Conservation of cofitness between GFF403 and GFF2056 in Sphingobium sp. HT1-2

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF403 Aspartate aminotransferase (EC 2.6.1.1) 1.0 GFF2056 Acetolactate synthase small subunit (EC 2.2.1.6) 0.83 28
Sphingomonas koreensis DSMZ 15582 0.73 Ga0059261_2226 Aspartate/tyrosine/aromatic aminotransferase 0.73 Ga0059261_0067 acetolactate synthase, small subunit (EC 2.2.1.6) 0.99 11
Caulobacter crescentus NA1000 Δfur 0.62 CCNA_01603 aspartate aminotransferase 0.52 CCNA_02186 acetolactate synthase small subunit low > 67
Caulobacter crescentus NA1000 0.62 CCNA_01603 aspartate aminotransferase 0.52 CCNA_02186 acetolactate synthase small subunit low > 66
Azospirillum sp. SherDot2 0.62 MPMX19_02392 Aspartate/prephenate aminotransferase 0.64 MPMX19_01775 Acetolactate synthase isozyme 3 small subunit
Azospirillum brasilense Sp245 0.62 AZOBR_RS12970 aspartate aminotransferase 0.65 AZOBR_RS06565 acetolactate synthase
Xanthobacter sp. DMC5 0.60 GFF4663 Aspartate/prephenate aminotransferase 0.59 GFF171 Acetolactate synthase small subunit
Dinoroseobacter shibae DFL-12 0.59 Dshi_0762 aminotransferase class I and II (RefSeq) 0.61 Dshi_1781 acetolactate synthase, small subunit (RefSeq)
Rhodospirillum rubrum S1H 0.59 Rru_A1135 Aminotransferase, class I and II (NCBI) 0.63 Rru_A0468 Acetolactate synthase, small subunit (NCBI)
Phaeobacter inhibens DSM 17395 0.58 PGA1_c21250 aspartate aminotransferase AatA 0.63 PGA1_c20220 acetolactate synthase isozyme 3 small subunit low > 62
Rhodopseudomonas palustris CGA009 0.58 TX73_022440 pyridoxal phosphate-dependent aminotransferase 0.57 TX73_010470 acetolactate synthase small subunit
Rhizobium sp. OAE497 0.57 ABIE40_RS12925 pyridoxal phosphate-dependent aminotransferase 0.54 ABIE40_RS11490 acetolactate synthase small subunit low > 107
Sinorhizobium meliloti 1021 0.57 SMc01578 aspartate aminotransferase 0.56 SMc01430 acetolactate synthase 3 regulatory subunit 0.71 14
Bosea sp. OAE506 0.56 ABIE41_RS11765 pyridoxal phosphate-dependent aminotransferase 0.58 ABIE41_RS12905 acetolactate synthase small subunit
Agrobacterium fabrum C58 0.56 Atu2196 aspartate aminotransferase A 0.57 Atu2035 acetolactate synthase, small subunit
Magnetospirillum magneticum AMB-1 0.53 AMB_RS02875 pyridoxal phosphate-dependent aminotransferase 0.58 AMB_RS17745 acetolactate synthase small subunit
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS15480 pyridoxal phosphate-dependent aminotransferase 0.40 PFLU_RS25645 acetolactate synthase small subunit low > 109
Pseudomonas fluorescens SBW25 0.53 PFLU_RS15480 pyridoxal phosphate-dependent aminotransferase 0.40 PFLU_RS25645 acetolactate synthase small subunit low > 109
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_5070 Aspartate aminotransferase (EC 2.6.1.1) 0.40 Pf1N1B4_2879 Acetolactate synthase small subunit (EC 2.2.1.6) low > 87
Pseudomonas fluorescens FW300-N2C3 0.52 AO356_25355 aspartate aminotransferase 0.40 AO356_16175 acetolactate synthase 3 regulatory subunit low > 104
Ralstonia solanacearum GMI1000 0.52 RS_RS23085 pyridoxal phosphate-dependent aminotransferase 0.42 RS_RS10415 acetolactate synthase small subunit low > 80
Variovorax sp. SCN45 0.51 GFF5025 Aspartate aminotransferase (EC 2.6.1.1) 0.43 GFF1159 Acetolactate synthase small subunit (EC 2.2.1.6) low > 127
Acidovorax sp. GW101-3H11 0.51 Ac3H11_1602 Aspartate aminotransferase (EC 2.6.1.1) 0.42 Ac3H11_526 Acetolactate synthase small subunit (EC 2.2.1.6) low > 79
Ralstonia solanacearum PSI07 0.51 RPSI07_RS05665 pyridoxal phosphate-dependent aminotransferase 0.42 RPSI07_RS14260 acetolactate synthase small subunit low > 81
