| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Enterobacter asburiae PDN3 | 1.0 | EX28DRAFT_3669 | | 3-isopropylmalate dehydrogenase | 1.0 | EX28DRAFT_4444 | | threonine ammonia-lyase, biosynthetic, long form | 0.94 | 3 |
| Enterobacter sp. TBS_079 | 0.99 | MPMX20_00768 | | 3-isopropylmalate dehydrogenase | 0.99 | MPMX20_04498 | | L-threonine dehydratase biosynthetic IlvA | 0.95 | 4 |
| Klebsiella michiganensis M5al | 0.95 | BWI76_RS04675 | | 3-isopropylmalate dehydrogenase | 0.94 | BWI76_RS00980 | | PLP-dependent threonine dehydratase | 0.94 | 5 |
| Klebsiella pneumoniae MKP103 | 0.95 | KDGMDA_12905 | | 3-isopropylmalate dehydrogenase | 0.93 | KDGMDA_09495 | | threonine ammonia-lyase biosynthetic | low | > 95 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.94 | GFF165 | | 3-isopropylmalate dehydrogenase (EC 1.1.1.85) | 0.93 | GFF2900 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 78 |
| Escherichia fergusonii Becca | 0.94 | EFB2_03972 | | 3-isopropylmalate dehydrogenase | 0.93 | EFB2_04864 | | L-threonine dehydratase biosynthetic IlvA | low | > 86 |
| Escherichia coli Nissle 1917 | 0.94 | ECOLIN_RS00395 | | 3-isopropylmalate dehydrogenase | 0.93 | ECOLIN_RS21670 | | threonine ammonia-lyase, biosynthetic | low | > 55 |
| Escherichia coli ECOR38 | 0.94 | HEPCGN_08700 | leuB | 3-isopropylmalate dehydrogenase | 0.93 | HEPCGN_13345 | ilvA | threonine ammonia-lyase, biosynthetic | 0.92 | 42 |
| Escherichia coli ECRC102 | 0.94 | NIAGMN_08570 | leuB | 3-isopropylmalate dehydrogenase | 0.93 | NIAGMN_12390 | ilvA | threonine ammonia-lyase, biosynthetic | 0.98 | 24 |
| Escherichia coli ECRC99 | 0.94 | KEDOAH_17435 | leuB | 3-isopropylmalate dehydrogenase | 0.93 | KEDOAH_13515 | ilvA | threonine ammonia-lyase, biosynthetic | — | — |
| Escherichia coli ECRC98 | 0.94 | JDDGAC_14315 | leuB | 3-isopropylmalate dehydrogenase | 0.93 | JDDGAC_18255 | ilvA | threonine ammonia-lyase, biosynthetic | 0.97 | 8 |
| Escherichia coli ECRC100 | 0.94 | OKFHMN_10720 | leuB | 3-isopropylmalate dehydrogenase | 0.93 | OKFHMN_14635 | ilvA | threonine ammonia-lyase, biosynthetic | 0.98 | 26 |
| Escherichia coli ECRC101 | 0.94 | MCAODC_01235 | leuB | 3-isopropylmalate dehydrogenase | 0.93 | MCAODC_05140 | ilvA | threonine ammonia-lyase, biosynthetic | 0.96 | 5 |
| Escherichia coli BW25113 | 0.93 | b0073 | leuB | 3-isopropylmalate dehydrogenase (VIMSS) | 0.93 | b3772 | ilvA | threonine dehydratase (NCBI) | 0.96 | 7 |
| Escherichia coli BL21 | 0.93 | ECD_00075 | | 3-isopropylmalate dehydrogenase, NAD(+)-dependent | 0.93 | ECD_03650 | | l-threonine dehydratase, biosynthetic; also known as threonine deaminase | 0.95 | 13 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.93 | OHPLBJKB_03584 | | 3-isopropylmalate dehydrogenase | 0.93 | OHPLBJKB_04281 | | L-threonine dehydratase biosynthetic IlvA | low | > 74 |
