| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Marinobacter adhaerens HP15 | 1.0 | HP15_2301 | | response regulator receiver domain protein (CheY-) | 1.0 | HP15_2302 | | flagellar biosynthesis sigma factor FliA | 0.82 | 4 |
| Pseudomonas sp. S08-1 | 0.91 | OH686_02725 | | Chemotaxis regulator - transmits chemoreceptor signals to flagellar motor components CheY | 0.61 | OH686_02730 | | RNA polymerase sigma factor for flagellar operon | 0.53 | 34 |
| Pseudomonas fluorescens FW300-N2E2 | 0.88 | Pf6N2E2_2572 | | Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY | 0.58 | Pf6N2E2_2573 | | RNA polymerase sigma factor for flagellar operon | 0.58 | 26 |
| Shewanella amazonensis SB2B | 0.88 | Sama_2279 | | response regulator receiver protein (RefSeq) | 0.56 | Sama_2280 | fliA | flagellar biosynthesis sigma factor (RefSeq) | low | > 62 |
| Pseudomonas fluorescens FW300-N2C3 | 0.88 | AO356_03725 | | histidine kinase | 0.58 | AO356_03730 | | flagellar biosynthesis sigma factor | 0.28 | 51 |
| Pseudomonas stutzeri RCH2 | 0.87 | Psest_1741 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | 0.58 | Psest_1740 | | RNA polymerase sigma factor, FliA/WhiG family | 0.57 | 10 |
| Shewanella oneidensis MR-1 | 0.87 | SO3209 | cheY-3 | chemotaxis protein CheY (NCBI ptt file) | 0.55 | SO3210 | fliA | RNA polymerase sigma-27 factor (NCBI ptt file) | 0.49 | 2 |
| Shewanella sp. ANA-3 | 0.87 | Shewana3_1360 | | response regulator receiver protein (RefSeq) | 0.55 | Shewana3_1359 | fliA | flagellar biosynthesis sigma factor (RefSeq) | — | — |
| Shewanella loihica PV-4 | 0.87 | Shew_1384 | | response regulator receiver protein (RefSeq) | 0.56 | Shew_1383 | fliA | flagellar biosynthesis sigma factor (RefSeq) | 0.54 | 58 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.86 | Psyr_3436 | | Response regulator receiver | 0.58 | Psyr_3437 | | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.86 | Psyr_3436 | | Response regulator receiver | 0.58 | Psyr_3437 | | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG | 0.52 | 16 |
| Pseudomonas putida KT2440 | 0.86 | PP_4340 | | response regulator for chemotactic signal transduction | 0.58 | PP_4341 | | RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons | low | > 96 |
| Pseudomonas fluorescens SBW25-INTG | 0.86 | PFLU_RS21655 | | response regulator | 0.58 | PFLU_RS21660 | | RNA polymerase sigma factor FliA | 0.31 | 18 |
| Pseudomonas fluorescens SBW25 | 0.86 | PFLU_RS21655 | | response regulator | 0.58 | PFLU_RS21660 | | RNA polymerase sigma factor FliA | low | > 109 |
| Pseudomonas fluorescens GW456-L13 | 0.86 | PfGW456L13_4330 | | Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY | 0.58 | PfGW456L13_4331 | | RNA polymerase sigma factor for flagellar operon | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.85 | AO353_18790 | | histidine kinase | 0.58 | AO353_18785 | | flagellar biosynthesis sigma factor | 0.51 | 27 |
| Pseudomonas fluorescens FW300-N1B4 | 0.84 | Pf1N1B4_3627 | | Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY | 0.58 | Pf1N1B4_3626 | | RNA polymerase sigma factor for flagellar operon | low | > 87 |
| Pseudomonas simiae WCS417 | 0.84 | PS417_19690 | | histidine kinase | 0.58 | PS417_19695 | | flagellar biosynthesis sigma factor | 0.90 | 7 |
| Pseudomonas sp. RS175 | 0.83 | PFR28_00853 | | Chemotaxis protein CheY | 0.58 | PFR28_00852 | | RNA polymerase sigma factor FliA | low | > 88 |
| Vibrio cholerae E7946 ATCC 55056 | 0.81 | CSW01_10330 | | chemotaxis protein CheY | 0.52 | CSW01_10335 | | RNA polymerase sigma factor FliA | low | > 62 |
| Alteromonas macleodii MIT1002 | 0.81 | MIT1002_01104 | | Chemotaxis protein CheY | 0.56 | MIT1002_01103 | | Sigma-F factor | low | > 70 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.77 | Xcc-8004.2833.1 | | Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY | 0.45 | Xcc-8004.2832.1 | | RNA polymerase sigma factor for flagellar operon | low | > 74 |
| Lysobacter sp. OAE881 | 0.76 | ABIE51_RS16870 | | chemotaxis response regulator CheY | 0.49 | ABIE51_RS16865 | | RNA polymerase sigma factor FliA | low | > 62 |
