| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BL21 | 1.0 | ECD_02659 | | glycine cleavage system transcriptional activator; autorepressor | 1.0 | ECD_00414 | | multidrug efflux system | low | > 61 |
| Escherichia coli ECRC101 | 1.00 | MCAODC_10645 | gcvA | glycine cleavage system transcriptional regulator GcvA | 1.00 | MCAODC_27425 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | low | > 87 |
| Escherichia coli ECRC99 | 1.00 | KEDOAH_08010 | gcvA | glycine cleavage system transcriptional regulator GcvA | 1.00 | KEDOAH_19765 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | — | — |
| Escherichia coli ECRC102 | 1.00 | NIAGMN_17890 | gcvA | glycine cleavage system transcriptional regulator GcvA | 1.00 | NIAGMN_06255 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | — | — |
| Escherichia coli ECRC98 | 1.00 | JDDGAC_23785 | gcvA | glycine cleavage system transcriptional regulator GcvA | 1.00 | JDDGAC_11850 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | low | > 86 |
| Escherichia coli BW25113 | 1.00 | b2808 | gcvA | DNA-binding transcriptional dual regulator (NCBI) | 1.00 | b0463 | acrA | multidrug efflux system (NCBI) | low | > 76 |
| Escherichia fergusonii Becca | 1.00 | EFB2_01109 | | Glycine cleavage system transcriptional activator | 1.00 | EFB2_03595 | | Multidrug efflux pump subunit AcrA | low | > 86 |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_12000 | gcvA | glycine cleavage system transcriptional regulator GcvA | 1.00 | NOLOHH_01135 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | low | > 75 |
| Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS15650 | | glycine cleavage system transcriptional regulator GcvA | 1.00 | ECOLIN_RS02755 | | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_00923 | | Glycine cleavage system transcriptional activator | 1.00 | OHPLBJKB_03211 | | Multidrug efflux pump subunit AcrA | low | > 73 |
| Escherichia coli ECRC100 | 1.00 | OKFHMN_20120 | gcvA | glycine cleavage system transcriptional regulator GcvA | 1.00 | OKFHMN_08200 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | low | > 80 |
| Escherichia coli ECOR38 | 1.00 | HEPCGN_19375 | gcvA | glycine cleavage system transcriptional regulator GcvA | 1.00 | HEPCGN_06815 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | low | > 87 |
| Escherichia coli ECRC62 | 1.00 | BNILDI_10505 | gcvA | glycine cleavage system transcriptional regulator GcvA | 1.00 | BNILDI_22550 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | low | > 75 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.99 | GFF4865 | | Glycine cleavage system transcriptional activator GcvA | 0.82 | GFF4380 | | Membrane fusion protein of RND family multidrug efflux pump | low | > 78 |
| Enterobacter asburiae PDN3 | 0.98 | EX28DRAFT_2883 | | Transcriptional regulator | 0.82 | EX28DRAFT_2495 | | RND family efflux transporter, MFP subunit | low | > 76 |
| Enterobacter sp. TBS_079 | 0.97 | MPMX20_03671 | | Glycine cleavage system transcriptional activator | 0.85 | MPMX20_01065 | | Multidrug efflux pump subunit AcrA | low | > 85 |
| Klebsiella michiganensis M5al | 0.97 | BWI76_RS22955 | | transcriptional regulator GcvA | 0.85 | BWI76_RS06780 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | low | > 92 |
| Pantoea sp. MT58 | 0.93 | IAI47_04025 | | transcriptional regulator GcvA | 0.74 | IAI47_14510 | | efflux RND transporter periplasmic adaptor subunit | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.93 | LU632_RS06255 | | transcriptional regulator GcvA | 0.71 | LU632_RS18180 | | efflux RND transporter periplasmic adaptor subunit | — | — |
| Dickeya dadantii 3937 | 0.93 | DDA3937_RS05050 | | transcriptional regulator GcvA | 0.70 | DDA3937_RS05740 | | efflux RND transporter periplasmic adaptor subunit | low | > 74 |
| Dickeya dianthicola ME23 | 0.93 | DZA65_RS05390 | | transcriptional regulator GcvA | 0.68 | DZA65_RS06120 | | efflux RND transporter periplasmic adaptor subunit | low | > 75 |