| Escherichia coli ECRC62 | 0.93 | BNILDI_08545 | leuA | 2-isopropylmalate synthase | 0.93 | BNILDI_04755 | ilvA | threonine ammonia-lyase, biosynthetic | 0.97 | 21 |
| Escherichia coli ECOR27 | 0.93 | NOLOHH_03065 | leuA | 2-isopropylmalate synthase | 0.93 | NOLOHH_06770 | ilvA | threonine ammonia-lyase, biosynthetic | 0.94 | 31 |
| Dickeya dianthicola 67-19 | 0.88 | HGI48_RS18060 | | 3-isopropylmalate dehydrogenase | 0.87 | HGI48_RS20290 | | threonine ammonia-lyase, biosynthetic | 0.73 | 70 |
| Dickeya dadantii 3937 | 0.88 | DDA3937_RS18120 | | 3-isopropylmalate dehydrogenase | 0.86 | DDA3937_RS20150 | | threonine ammonia-lyase, biosynthetic | 0.73 | 19 |
| Dickeya dianthicola ME23 | 0.87 | DZA65_RS19205 | | 3-isopropylmalate dehydrogenase | 0.84 | DZA65_RS21330 | | threonine ammonia-lyase, biosynthetic | 0.87 | 9 |
| Pectobacterium carotovorum WPP14 | 0.87 | HER17_RS03080 | | 3-isopropylmalate dehydrogenase | 0.84 | HER17_RS01080 | | threonine ammonia-lyase, biosynthetic | 0.95 | 35 |
| Rahnella sp. WP5 | 0.87 | EX31_RS03685 | | 3-isopropylmalate dehydrogenase | 0.81 | EX31_RS15010 | | threonine ammonia-lyase, biosynthetic | 0.93 | 53 |
| Serratia liquefaciens MT49 | 0.87 | IAI46_03350 | | 3-isopropylmalate dehydrogenase | 0.84 | IAI46_24340 | | threonine ammonia-lyase, biosynthetic | 0.55 | 47 |
| Erwinia amylovora T8 | 0.85 | OLJFJH_01290 | | 3-isopropylmalate dehydrogenase | 0.85 | OLJFJH_06235 | | threonine ammonia-lyase biosynthetic | 0.87 | 36 |
| Erwinia tracheiphila HP pepo 2.2 | 0.82 | IJEDHG_06000 | leuB | 3-isopropylmalate dehydrogenase | 0.84 | IJEDHG_09110 | ilvA | threonine ammonia-lyase biosynthetic | low | > 61 |
| Erwinia tracheiphila SCR3 | 0.82 | LU632_RS02875 | leuB | 3-isopropylmalate dehydrogenase | 0.84 | LU632_RS24395 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 74 |
| Pantoea agglomerans CFBP13505 P0401 | 0.82 | PagCFBP13505_RS12995 | | 3-isopropylmalate dehydrogenase | 0.85 | PagCFBP13505_RS20925 | | threonine ammonia-lyase, biosynthetic | 0.61 | 40 |
| Pantoea sp. MT58 | 0.82 | IAI47_16005 | | 3-isopropylmalate dehydrogenase | 0.84 | IAI47_01040 | | threonine ammonia-lyase, biosynthetic | 0.98 | 8 |
| Vibrio cholerae E7946 ATCC 55056 | 0.77 | CSW01_12600 | | 3-isopropylmalate dehydrogenase | 0.68 | CSW01_00135 | | threonine ammonia-lyase, biosynthetic | low | > 62 |
| Shewanella sp. ANA-3 | 0.70 | Shewana3_3760 | | 3-isopropylmalate dehydrogenase (RefSeq) | 0.56 | Shewana3_0359 | | threonine dehydratase (RefSeq) | 0.87 | 59 |
| Shewanella oneidensis MR-1 | 0.70 | SO4235 | leuB | 3-isopropylmalate dehydrogenase (NCBI ptt file) | 0.57 | SO4344 | ilvA | threonine dehydratase (NCBI ptt file) | 0.88 | 65 |
| Shewanella loihica PV-4 | 0.69 | Shew_3471 | | 3-isopropylmalate dehydrogenase (RefSeq) | 0.55 | Shew_0293 | | threonine dehydratase (RefSeq) | 0.98 | 20 |