| Rhodanobacter denitrificans FW104-10B01 | 0.75 | LRK54_RS13585 | | chemotaxis response regulator CheY | 0.53 | LRK54_RS13580 | | RNA polymerase sigma factor FliA | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.75 | LRK55_RS13325 | | chemotaxis response regulator CheY | 0.53 | LRK55_RS13320 | | RNA polymerase sigma factor FliA | low | > 63 |
| Dyella japonica UNC79MFTsu3.2 | 0.73 | ABZR86_RS20270 | | chemotaxis response regulator CheY | 0.50 | ABZR86_RS20265 | | RNA polymerase sigma factor FliA | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.70 | OKGIIK_02835 | cheY | chemotaxis response regulator CheY | 0.53 | OKGIIK_02830 | fliA | RNA polymerase sigma factor FliA | low | > 52 |
| Dechlorosoma suillum PS | 0.70 | Dsui_1719 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | 0.45 | Dsui_1726 | | RNA polymerase sigma factor, FliA/WhiG family | low | > 51 |
| Dickeya dianthicola 67-19 | 0.70 | HGI48_RS13565 | | chemotaxis response regulator CheY | 0.46 | HGI48_RS13350 | | RNA polymerase sigma factor FliA | low | > 71 |
| Dickeya dianthicola ME23 | 0.70 | DZA65_RS14050 | | chemotaxis protein CheY | 0.46 | DZA65_RS13835 | | RNA polymerase sigma factor FliA | 0.94 | 14 |
| Dickeya dadantii 3937 | 0.69 | DDA3937_RS13520 | | chemotaxis response regulator CheY | 0.46 | DDA3937_RS13300 | | RNA polymerase sigma factor FliA | 0.92 | 23 |
| Cupriavidus basilensis FW507-4G11 | 0.69 | RR42_RS35780 | | chemotaxis protein CheY | 0.43 | RR42_RS35750 | | DNA-directed RNA polymerase sigma-70 factor | low | > 128 |
| Pectobacterium carotovorum WPP14 | 0.69 | HER17_RS08125 | | chemotaxis response regulator CheY | 0.44 | HER17_RS08355 | | RNA polymerase sigma factor FliA | low | > 75 |
| Pantoea sp. MT58 | 0.69 | IAI47_08335 | | chemotaxis response regulator CheY | 0.47 | IAI47_08160 | | RNA polymerase sigma factor FliA | 0.37 | 62 |
| Erwinia tracheiphila SCR3 | 0.68 | LU632_RS13520 | cheY | chemotaxis response regulator CheY | 0.47 | LU632_RS13785 | | RNA polymerase sigma factor FliA | low | > 74 |
| Paraburkholderia sabiae LMG 24235 | 0.68 | QEN71_RS28980 | | chemotaxis response regulator CheY | 0.45 | QEN71_RS28940 | | RNA polymerase sigma factor FliA | low | > 153 |
| Castellaniella sp019104865 MT123 | 0.68 | ABCV34_RS05810 | | chemotaxis response regulator CheY | 0.42 | ABCV34_RS05605 | | RNA polymerase sigma factor FliA | low | > 48 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.68 | H281DRAFT_05748 | | response regulator receiver protein | 0.46 | H281DRAFT_05756 | | RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.68 | ABIE53_000118 | | two-component system chemotaxis response regulator CheY | 0.46 | ABIE53_000108 | | RNA polymerase sigma factor for flagellar operon FliA | low | > 113 |
| Rahnella sp. WP5 | 0.68 | EX31_RS11355 | | chemotaxis protein CheY | 0.46 | EX31_RS09450 | | RNA polymerase sigma factor FliA | 0.54 | 47 |
| Burkholderia phytofirmans PsJN | 0.68 | BPHYT_RS18965 | | chemotaxis protein CheY | 0.45 | BPHYT_RS18925 | | RNA polymerase sigma70 | 0.27 | 51 |
| Escherichia coli ECOR27 | 0.68 | NOLOHH_16595 | cheY | chemotaxis regulatory protein CheY | 0.47 | NOLOHH_16400 | fliA | RNA polymerase sigma factor FliA | — | — |
| Escherichia coli ECRC101 | 0.68 | OKFHMN_26155 | cheY | chemotaxis regulatory protein CheY | 0.47 | OKFHMN_25780 | fliA | RNA polymerase sigma factor FliA | — | — |
| Serratia liquefaciens MT49 | 0.68 | IAI46_16010 | | chemotaxis response regulator CheY | 0.46 | IAI46_15785 | | RNA polymerase sigma factor FliA | 0.58 | 4 |
| Escherichia coli ECOR38 | 0.68 | HEPCGN_04575 | cheY | chemotaxis regulatory protein CheY | 0.47 | HEPCGN_04135 | fliA | RNA polymerase sigma factor FliA | low | > 85 |
| Escherichia coli ECRC101 | 0.68 | MCAODC_19250 | cheY | chemotaxis regulatory protein CheY | 0.47 | MCAODC_19610 | fliA | RNA polymerase sigma factor FliA | — | — |
| Enterobacter sp. TBS_079 | 0.68 | MPMX20_02786 | | Chemotaxis protein CheY | 0.47 | MPMX20_02847 | | RNA polymerase sigma factor FliA | 0.63 | 30 |