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS35305 aspartate aminotransferase 0.42 RR42_RS05440 acetolactate synthase
Variovorax sp. OAS795 0.50 ABID97_RS04080 pyridoxal phosphate-dependent aminotransferase 0.42 ABID97_RS14890 acetolactate synthase small subunit low > 91
Pseudomonas sp. BP01 0.50 JOY50_RS13660 pyridoxal phosphate-dependent aminotransferase 0.40 JOY50_RS27765 ilvN acetolactate synthase small subunit low > 84
Ralstonia solanacearum UW163 0.49 UW163_RS21205 pyridoxal phosphate-dependent aminotransferase 0.42 UW163_RS10680 acetolactate synthase small subunit
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS17935 pyridoxal phosphate-dependent aminotransferase 0.42 RALBFv3_RS03045 acetolactate synthase small subunit low > 76
Rahnella sp. WP5 0.48 EX31_RS17525 pyridoxal phosphate-dependent aminotransferase 0.40 EX31_RS03660 acetolactate synthase small subunit low > 89
Acinetobacter baumannii LAC-4 0.48 RR41_RS04925 pyridoxal phosphate-dependent aminotransferase 0.43 RR41_RS16330 acetolactate synthase small subunit low > 55
Pseudomonas simiae WCS417 0.48 PS417_19025 aspartate aminotransferase 0.40 PS417_23805 acetolactate synthase 3 regulatory subunit low > 88
Dickeya dianthicola ME23 0.47 DZA65_RS19800 pyridoxal phosphate-dependent aminotransferase 0.42 DZA65_RS19180 acetolactate synthase small subunit low > 75
Dickeya dianthicola 67-19 0.47 HGI48_RS18665 pyridoxal phosphate-dependent aminotransferase 0.42 HGI48_RS18035 acetolactate synthase small subunit low > 71
Acinetobacter radioresistens SK82 0.46 MPMX26_02146 Aspartate/prephenate aminotransferase 0.43 MPMX26_00473 Acetolactate synthase isozyme 3 small subunit 0.64 17
Methylophilus sp. DMC18 0.46 GFF1121 Aspartate/prephenate aminotransferase 0.46 GFF2520 Acetolactate synthase isozyme 3 small subunit
Klebsiella michiganensis M5al 0.46 BWI76_RS10245 aspartate aminotransferase 0.39 BWI76_RS04700 acetolactate synthase small subunit low > 92
Marinobacter adhaerens HP15 0.46 HP15_1371 aspartate aminotransferase 0.41 HP15_532 acetolactate synthase 3 regulatory subunit
Dickeya dadantii 3937 0.46 DDA3937_RS08230 pyridoxal phosphate-dependent aminotransferase 0.42 DDA3937_RS18100 acetolactate synthase small subunit low > 74
Cellulophaga baltica 18 0.45 M666_RS08600 pyridoxal phosphate-dependent aminotransferase 0.16 M666_RS14925 acetolactate synthase small subunit low > 67
Pseudomonas lactucae CFBP13502 0.45 GEMAOFIL_01711 Aspartate/prephenate aminotransferase 0.40 GEMAOFIL_04912 Acetolactate synthase isozyme 3 small subunit low > 93
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_1496 Aspartate aminotransferase (EC 2.6.1.1) 0.40 Pf6N2E2_5176 Acetolactate synthase small subunit (EC 2.2.1.6) low > 103
Synechococcus elongatus PCC 7942 0.42 Synpcc7942_2545 aspC aspartate aminotransferase 0.35 Synpcc7942_2434 ilvH acetolactate synthase 3 regulatory subunit
Mucilaginibacter yixingensis YX-36 DSM 26809 0.40 ABZR88_RS15900 pyridoxal phosphate-dependent aminotransferase 0.20 ABZR88_RS11585 acetolactate synthase small subunit 0.79 13
Desulfovibrio vulgaris Miyazaki F 0.39 DvMF_2204 aminotransferase class I and II (RefSeq) 0.41 DvMF_0154 ilvH acetolactate synthase 3 regulatory subunit (RefSeq) low > 51
Echinicola vietnamensis KMM 6221, DSM 17526 0.38 Echvi_0675 Aspartate/tyrosine/aromatic aminotransferase 0.18 Echvi_2057 acetohydroxybutanoate synthase regulatory subunit (EC 2.2.1.6) (from data)
Synechocystis sp000284455 PCC 6803 0.38 SGL_RS13785 pyridoxal phosphate-dependent aminotransferase 0.37 SGL_RS13860 acetolactate synthase small subunit
