| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Phaeobacter inhibens DSM 17395 | 1.0 | PGA1_c14770 | | tRNA-dihydrouridine synthase DusB | 1.0 | PGA1_c02520 | | copper-transporting P-type ATPase ActP | 0.41 | 14 |
| Dinoroseobacter shibae DFL-12 | 0.58 | Dshi_1576 | | putative TIM-barrel protein, nifR3 family (RefSeq) | 0.56 | Dshi_4065 | | heavy metal translocating P-type ATPase (RefSeq) | — | — |
| Agrobacterium fabrum C58 | 0.49 | Atu1444 | | nitrogen regulation protein | 0.53 | Atu1195 | | heavy-metal transporting P-type ATPase | low | > 89 |
| Sinorhizobium meliloti 1021 | 0.48 | SMc01041 | | NIFR3-like protein | 0.52 | SM_b21578 | | copper-transporting P-type ATPase | low | > 103 |
| Sphingomonas koreensis DSMZ 15582 | 0.44 | Ga0059261_0140 | | tRNA-U20-dihydrouridine synthase | 0.53 | Ga0059261_0422 | | copper-(or silver)-translocating P-type ATPase/heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | low | > 68 |
| Azospirillum sp. SherDot2 | 0.42 | MPMX19_01110 | | tRNA-dihydrouridine synthase B | 0.35 | MPMX19_04397 | | Copper-exporting P-type ATPase | low | > 112 |
| Paraburkholderia sabiae LMG 24235 | 0.41 | QEN71_RS26770 | | tRNA dihydrouridine synthase DusB | 0.35 | QEN71_RS17330 | | heavy metal translocating P-type ATPase | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.41 | H281DRAFT_04249 | | tRNA-U20-dihydrouridine synthase | 0.31 | H281DRAFT_03512 | | Cu+-exporting ATPase | low | > 103 |
| Magnetospirillum magneticum AMB-1 | 0.41 | AMB_RS11940 | | tRNA dihydrouridine synthase DusB | 0.29 | AMB_RS09145 | | copper-translocating P-type ATPase | — | — |
| Lysobacter sp. OAE881 | 0.41 | ABIE51_RS16450 | | tRNA dihydrouridine synthase DusB | 0.35 | ABIE51_RS09555 | | heavy metal translocating P-type ATPase | low | > 62 |
| Ralstonia sp. UNC404CL21Col | 0.40 | ABZR87_RS07650 | | tRNA dihydrouridine synthase DusB | 0.32 | ABZR87_RS04235 | | heavy metal translocating P-type ATPase | low | > 80 |
| Marinobacter adhaerens HP15 | 0.40 | HP15_3225 | | tRNA-dihydrouridine synthase B | 0.33 | HP15_3546 | | copper-translocating P-type ATPase | low | > 73 |
| Ralstonia solanacearum PSI07 | 0.39 | RPSI07_RS21520 | | tRNA dihydrouridine synthase DusB | 0.30 | RPSI07_RS08310 | | copper-translocating P-type ATPase | low | > 81 |
| Ralstonia solanacearum UW163 | 0.39 | UW163_RS01890 | | tRNA dihydrouridine synthase DusB | 0.30 | UW163_RS04650 | | copper-translocating P-type ATPase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.39 | RALBFv3_RS11695 | | tRNA dihydrouridine synthase DusB | 0.30 | RALBFv3_RS08960 | | copper-translocating P-type ATPase | low | > 76 |
| Ralstonia solanacearum GMI1000 | 0.39 | RS_RS02515 | | tRNA dihydrouridine synthase DusB | 0.30 | RS_RS16775 | | copper-translocating P-type ATPase | low | > 80 |
| Alteromonas macleodii MIT1002 | 0.39 | MIT1002_03957 | | putative tRNA-dihydrouridine synthase | 0.34 | MIT1002_00284 | | Copper-exporting P-type ATPase A | low | > 70 |
| Variovorax sp. OAS795 | 0.39 | ABID97_RS24735 | | tRNA dihydrouridine synthase DusB | 0.26 | ABID97_RS02825 | | heavy metal translocating P-type ATPase | low | > 91 |