| Escherichia coli ECRC99 | 0.68 | KEDOAH_01950 | cheY | chemotaxis regulatory protein CheY | 0.47 | KEDOAH_02310 | fliA | RNA polymerase sigma factor FliA | — | — |
| Escherichia coli ECRC98 | 0.68 | JDDGAC_00730 | cheY | chemotaxis regulatory protein CheY | 0.47 | JDDGAC_00370 | fliA | RNA polymerase sigma factor FliA | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.68 | OHPLBJKB_01846 | | Chemotaxis protein CheY | 0.47 | OHPLBJKB_01807 | | RNA polymerase sigma factor FliA | low | > 73 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.68 | GFF1663 | | Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY | 0.47 | GFF1690 | | RNA polymerase sigma factor for flagellar operon | low | > 78 |
| Escherichia coli ECRC62 | 0.68 | BNILDI_15385 | cheY | chemotaxis regulatory protein CheY | 0.47 | BNILDI_15190 | fliA | RNA polymerase sigma factor FliA | — | — |
| Escherichia fergusonii Becca | 0.68 | EFB2_02061 | | Chemotaxis protein CheY | 0.47 | EFB2_02023 | | RNA polymerase sigma factor FliA | low | > 86 |
| Escherichia coli Nissle 1917 | 0.68 | ECOLIN_RS10750 | | chemotaxis response regulator CheY | 0.47 | ECOLIN_RS10975 | | RNA polymerase sigma factor FliA | — | — |
| Escherichia coli BW25113 | 0.68 | b1882 | cheY | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | 0.47 | b1922 | fliA | flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons (VIMSS) | low | > 76 |
| Escherichia coli ECRC102 | 0.68 | NIAGMN_01905 | cheY | chemotaxis regulatory protein CheY | 0.47 | NIAGMN_02270 | fliA | RNA polymerase sigma factor FliA | — | — |
| Enterobacter asburiae PDN3 | 0.67 | EX28DRAFT_0674 | | Response regulator receiver domain | 0.47 | EX28DRAFT_0625 | | RNA polymerase sigma factor, FliA/WhiG family | low | > 76 |
| Variovorax sp. SCN45 | 0.67 | GFF5768 | | Chemotaxis regulator - transmits chemoreceptor signals to flagellar motor components CheY | 0.43 | GFF5774 | | RNA polymerase sigma factor for flagellar operon | — | — |
| Herbaspirillum seropedicae SmR1 | 0.67 | HSERO_RS10130 | | chemotaxis protein CheY | 0.45 | HSERO_RS10160 | | flagellar biosynthesis sigma factor | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.66 | RALBFv3_RS17420 | | chemotaxis protein CheY | 0.43 | RALBFv3_RS17485 | | RNA polymerase sigma factor FliA | low | > 76 |
| Ralstonia solanacearum UW163 | 0.66 | UW163_RS21730 | | chemotaxis protein CheY | 0.43 | UW163_RS21665 | | RNA polymerase sigma factor FliA | — | — |
| Ralstonia sp. UNC404CL21Col | 0.66 | ABZR87_RS17995 | | chemotaxis response regulator CheY | 0.44 | ABZR87_RS18040 | | RNA polymerase sigma factor FliA | 0.41 | 34 |
| Ralstonia solanacearum GMI1000 | 0.65 | RS_RS23890 | | chemotaxis protein CheY | 0.42 | RS_RS23830 | | RNA polymerase sigma factor FliA | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.65 | RPSI07_RS06225 | | chemotaxis protein CheY | 0.42 | RPSI07_RS06165 | | RNA polymerase sigma factor FliA | low | > 81 |
| Desulfovibrio vulgaris Miyazaki F | 0.62 | DvMF_2010 | | response regulator receiver protein (RefSeq) | 0.31 | DvMF_2011 | | RNA polymerase, sigma 28 subunit, FliA/WhiG (RefSeq) | 0.41 | 9 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.61 | DVU3228 | cheY-3 | chemotaxis protein CheY (TIGR) | 0.30 | DVU3229 | fliA | RNA polymerase sigma factor for flagellar operon FliA (TIGR) | low | > 55 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.61 | GFF1435 | | Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY | 0.39 | GFF1428 | | RNA polymerase sigma factor for flagellar operon | — | — |
| Acidovorax sp. GW101-3H11 | 0.54 | Ac3H11_1387 | | Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY | 0.41 | Ac3H11_1381 | | RNA polymerase sigma factor for flagellar operon | low | > 79 |
| Sphingomonas koreensis DSMZ 15582 | 0.39 | Ga0059261_1116 | | Response regulator receiver domain | 0.27 | Ga0059261_2081 | | RNA polymerase sigma factor, FliA/WhiG family | low | > 68 |
Not shown: 15 genomes with orthologs for HP15_2301 only; 0 genomes with orthologs for HP15_2302 only