA-binding protein Dps/iron-binding ferritin-like antioxidant protein/ferroxidase low > 66
Caulobacter crescentus NA1000 Δfur 0.37 CCNA_03577 DNA polymerase I 0.27 CCNA_02966 non-specific DNA-binding protein Dps/iron-binding ferritin-like antioxidant protein/ferroxidase low > 67
Echinicola vietnamensis KMM 6221, DSM 17526 0.36 Echvi_1032 DNA polymerase I 0.50 Echvi_0586 DNA-binding ferritin-like protein (oxidative damage protectant) low > 79
Bacteroides ovatus ATCC 8483 0.36 BACOVA_01357 DNA-directed DNA polymerase 0.51 BACOVA_05566 DNA protection during starvation protein low > 94
Mucilaginibacter yixingensis YX-36 DSM 26809 0.36 ABZR88_RS20185 DNA polymerase I 0.41 ABZR88_RS06705 Dps family protein low > 71
Pontibacter actiniarum KMM 6156, DSM 19842 0.36 CA264_16535 DNA polymerase I 0.65 CA264_12205 DNA starvation/stationary phase protection protein — —
Bacteroides thetaiotaomicron VPI-5482 0.36 BT3260 DNA polymerase I (NCBI ptt file) 0.50 BT4715 non-specific DNA-binding protein Dps (NCBI ptt file) low > 81
Bacteroides stercoris CC31F 0.36 HMPREF1181_RS02070 DNA polymerase I 0.45 HMPREF1181_RS02165 DNA starvation/stationary phase protection protein low > 56
Sphingomonas koreensis DSMZ 15582 0.36 Ga0059261_2244 DNA polymerase I (EC 2.7.7.7) 0.18 Ga0059261_2678 DNA-binding ferritin-like protein (oxidative damage protectant) low > 68
Azospirillum sp. SherDot2 0.36 MPMX19_04869 DNA polymerase I 0.27 MPMX19_02373 DNA protection during starvation protein 2 0.38 42
Pedobacter sp. GW460-11-11-14-LB5 0.35 CA265_RS19630 DNA polymerase I 0.36 CA265_RS06325 DNA starvation/stationary phase protection protein 0.54 2
Rhodospirillum rubrum S1H 0.35 Rru_A3514 DNA polymerase A (NCBI) 0.29 Rru_A0333 Ferritin and Dps (NCBI) — —
Parabacteroides merdae CL09T00C40 0.35 HMPREF1078_RS06335 DNA polymerase I 0.51 HMPREF1078_RS01145 Dps family protein low > 61
Synechococcus elongatus PCC 7942 0.31 Synpcc7942_0194 polA DNA polymerase I 0.29 Synpcc7942_0109 DNA-binding ferritin-like protein (oxidative damage protectant)-like — —
Fusobacterium nucleatum SB010 0.25 HUW76_04385 DNA polymerase I 0.17 HUW76_06750 DNA starvation/stationary phase protection protein low > 35

Not shown: 31 genomes with orthologs for HP15_293 only; 3 genomes with orthologs for HP15_3253 only