Conservation of cofitness between Psest_1466 and Psest_2682 in Pseudomonas stutzeri RCH2

78 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_1466 transcriptional regulator, Spx/MgsR family 1.0 Psest_2682 fumarate hydratase, class II 0.24 5
Pseudomonas simiae WCS417 0.81 PS417_06185 ArsC family transcriptional regulator 0.82 PS417_19200 fumarate hydratase
Pseudomonas sp. RS175 0.81 PFR28_00391 hypothetical protein 0.82 PFR28_00889 Fumarate hydratase class II low > 88
Pseudomonas fluorescens FW300-N2E2 0.80 Pf6N2E2_3077 FIG138056: a glutathione-dependent thiol reductase 0.83 Pf6N2E2_2536 Fumarate hydratase class II (EC 4.2.1.2) low > 103
Pseudomonas fluorescens FW300-N1B4 0.80 Pf1N1B4_3078 FIG138056: a glutathione-dependent thiol reductase 0.81 Pf1N1B4_367 Fumarate hydratase class II (EC 4.2.1.2) low > 87
Pseudomonas fluorescens GW456-L13 0.80 PfGW456L13_4715 FIG138056: a glutathione-dependent thiol reductase 0.82 PfGW456L13_2160 Fumarate hydratase class II (EC 4.2.1.2) low > 87
Pseudomonas fluorescens SBW25-INTG 0.80 PFLU_RS06250 ArsC family reductase 0.80 PFLU_RS21170 class II fumarate hydratase low > 109
Pseudomonas fluorescens FW300-N2C3 0.80 AO356_06065 ArsC family transcriptional regulator 0.82 AO356_03545 fumarate hydratase
Pseudomonas fluorescens SBW25 0.80 PFLU_RS06250 ArsC family reductase 0.80 PFLU_RS21170 class II fumarate hydratase low > 109
Pseudomonas fluorescens FW300-N2E3 0.80 AO353_16440 ArsC family transcriptional regulator 0.83 AO353_02150 fumarate hydratase low > 101
Pseudomonas syringae pv. syringae B728a 0.80 Psyr_1337 Conserved hypothetical protein ArsC related protein 0.83 Psyr_3661 Fumarate hydratase, class II low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.80 Psyr_1337 Conserved hypothetical protein ArsC related protein 0.83 Psyr_3661 Fumarate hydratase, class II 0.47 14
Pseudomonas sp. S08-1 0.79 OH686_06505 a glutathione-dependent thiol reductase 0.80 OH686_21015 fumarate hydratase, class II low > 80
Pseudomonas putida KT2440 0.76 PP_1531 putative glutathione-dependent thiol reductase 0.82 PP_1755 fumarate hydratase (class 2)
Rhizobium sp. OAE497 0.67 ABIE40_RS01235 ArsC family reductase 0.56 ABIE40_RS10540 class II fumarate hydratase 0.30 27
Caulobacter crescentus NA1000 Δfur 0.66 CCNA_01714 Spx/MgsR-related protein 0.55 CCNA_02194 fumarate hydratase
Caulobacter crescentus NA1000 0.66 CCNA_01714 Spx/MgsR-related protein 0.55 CCNA_02194 fumarate hydratase
Agrobacterium fabrum C58 0.66 Atu0276 hypothetical protein 0.54 Atu1616 fumarate hydratase
Sinorhizobium meliloti 1021 0.65 SMc00386 hypothetical protein 0.57 SMc00149 fumarate hydratase
Brevundimonas sp. GW460-12-10-14-LB2 0.64 A4249_RS03665 ArsC family reductase 0.56 A4249_RS05005 class II fumarate hydratase
Rhodopseudomonas palustris CGA009 0.64 TX73_011755 ArsC family reductase 0.56 TX73_018130 class II fumarate hydratase low > 86
Bosea sp. OAE506 0.64 ABIE41_RS18295 ArsC family reductase 0.54 ABIE41_RS12805 class II fumarate hydratase
Sphingomonas koreensis DSMZ 15582 0.57 Ga0059261_0315 transcriptional regulator, Spx/MgsR family 0.55 Ga0059261_1040 fumarase, class II (EC 4.2.1.2) low > 68
Shewanella loihica PV-4 0.48 Shew_1863 arsenate reductase and related (RefSeq) 0.35 Shew_0068 fumarate lyase (RefSeq)
Marinobacter adhaerens HP15 0.47 HP15_1161 arsenate reductase 0.38 HP15_3132 fumarate hydratase class II low > 73
Variovorax sp. SCN45 0.47 GFF3093 FIG138056: a glutathione-dependent thiol reductase 0.58 GFF479 Fumarate hydratase class II (EC 4.2.1.2) low > 127