| Shewanella amazonensis SB2B | 0.69 | Sama_0336 | | 3-isopropylmalate dehydrogenase (RefSeq) | 0.58 | Sama_3278 | | threonine dehydratase (RefSeq) | 0.94 | 21 |
| Alteromonas macleodii MIT1002 | 0.63 | MIT1002_00948 | | 3-isopropylmalate dehydrogenase | 0.54 | MIT1002_04040 | | L-threonine dehydratase biosynthetic IlvA | 0.99 | 5 |
| Pseudomonas segetis P6 | 0.53 | MPMX49_03071 | | 3-isopropylmalate dehydrogenase | 0.50 | MPMX49_00583 | | L-threonine dehydratase biosynthetic IlvA | 0.89 | 12 |
| Pseudomonas fluorescens SBW25-INTG | 0.53 | PFLU_RS20565 | | 3-isopropylmalate dehydrogenase | 0.48 | PFLU_RS28665 | | threonine ammonia-lyase, biosynthetic | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.53 | PFLU_RS20565 | | 3-isopropylmalate dehydrogenase | 0.48 | PFLU_RS28665 | | threonine ammonia-lyase, biosynthetic | low | > 109 |
| Pseudomonas sp. SVBP6 | 0.53 | COO64_RS05650 | leuB | 3-isopropylmalate dehydrogenase | 0.51 | COO64_RS25570 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 93 |
| Pseudomonas simiae WCS417 | 0.53 | PS417_18585 | | 3-isopropylmalate dehydrogenase | 0.48 | PS417_27010 | | threonine dehydratase | 0.75 | 35 |
| Pseudomonas fluorescens FW300-N1B4 | 0.53 | Pf1N1B4_12 | | 3-isopropylmalate dehydrogenase (EC 1.1.1.85) | 0.49 | Pf1N1B4_2280 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.80 | 33 |
| Pseudomonas fluorescens FW300-N2E3 | 0.52 | AO353_20635 | | 3-isopropylmalate dehydrogenase | 0.50 | AO353_08485 | | threonine dehydratase | 0.73 | 47 |
| Pseudomonas putida KT2440 | 0.52 | PP_1988 | | 3-isopropylmalate dehydrogenase | 0.51 | PP_3446 | | threonine deaminase | low | > 96 |
| Pseudomonas lactucae CFBP13502 | 0.52 | GEMAOFIL_03945 | | 3-isopropylmalate dehydrogenase | 0.48 | GEMAOFIL_05542 | | L-threonine dehydratase biosynthetic IlvA | low | > 93 |
| Pseudomonas sp. BP01 | 0.52 | JOY50_RS16615 | leuB | 3-isopropylmalate dehydrogenase | 0.51 | JOY50_RS19700 | ilvA | threonine ammonia-lyase, biosynthetic | — | — |
| Pseudomonas aeruginosa PA14 | 0.52 | IKLFDK_15865 | | 3-isopropylmalate dehydrogenase | 0.54 | IKLFDK_06305 | | threonine ammonia-lyase biosynthetic | low | > 100 |
| Pseudomonas fluorescens FW300-N2C3 | 0.52 | AO356_21415 | | 3-isopropylmalate dehydrogenase | 0.49 | AO356_10330 | | threonine dehydratase | 0.72 | 45 |
| Pseudomonas fluorescens FW300-N2E2 | 0.52 | Pf6N2E2_66 | | 3-isopropylmalate dehydrogenase (EC 1.1.1.85) | 0.49 | Pf6N2E2_3938 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.47 | 61 |
| Pseudomonas fluorescens GW456-L13 | 0.51 | PfGW456L13_3945 | | 3-isopropylmalate dehydrogenase (EC 1.1.1.85) | 0.49 | PfGW456L13_949 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.74 | 59 |
| Pseudomonas sp. RS175 | 0.51 | PFR28_02821 | | 3-isopropylmalate dehydrogenase | 0.49 | PFR28_04834 | | L-threonine dehydratase biosynthetic IlvA | 0.45 | 32 |