| Burkholderia phytofirmans PsJN | 0.38 | BPHYT_RS16585 | | tRNA-dihydrouridine synthase B | 0.32 | BPHYT_RS34125 | | heavy metal translocating P-type ATPase | low | > 109 |
| Kangiella aquimarina DSM 16071 | 0.38 | B158DRAFT_0164 | | tRNA-U20-dihydrouridine synthase | 0.35 | B158DRAFT_1616 | | copper-(or silver)-translocating P-type ATPase | low | > 40 |
| Pseudomonas sp. S08-1 | 0.38 | OH686_07610 | | tRNA-dihydrouridine synthase DusB | 0.33 | OH686_07395 | | copper-translocating P-type ATPase | low | > 80 |
| Serratia liquefaciens MT49 | 0.38 | IAI46_22775 | | tRNA dihydrouridine synthase DusB | 0.56 | IAI46_13395 | | copper-translocating P-type ATPase | low | > 86 |
| Castellaniella sp019104865 MT123 | 0.38 | ABCV34_RS07960 | | tRNA dihydrouridine synthase DusB | 0.44 | ABCV34_RS04200 | | heavy metal translocating P-type ATPase | low | > 48 |
| Pseudomonas stutzeri RCH2 | 0.38 | Psest_1016 | | putative TIM-barrel protein, nifR3 family | 0.33 | Psest_0738 | | copper-(or silver)-translocating P-type ATPase | low | > 67 |
| Rahnella sp. WP5 | 0.37 | EX31_RS12180 | | tRNA dihydrouridine synthase DusB | 0.31 | EX31_RS22575 | | copper-exporting P-type ATPase CopA | low | > 89 |
| Escherichia coli ECOR27 | 0.37 | NOLOHH_09470 | dusB | tRNA dihydrouridine synthase DusB | 0.33 | NOLOHH_01015 | copA | copper-exporting P-type ATPase CopA | low | > 57 |
| Escherichia coli ECRC101 | 0.37 | OKFHMN_17685 | dusB | tRNA dihydrouridine synthase DusB | 0.33 | OKFHMN_08075 | copA | copper-exporting P-type ATPase CopA | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.37 | LRK54_RS12140 | | tRNA dihydrouridine synthase DusB | 0.28 | LRK54_RS01945 | | heavy metal translocating P-type ATPase | low | > 59 |
| Escherichia coli ECRC102 | 0.37 | NIAGMN_15445 | dusB | tRNA dihydrouridine synthase DusB | 0.33 | NIAGMN_06125 | copA | copper-exporting P-type ATPase CopA | — | — |
| Escherichia coli ECRC62 | 0.37 | BNILDI_02050 | dusB | tRNA dihydrouridine synthase DusB | 0.33 | BNILDI_22435 | copA | copper-exporting P-type ATPase CopA | — | — |
| Escherichia coli BW25113 | 0.37 | b3260 | dusB | tRNA-dihydrouridine synthase B (NCBI) | 0.33 | b0484 | copA | copper transporter (NCBI) | low | > 76 |
| Escherichia coli BL21 | 0.37 | ECD_03118 | | tRNA-dihydrouridine synthase B | 0.33 | ECD_00435 | | copper transporter | low | > 60 |
| Escherichia fergusonii Becca | 0.37 | EFB2_00564 | | tRNA-dihydrouridine synthase B | 0.33 | EFB2_03575 | | Copper-exporting P-type ATPase | low | > 86 |
| Escherichia coli Nissle 1917 | 0.37 | ECOLIN_RS18725 | | tRNA dihydrouridine synthase DusB | 0.33 | ECOLIN_RS02865 | | copper-exporting P-type ATPase CopA | low | > 52 |
| Escherichia coli ECRC101 | 0.37 | MCAODC_08205 | dusB | tRNA dihydrouridine synthase DusB | 0.33 | MCAODC_27295 | copA | copper-exporting P-type ATPase CopA | — | — |
| Klebsiella michiganensis M5al | 0.37 | BWI76_RS25565 | | tRNA dihydrouridine synthase DusB | 0.33 | BWI76_RS06905 | | Cu+ exporting ATPase | — | — |