Serratia liquefaciens MT49 0.46 IAI46_18735 ArsC family reductase 0.56 IAI46_11655 class II fumarate hydratase
Variovorax sp. OAS795 0.46 ABID97_RS21655 ArsC family reductase 0.57 ABID97_RS17545 class II fumarate hydratase low > 91
Dechlorosoma suillum PS 0.45 Dsui_2545 transcriptional regulator, Spx/MgsR family 0.57 Dsui_0926 fumarate hydratase, class II low > 51
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_10730 ArsC family reductase 0.42 CSW01_07895 class II fumarate hydratase low > 62
Acidovorax sp. GW101-3H11 0.44 Ac3H11_2613 FIG138056: a glutathione-dependent thiol reductase 0.57 Ac3H11_943 Fumarate hydratase class II (EC 4.2.1.2) low > 79
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS11945 ArsC family transcriptional regulator 0.55 RR42_RS33090 fumarate hydratase
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS10795 arsenate reductase 0.57 HSERO_RS07610 fumarate hydratase
Paraburkholderia bryophila 376MFSha3.1 0.43 H281DRAFT_00598 arsenate reductase 0.57 H281DRAFT_04314 fumarase, class II
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS11755 arsenate reductase 0.59 ABZR87_RS18630 class II fumarate hydratase low > 80
Dickeya dianthicola ME23 0.43 DZA65_RS06505 ArsC family reductase 0.58 DZA65_RS11125 class II fumarate hydratase low > 75
Paraburkholderia graminis OAS925 0.43 ABIE53_002518 arsenate reductase 0.57 ABIE53_003084 fumarate hydratase class II
Dickeya dianthicola 67-19 0.42 HGI48_RS06155 ArsC family reductase 0.57 HGI48_RS10655 class II fumarate hydratase low > 71
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS06360 ArsC family reductase 0.55 QEN71_RS04360 class II fumarate hydratase low > 153
Ralstonia solanacearum UW163 0.42 UW163_RS13635 ArsC family reductase 0.60 UW163_RS21470 class II fumarate hydratase
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS12195 arsenate reductase 0.55 BPHYT_RS14615 fumarate hydratase
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS00305 ArsC family reductase 0.60 RALBFv3_RS17680 class II fumarate hydratase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.42 GFF2187 FIG138056: a glutathione-dependent thiol reductase 0.59 GFF1806 Fumarate hydratase class II (EC 4.2.1.2)
Alteromonas macleodii MIT1002 0.41 MIT1002_01546 Regulatory protein spx 0.36 MIT1002_03167 Fumarate hydratase class II low > 70
Klebsiella michiganensis M5al 0.41 BWI76_RS20865 arsenate reductase 0.59 BWI76_RS16270 fumarate hydratase, class II low > 92
Enterobacter asburiae PDN3 0.41 EX28DRAFT_0190 transcriptional regulator, Spx/MgsR family 0.58 EX28DRAFT_1608 fumarase, class II (EC 4.2.1.2) low > 76
Ralstonia solanacearum PSI07 0.41 RPSI07_RS17170 arsenate reductase 0.60 RPSI07_RS05900 class II fumarate hydratase low > 81
Shewanella amazonensis SB2B 0.41 Sama_1648 hypothetical protein (RefSeq) 0.40 Sama_0822 fumarate hydratase (RefSeq)
Rahnella sp. WP5 0.41 EX31_RS22800 ArsC family reductase 0.56 EX31_RS06965 class II fumarate hydratase low > 89
Dickeya dadantii 3937 0.41 DDA3937_RS06110 ArsC family reductase 0.58 DDA3937_RS10655 class II fumarate hydratase low > 74
Pectobacterium carotovorum WPP14 0.40 HER17_RS15305 ArsC family reductase 0.57 HER17_RS10755 class II fumarate hydratase low > 75
Enterobacter sp. TBS_079 0.40 MPMX20_03332 Protein YffB 0.58 MPMX20_02022 Fumarate hydratase class II low > 85
Mucilaginibacter yixingensis YX-36 DSM 26809 0.40 ABZR88_RS16335 Spx/MgsR family RNA polymerase-binding regulatory protein 0.54 ABZR88_RS20230 class II fumarate hydratase