Desulfovibrio vulgaris Hildenborough JW710 0.37 DVU3223 aspB aspartate aminotransferase (TIGR) 0.40 DVU1377 ilvN-2 acetolactate synthase, small subunit (TIGR) low > 55
Pontibacter actiniarum KMM 6156, DSM 19842 0.37 CA264_01120 aspartate aminotransferase 0.17 CA264_06925 acetolactate synthase small subunit
Bifidobacterium breve UCC2003 0.33 BBR_RS19435 pyridoxal phosphate-dependent aminotransferase 0.37 BBR_RS12345 acetolactate synthase small subunit low > 34
Pseudomonas sp. RS175 0.22 PFR28_02468 Arginine--pyruvate transaminase AruH 0.40 PFR28_03698 Acetolactate synthase isozyme 3 small subunit low > 88
Pseudomonas putida KT2440 0.22 PP_3721 arginine:pyruvate transaminase AruH (EC 2.6.1.84) (from data) 0.40 PP_4679 acetohydroxybutanoate synthase / acetolactate synthase low > 96
Methanococcus maripaludis S2 0.22 MMP_RS05545 pyridoxal phosphate-dependent aminotransferase 0.39 MMP_RS03420 acetolactate synthase small subunit low > 25
Pseudomonas fluorescens GW456-L13 0.22 PfGW456L13_3206 Aspartate aminotransferase (EC 2.6.1.1) 0.40 PfGW456L13_1539 Acetolactate synthase small subunit (EC 2.2.1.6) low > 87
Pseudomonas aeruginosa PA14 0.21 IKLFDK_28660 Arginine--pyruvate transaminase AruH 0.40 IKLFDK_30150 acetolactate synthase small subunit
Methanococcus maripaludis JJ 0.21 MMJJ_RS08820 pyridoxal phosphate-dependent aminotransferase 0.39 MMJJ_RS01645 acetolactate synthase small subunit low > 28
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS27000 aspartate aminotransferase 0.42 BPHYT_RS06550 acetolactate synthase low > 109
Pseudomonas sp. SVBP6 0.21 COO64_RS20990 pyridoxal phosphate-dependent aminotransferase 0.39 COO64_RS15000 ilvN acetolactate synthase small subunit low > 93
Pseudomonas sp. DMC3 0.21 GFF2929 Arginine--pyruvate transaminase AruH 0.40 GFF4051 Acetolactate synthase isozyme 3 small subunit low > 89
Mycobacterium tuberculosis H37Rv 0.17 Rv0337c Probable aspartate aminotransferase AspC (transaminase A) (ASPAT) 0.30 Rv3002c Probable acetolactate synthase (small subunit) IlvN (acetohydroxy-acid synthase) (AHAS) (ALS)
Alteromonas macleodii MIT1002 0.16 MIT1002_02306 Glutamate-pyruvate aminotransferase AlaA 0.43 MIT1002_00504 Acetolactate synthase isozyme 3 small subunit 0.82 19
Erwinia amylovora T8 0.15 OLJFJH_11400 Glutamate-pyruvate aminotransferase AlaA 0.41 OLJFJH_01275 acetolactate synthase small subunit low > 58
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.15 GFF1894 Aspartate aminotransferase (EC 2.6.1.1) 0.39 GFF160 Acetolactate synthase small subunit (EC 2.2.1.6) low > 78
Erwinia tracheiphila SCR3 0.14 LU632_RS07955 pyridoxal phosphate-dependent aminotransferase 0.41 LU632_RS02890 ilvN acetolactate synthase small subunit low > 74
Vibrio cholerae E7946 ATCC 55056 0.14 CSW01_09870 pyridoxal phosphate-dependent aminotransferase 0.38 CSW01_12560 acetolactate synthase small subunit low > 62
Erwinia tracheiphila HP pepo 2.2 0.14 IJEDHG_18035 aspB aminotransferase 0.41 IJEDHG_05985 ilvN acetolactate synthase small subunit low > 61
Shewanella amazonensis SB2B 0.13 Sama_1697 aminotransferase AlaT (RefSeq) 0.39 Sama_2019 ilvH acetolactate synthase 3 regulatory subunit (RefSeq) low > 62
Shewanella sp. ANA-3 0.12 Shewana3_2145 aminotransferase AlaT (RefSeq) 0.42 Shewana3_2270 ilvH acetolactate synthase 3 regulatory subunit (RefSeq) low > 73
Shewanella oneidensis MR-1 0.12 SO2483 aspartate aminotransferase, putative (NCBI ptt file) 0.42 SO2278 ilvH acetolactate synthase III, small subunit (NCBI ptt file)
Shewanella loihica PV-4 0.12 Shew_1914 aminotransferase AlaT (RefSeq) 0.39 Shew_1775 acetolactate synthase 3 regulatory subunit (RefSeq) 0.52 8

Not shown: 15 genomes with orthologs for GFF403 only; 34 genomes with orthologs for GFF2056 only