| Escherichia coli ECOR38 | 0.37 | HEPCGN_16505 | dusB | tRNA dihydrouridine synthase DusB | 0.33 | HEPCGN_06710 | copA | copper-exporting P-type ATPase CopA | low | > 85 |
| Herbaspirillum seropedicae SmR1 | 0.37 | HSERO_RS02050 | | tRNA-dihydrouridine synthase B | 0.29 | HSERO_RS08020 | | heavy metal translocating P-type ATPase | low | > 78 |
| Vibrio cholerae E7946 ATCC 55056 | 0.37 | CSW01_01495 | | tRNA dihydrouridine synthase DusB | 0.33 | CSW01_11300 | | copper-exporting P-type ATPase A | low | > 62 |
| Enterobacter sp. TBS_079 | 0.37 | MPMX20_04169 | | tRNA-dihydrouridine synthase B | 0.32 | MPMX20_01084 | | Copper-exporting P-type ATPase | low | > 85 |
| Pectobacterium carotovorum WPP14 | 0.37 | HER17_RS20235 | | tRNA dihydrouridine synthase DusB | 0.31 | HER17_RS15625 | | copper-exporting P-type ATPase CopA | low | > 75 |
| Pseudomonas sp. RS175 | 0.36 | PFR28_05216 | | tRNA-dihydrouridine synthase B | 0.35 | PFR28_05244 | | Copper-exporting P-type ATPase | low | > 88 |
| Enterobacter asburiae PDN3 | 0.36 | EX28DRAFT_3313 | | putative TIM-barrel protein, nifR3 family | 0.33 | EX28DRAFT_2474 | | copper-(or silver)-translocating P-type ATPase | low | > 76 |
| Pseudomonas fluorescens FW300-N2C3 | 0.36 | AO356_08215 | | tRNA-dihydrouridine synthase B | 0.35 | AO356_08065 | | copper-transporting ATPase | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.36 | Pf6N2E2_3517 | | tRNA dihydrouridine synthase B (EC 1.-.-.-) | 0.35 | Pf6N2E2_3487 | | Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) | low | > 103 |
| Pseudomonas putida KT2440 | 0.36 | PP_4820 | | tRNA-dihydrouridine synthase B | 0.33 | PP_0586 | | cadmium translocating P-type ATPase | low | > 96 |
| Shewanella amazonensis SB2B | 0.36 | Sama_3225 | | tRNA-dihydrouridine synthase B (RefSeq) | 0.31 | Sama_1786 | | copper-translocating P-type ATPase (RefSeq) | low | > 62 |
| Pseudomonas simiae WCS417 | 0.35 | PS417_02950 | | tRNA-dihydrouridine synthase B | 0.31 | PS417_03160 | | metal ABC transporter ATPase | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.35 | AO353_13660 | | tRNA-dihydrouridine synthase B | 0.33 | AO353_06155 | | copper-transporting ATPase | low | > 101 |
| Pseudomonas fluorescens SBW25-INTG | 0.35 | PFLU_RS03025 | | tRNA dihydrouridine synthase DusB | 0.30 | PFLU_RS03240 | | copper-translocating P-type ATPase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.35 | PFLU_RS03025 | | tRNA dihydrouridine synthase DusB | 0.30 | PFLU_RS03240 | | copper-translocating P-type ATPase | low | > 109 |
| Acinetobacter radioresistens SK82 | 0.35 | MPMX26_02127 | | tRNA-dihydrouridine synthase B | 0.52 | MPMX26_01948 | | Copper-transporting P-type ATPase | low | > 36 |
| Pseudomonas fluorescens FW300-N1B4 | 0.35 | Pf1N1B4_1313 | | tRNA dihydrouridine synthase B (EC 1.-.-.-) | 0.34 | Pf1N1B4_1262 | | Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) | 0.36 | 57 |