Escherichia coli ECRC62 0.39 BNILDI_12450 arsC ArsC family reductase 0.59 BNILDI_16945 fumC class II fumarate hydratase
Escherichia coli ECOR38 0.39 HEPCGN_21130 arsC ArsC family reductase 0.58 HEPCGN_06025 fumC class II fumarate hydratase low > 85
Escherichia coli BW25113 0.39 b2471 yffB hypothetical protein (NCBI) 0.58 b1611 fumC fumarate hydratase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_01260 Protein YffB 0.60 OHPLBJKB_02115 Fumarate hydratase class II low > 73
Escherichia coli BL21 0.39 ECD_02362 putative ArsC family reductase 0.58 ECD_01580 fumarate hydratase (fumarase C),aerobic Class II
Escherichia coli Nissle 1917 0.39 ECOLIN_RS14100 ArsC family reductase 0.59 ECOLIN_RS08995 class II fumarate hydratase
Escherichia fergusonii Becca 0.39 EFB2_01417 Protein YffB 0.59 EFB2_02381 Fumarate hydratase class II low > 86
Escherichia coli ECOR27 0.39 NOLOHH_13640 arsC ArsC family reductase 0.59 NOLOHH_18155 fumC class II fumarate hydratase
Escherichia coli ECRC101 0.39 OKFHMN_21960 yffB ArsC family reductase 0.59 OKFHMN_27650 fumC class II fumarate hydratase
Escherichia coli ECRC102 0.39 NIAGMN_19730 yffB ArsC family reductase 0.59 NIAGMN_00425 fumC class II fumarate hydratase
Escherichia coli ECRC101 0.39 MCAODC_12490 yffB ArsC family reductase 0.59 MCAODC_17760 fumC class II fumarate hydratase
Pedobacter sp. GW460-11-11-14-LB5 0.39 CA265_RS17115 arsenate reductase 0.54 CA265_RS23855 fumarate hydratase, class II
Escherichia coli ECRC98 0.39 JDDGAC_25905 yffB ArsC family reductase 0.59 JDDGAC_02240 fumC class II fumarate hydratase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF296 FIG138056: a glutathione-dependent thiol reductase 0.58 GFF4101 Fumarate hydratase class II (EC 4.2.1.2)
Erwinia tracheiphila SCR3 0.38 LU632_RS08360 ArsC family reductase 0.58 LU632_RS12335 fumC class II fumarate hydratase low > 74
Escherichia coli ECRC99 0.38 KEDOAH_06260 arsC ArsC family reductase 0.59 KEDOAH_00455 fumC class II fumarate hydratase
Kangiella aquimarina DSM 16071 0.38 B158DRAFT_1070 transcriptional regulator, Spx/MgsR family 0.38 B158DRAFT_1200 fumarase, class II (EC 4.2.1.2) low > 40
Echinicola vietnamensis KMM 6221, DSM 17526 0.37 Echvi_0148 transcriptional regulator, Spx/MgsR family 0.57 Echvi_1329 fumarate hydratase, class II
Ralstonia solanacearum GMI1000 0.37 RS_RS06975 ArsC family reductase 0.60 RS_RS23320 class II fumarate hydratase
Pantoea sp. MT58 0.35 IAI47_05305 ArsC family reductase 0.57 IAI47_10335 class II fumarate hydratase low > 76
Rhodanobacter denitrificans MT42 0.27 LRK55_RS13980 Spx/MgsR family RNA polymerase-binding regulatory protein 0.41 LRK55_RS00660 class II fumarate hydratase low > 63
Rhodanobacter denitrificans FW104-10B01 0.27 LRK54_RS14260 Spx/MgsR family RNA polymerase-binding regulatory protein 0.41 LRK54_RS00885 class II fumarate hydratase low > 59
Dyella japonica UNC79MFTsu3.2 0.27 ABZR86_RS21560 Spx/MgsR family RNA polymerase-binding regulatory protein 0.42 ABZR86_RS05855 class II fumarate hydratase low > 74
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_03130 Arsenate reductase 0.42 OKGIIK_06345 aspA aspartate ammonia-lyase low > 52
Xanthomonas campestris pv. campestris strain 8004 0.26 Xcc-8004.3540.1 FIG138056: a glutathione-dependent thiol reductase 0.42 Xcc-8004.3403.1 Fumarate hydratase class II (EC 4.2.1.2)
Dinoroseobacter shibae DFL-12 0.20 Dshi_0770 arsenate reductase and related (RefSeq) 0.55 Dshi_2334 fumarate hydratase, class II (RefSeq)

Not shown: 2 genomes with orthologs for Psest_1466 only; 13 genomes with orthologs for Psest_2682 only