| Pseudomonas stutzeri RCH2 | 0.51 | Psest_2589 | | 3-isopropylmalate dehydrogenase | 0.50 | Psest_3866 | | threonine ammonia-lyase, biosynthetic, long form | 0.94 | 5 |
| Dechlorosoma suillum PS | 0.51 | Dsui_3198 | | 3-isopropylmalate dehydrogenase | 0.50 | Dsui_0728 | | threonine ammonia-lyase, biosynthetic, long form | — | — |
| Pseudomonas sp. DMC3 | 0.51 | GFF788 | | 3-isopropylmalate dehydrogenase | 0.50 | GFF268 | | L-threonine dehydratase biosynthetic IlvA | 0.91 | 54 |
| Pseudomonas syringae pv. syringae B728a | 0.51 | Psyr_1985 | | 3-isopropylmalate dehydrogenase | 0.49 | Psyr_4846 | | L-threonine ammonia-lyase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.51 | Psyr_1985 | | 3-isopropylmalate dehydrogenase | 0.49 | Psyr_4846 | | L-threonine ammonia-lyase | low | > 86 |
| Methylophilus sp. DMC18 | 0.51 | GFF648 | | 3-isopropylmalate dehydrogenase | 0.48 | GFF2839 | | L-threonine dehydratase biosynthetic IlvA | — | — |
| Acinetobacter radioresistens SK82 | 0.50 | MPMX26_00348 | | 3-isopropylmalate dehydrogenase | 0.47 | MPMX26_01278 | | L-threonine dehydratase biosynthetic IlvA | 0.95 | 7 |
| Marinobacter adhaerens HP15 | 0.50 | HP15_1832 | | 3-isopropylmalate dehydrogenase | 0.53 | HP15_3213 | | threonine dehydratase biosynthetic | 0.95 | 3 |
| Acinetobacter baumannii LAC-4 | 0.50 | RR41_RS16885 | | 3-isopropylmalate dehydrogenase | 0.48 | RR41_RS13930 | | threonine ammonia-lyase, biosynthetic | low | > 55 |
| Variovorax sp. OAS795 | 0.50 | ABID97_RS08455 | | 3-isopropylmalate dehydrogenase | 0.49 | ABID97_RS07000 | | threonine ammonia-lyase, biosynthetic | — | — |
| Pseudomonas sp. S08-1 | 0.50 | OH686_04470 | | 3-isopropylmalate dehydrogenase | 0.51 | OH686_11400 | | threonine ammonia-lyase, biosynthetic | 0.92 | 2 |
| Acidovorax sp. GW101-3H11 | 0.50 | Ac3H11_1528 | | 3-isopropylmalate dehydrogenase (EC 1.1.1.85) | 0.50 | Ac3H11_2042 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.62 | 62 |
| Variovorax sp. SCN45 | 0.50 | GFF3888 | | 3-isopropylmalate dehydrogenase (EC 1.1.1.85) | 0.50 | GFF5246 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | low | > 127 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.49 | GFF3360 | | 3-isopropylmalate dehydrogenase (EC 1.1.1.85) | 0.51 | GFF1379 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.88 | 7 |
| Synechocystis sp000284455 PCC 6803 | 0.49 | SGL_RS09375 | | 3-isopropylmalate dehydrogenase | 0.47 | SGL_RS06140 | | threonine ammonia-lyase, biosynthetic | — | — |
| Castellaniella sp019104865 MT123 | 0.48 | ABCV34_RS04280 | | 3-isopropylmalate dehydrogenase | 0.50 | ABCV34_RS14460 | | threonine ammonia-lyase, biosynthetic | 0.94 | 6 |
| Phaeobacter inhibens DSM 17395 | 0.48 | PGA1_c29830 | | 3-isopropylmalate dehydrogenase LeuB | 0.17 | PGA1_c34900 | | threonine dehydratase biosynthetic | low | > 62 |
| Herbaspirillum seropedicae SmR1 | 0.48 | HSERO_RS16500 | | 3-isopropylmalate dehydrogenase | 0.47 | HSERO_RS19510 | | threonine dehydratase | 0.92 | 9 |