| Pseudomonas fluorescens GW456-L13 | 0.35 | PfGW456L13_55 | | tRNA dihydrouridine synthase B (EC 1.-.-.-) | 0.33 | PfGW456L13_24 | | Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) | low | > 87 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.35 | Psyr_4404 | | tRNA-U20-dihydrouridine synthase | 0.31 | Psyr_0654 | | Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.35 | Psyr_4404 | | tRNA-U20-dihydrouridine synthase | 0.31 | Psyr_0654 | | Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase | low | > 86 |
| Pantoea sp. MT58 | 0.35 | IAI47_02385 | | tRNA dihydrouridine synthase DusB | 0.32 | IAI47_14400 | | copper-exporting P-type ATPase CopA | low | > 76 |
| Acidovorax sp. GW101-3H11 | 0.34 | Ac3H11_3996 | | tRNA dihydrouridine synthase B (EC 1.-.-.-) | 0.35 | Ac3H11_4218 | | Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) | low | > 79 |
| Shewanella loihica PV-4 | 0.34 | Shew_0330 | | nifR3 family TIM-barrel protein (RefSeq) | 0.32 | Shew_3818 | | copper-translocating P-type ATPase (RefSeq) | low | > 60 |
| Shewanella sp. ANA-3 | 0.32 | Shewana3_0399 | | nifR3 family TIM-barrel protein (RefSeq) | 0.34 | Shewana3_4145 | | copper-translocating P-type ATPase (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.32 | SO0394 | | conserved hypothetical protein (NCBI ptt file) | 0.33 | SO1689 | | cation transport ATPase, E1-E2 family (NCBI ptt file) | low | > 76 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.30 | ABZR88_RS22340 | | tRNA dihydrouridine synthase DusB | 0.23 | ABZR88_RS09650 | | cation-translocating P-type ATPase | low | > 71 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.30 | Echvi_1531 | | putative TIM-barrel protein, nifR3 family | 0.31 | Echvi_4125 | | copper-(or silver)-translocating P-type ATPase | low | > 79 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.29 | CA264_17860 | | tRNA dihydrouridine synthase DusB | 0.34 | CA264_21325 | | copper-translocating P-type ATPase | low | > 74 |
| Bacteroides stercoris CC31F | 0.29 | HMPREF1181_RS01530 | | tRNA dihydrouridine synthase DusB | 0.30 | HMPREF1181_RS09430 | | heavy metal translocating P-type ATPase | low | > 56 |
| Parabacteroides merdae CL09T00C40 | 0.28 | HMPREF1078_RS05375 | | tRNA dihydrouridine synthase DusB | 0.30 | HMPREF1078_RS01895 | | heavy metal translocating P-type ATPase | low | > 61 |
| Mycobacterium tuberculosis H37Rv | 0.27 | Rv0823c | | Possible transcriptional regulatory protein | 0.28 | Rv0969 | | Probable metal cation transporter P-type ATPase CtpV | low | > 58 |
| Synechococcus elongatus PCC 7942 | 0.25 | Synpcc7942_0283 | | Dihydrouridine synthase TIM-barrel protein nifR3 | 0.33 | Synpcc7942_1570 | pacS | Heavy metal translocating P-type ATPase | low | > 38 |
| Fusobacterium nucleatum SB010 | 0.25 | HUW76_04330 | | tRNA-dihydrouridine synthase | 0.32 | HUW76_08385 | | copper-translocating P-type ATPase | low | > 35 |
| Desulfovibrio vulgaris Miyazaki F | 0.19 | DvMF_2019 | | dihydrouridine synthase DuS (RefSeq) | 0.34 | DvMF_3170 | | heavy metal translocating P-type ATPase (RefSeq) | low | > 51 |
Not shown: 16 genomes with orthologs for PGA1_c14770 only; 15 genomes with orthologs for PGA1_c02520 only