| Dickeya dianthicola 67-19 | 0.93 | HGI48_RS05050 | | transcriptional regulator GcvA | 0.68 | HGI48_RS05795 | | efflux RND transporter periplasmic adaptor subunit | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.92 | HER17_RS16415 | | transcriptional regulator GcvA | 0.69 | HER17_RS15735 | | efflux RND transporter periplasmic adaptor subunit | low | > 75 |
| Serratia liquefaciens MT49 | 0.91 | IAI46_20340 | | transcriptional regulator GcvA | 0.75 | IAI46_05190 | | multidrug efflux RND transporter periplasmic adaptor subunit SdeX | low | > 86 |
| Rahnella sp. WP5 | 0.89 | EX31_RS13110 | | transcriptional regulator GcvA | 0.74 | EX31_RS22475 | | efflux RND transporter periplasmic adaptor subunit | low | > 89 |
| Shewanella oneidensis MR-1 | 0.70 | SO1533 | | glycine cleavage system transcriptional activator, putative (NCBI ptt file) | 0.43 | SO4693 | | multidrug resistance protein, AcrA/AcrE family (NCBI ptt file) | low | > 76 |
| Shewanella amazonensis SB2B | 0.70 | Sama_2429 | | DNA-binding transcriptional activator GcvA (RefSeq) | 0.43 | Sama_3553 | | multidrug resistance protein AcrA/AcrE family (RefSeq) | low | > 62 |
| Shewanella loihica PV-4 | 0.70 | Shew_2764 | | DNA-binding transcriptional activator GcvA (RefSeq) | 0.42 | Shew_0031 | | RND family efflux transporter MFP subunit (RefSeq) | — | — |
| Alteromonas macleodii MIT1002 | 0.61 | MIT1002_01520 | | Gcv operon activator | 0.36 | MIT1002_00134 | | Acriflavine resistance protein A precursor | 0.41 | 32 |
| Kangiella aquimarina DSM 16071 | 0.54 | B158DRAFT_0909 | | Transcriptional regulator | 0.32 | B158DRAFT_0734 | | RND family efflux transporter, MFP subunit | low | > 40 |
| Azospirillum sp. SherDot2 | 0.46 | MPMX19_01055 | | Glycine cleavage system transcriptional activator | 0.47 | MPMX19_05883 | | Multidrug resistance protein MexA | low | > 112 |
| Rhodospirillum rubrum S1H | 0.39 | Rru_A3368 | | Transcriptional Regulator, LysR family (NCBI) | 0.44 | Rru_A2050 | | Secretion protein HlyD (NCBI) | low | > 58 |
| Azospirillum brasilense Sp245 | 0.39 | AZOBR_RS20105 | | transcriptional regulator | 0.47 | AZOBR_RS30180 | | hemolysin D | low | > 97 |
| Pseudomonas fluorescens FW300-N2E2 | 0.38 | Pf6N2E2_1560 | | Glycine cleavage system transcriptional activator GcvA | 0.51 | Pf6N2E2_2823 | | Multidrug efflux RND membrane fusion protein MexC | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.38 | ABIE53_001336 | | LysR family glycine cleavage system transcriptional activator | 0.43 | ABIE53_003409 | | membrane fusion protein (multidrug efflux system) | low | > 113 |
| Caulobacter crescentus NA1000 | 0.38 | CCNA_01174 | | LysR-family transcriptional regulator | 0.41 | CCNA_00851 | | periplasmic multidrug efflux lipoprotein precursor | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.38 | CCNA_01174 | | LysR-family transcriptional regulator | 0.41 | CCNA_00851 | | periplasmic multidrug efflux lipoprotein precursor | low | > 67 |
| Ralstonia solanacearum GMI1000 | 0.36 | RS_RS13815 | | transcriptional regulator GcvA | 0.46 | RS_RS00050 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.36 | RALBFv3_RS22095 | | transcriptional regulator GcvA | 0.45 | RALBFv3_RS09450 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | low | > 76 |
| Ralstonia solanacearum UW163 | 0.36 | UW163_RS22635 | | transcriptional regulator GcvA | 0.45 | UW163_RS04130 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | — | — |
| Ralstonia sp. UNC404CL21Col | 0.36 | ABZR87_RS01495 | | transcriptional regulator GcvA | 0.44 | ABZR87_RS05310 | | efflux RND transporter periplasmic adaptor subunit | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.35 | RPSI07_RS11375 | | transcriptional regulator GcvA | 0.46 | RPSI07_RS23900 | | efflux RND transporter periplasmic adaptor subunit | low | > 81 |
| Burkholderia phytofirmans PsJN | 0.34 | BPHYT_RS11810 | | LysR family transcriptional regulator | 0.45 | BPHYT_RS34600 | | hemolysin D | low | > 109 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.34 | H281DRAFT_02051 | | LysR family transcriptional regulator, glycine cleavage system transcriptional activator | 0.46 | H281DRAFT_01000 | | membrane fusion protein, multidrug efflux system | low | > 103 |