| Burkholderia phytofirmans PsJN | 0.48 | BPHYT_RS33900 | | 3-isopropylmalate dehydrogenase | 0.49 | BPHYT_RS11065 | | threonine dehydratase | — | — |
| Ralstonia solanacearum GMI1000 | 0.48 | RS_RS09990 | | 3-isopropylmalate dehydrogenase | 0.50 | RS_RS02225 | | threonine ammonia-lyase, biosynthetic | — | — |
| Paraburkholderia graminis OAS925 | 0.48 | ABIE53_004804 | | 3-isopropylmalate dehydrogenase | 0.49 | ABIE53_002293 | | threonine dehydratase | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.48 | QEN71_RS17620 | | 3-isopropylmalate dehydrogenase | 0.50 | QEN71_RS01985 | | threonine ammonia-lyase, biosynthetic | 0.83 | 6 |
| Cupriavidus basilensis FW507-4G11 | 0.47 | RR42_RS14385 | | 3-isopropylmalate dehydrogenase | 0.46 | RR42_RS02315 | | threonine dehydratase | low | > 128 |
| Ralstonia solanacearum PSI07 | 0.47 | RPSI07_RS14705 | | 3-isopropylmalate dehydrogenase | 0.50 | RPSI07_RS21810 | | threonine ammonia-lyase, biosynthetic | 0.78 | 6 |
| Ralstonia solanacearum IBSBF1503 | 0.47 | RALBFv3_RS02610 | | 3-isopropylmalate dehydrogenase | 0.48 | RALBFv3_RS11395 | | threonine ammonia-lyase, biosynthetic | 0.48 | 35 |
| Ralstonia sp. UNC404CL21Col | 0.47 | ABZR87_RS14530 | | 3-isopropylmalate dehydrogenase | 0.47 | ABZR87_RS07360 | | threonine ammonia-lyase, biosynthetic | 0.93 | 4 |
| Ralstonia solanacearum UW163 | 0.47 | UW163_RS11115 | | 3-isopropylmalate dehydrogenase | 0.48 | UW163_RS02190 | | threonine ammonia-lyase, biosynthetic | — | — |
| Azospirillum sp. SherDot2 | 0.46 | MPMX19_00607 | | 3-isopropylmalate dehydrogenase | 0.51 | MPMX19_02807 | | L-threonine dehydratase biosynthetic IlvA | low | > 112 |
| Rhodanobacter sp000427505 FW510-R12 | 0.41 | LRK53_RS03100 | | 3-isopropylmalate dehydrogenase | 0.45 | LRK53_RS03075 | | threonine ammonia-lyase, biosynthetic | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.40 | LRK55_RS09965 | | 3-isopropylmalate dehydrogenase | 0.44 | LRK55_RS09940 | | threonine ammonia-lyase, biosynthetic | low | > 63 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.40 | A4249_RS09995 | | 3-isopropylmalate dehydrogenase | 0.49 | A4249_RS00615 | | threonine ammonia-lyase, biosynthetic | 0.99 | 32 |
| Rhodanobacter denitrificans FW104-10B01 | 0.39 | LRK54_RS10325 | | 3-isopropylmalate dehydrogenase | 0.44 | LRK54_RS10300 | | threonine ammonia-lyase, biosynthetic | low | > 59 |
| Rhodanobacter sp. FW510-T8 | 0.39 | OKGIIK_13595 | leuB | 3-isopropylmalate dehydrogenase | 0.46 | OKGIIK_13620 | ilvA | threonine ammonia-lyase, biosynthetic | low | > 53 |
| Dyella japonica UNC79MFTsu3.2 | 0.37 | ABZR86_RS15950 | | 3-isopropylmalate dehydrogenase | 0.49 | ABZR86_RS15925 | | threonine ammonia-lyase, biosynthetic | low | > 74 |
Not shown: 36 genomes with orthologs for EX28DRAFT_3669 only; 0 genomes with orthologs for EX28DRAFT_4444 only