| Paraburkholderia sabiae LMG 24235 | 0.34 | QEN71_RS01310 | | transcriptional regulator GcvA | 0.46 | QEN71_RS29870 | | efflux RND transporter periplasmic adaptor subunit | low | > 153 |
| Sphingomonas koreensis DSMZ 15582 | 0.34 | Ga0059261_4130 | | Transcriptional regulator | 0.44 | Ga0059261_0560 | | RND family efflux transporter, MFP subunit | low | > 68 |
| Rhizobium sp. OAE497 | 0.34 | ABIE40_RS01615 | | transcriptional regulator GcvA | 0.43 | ABIE40_RS24220 | | efflux RND transporter periplasmic adaptor subunit | low | > 107 |
| Cupriavidus basilensis FW507-4G11 | 0.32 | RR42_RS26815 | | LysR family transcriptional regulator | 0.44 | RR42_RS32415 | | hemolysin D | low | > 128 |
| Bosea sp. OAE506 | 0.32 | ABIE41_RS23870 | | transcriptional regulator GcvA | 0.41 | ABIE41_RS01600 | | efflux RND transporter periplasmic adaptor subunit | low | > 77 |
| Variovorax sp. SCN45 | 0.32 | GFF1355 | | Transcriptional regulator, LysR family | 0.42 | GFF5989 | | RND efflux system, membrane fusion protein | 0.42 | 30 |
| Pseudomonas fluorescens FW300-N2C3 | 0.32 | AO356_15125 | | LysR family transcriptional regulator | 0.52 | AO356_04875 | | antibiotic transporter | low | > 104 |
| Acinetobacter radioresistens SK82 | 0.31 | MPMX26_01927 | | Glycine cleavage system transcriptional activator | 0.41 | MPMX26_00690 | | Multidrug efflux pump subunit AcrA | — | — |
| Variovorax sp. OAS795 | 0.31 | ABID97_RS29015 | | transcriptional regulator GcvA | 0.39 | ABID97_RS00320 | | efflux RND transporter periplasmic adaptor subunit | low | > 91 |
| Pseudomonas putida KT2440 | 0.31 | PP_4107 | | Transcriptional regulator, LysR family | 0.49 | PP_1386 | | Probable efflux pump periplasmic linker TtgA | low | > 96 |
| Pseudomonas fluorescens FW300-N1B4 | 0.31 | Pf1N1B4_72 | | Transcriptional regulator, LysR family | 0.48 | Pf1N1B4_3247 | | Multidrug efflux RND membrane fusion protein MexC | — | — |
| Pseudomonas simiae WCS417 | 0.31 | PS417_14890 | | LysR family transcriptional regulator | 0.49 | PS417_06775 | | antibiotic transporter | low | > 88 |
| Acidovorax sp. GW101-3H11 | 0.31 | Ac3H11_902 | | Glycine cleavage system transcriptional activator | 0.35 | Ac3H11_4449 | | RND efflux system, membrane fusion protein CmeA | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.30 | PFLU_RS16910 | | LysR family transcriptional regulator | 0.49 | PFLU_RS06810 | | efflux RND transporter periplasmic adaptor subunit | low | > 109 |
| Pseudomonas fluorescens GW456-L13 | 0.30 | PfGW456L13_4953 | | Glycine cleavage system transcriptional activator | 0.48 | PfGW456L13_4580 | | Multidrug efflux RND membrane fusion protein MexC | low | > 87 |
| Pseudomonas fluorescens SBW25 | 0.30 | PFLU_RS16910 | | LysR family transcriptional regulator | 0.49 | PFLU_RS06810 | | efflux RND transporter periplasmic adaptor subunit | low | > 109 |
| Pseudomonas syringae pv. syringae B728a | 0.30 | Psyr_3521 | | transcriptional regulator, LysR family | 0.50 | Psyr_4007 | | Secretion protein HlyD | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.30 | Psyr_3521 | | transcriptional regulator, LysR family | 0.50 | Psyr_4007 | | Secretion protein HlyD | low | > 86 |
| Pseudomonas sp. S08-1 | 0.30 | OH686_20310 | | Transcriptional regulator, LysR family | 0.50 | OH686_16045 | | Multidrug efflux system, membrane fusion component | low | > 80 |
| Sinorhizobium meliloti 1021 | 0.30 | SMa0179 | | LysR family transcriptional regulator | 0.39 | SMc02868 | | multidrug efflux system protein | low | > 103 |
| Pseudomonas fluorescens FW300-N2E3 | 0.30 | AO353_15505 | | LysR family transcriptional regulator | 0.47 | AO353_17300 | | antibiotic transporter | low | > 101 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.30 | DVU1402 | | transcriptional regulator, LysR family (TIGR) | 0.45 | DVU2817 | acrA | multidrug resistance protein (TIGR) | low | > 55 |
| Pseudomonas stutzeri RCH2 | 0.29 | Psest_2739 | | Transcriptional regulator | 0.49 | Psest_0309 | | RND family efflux transporter, MFP subunit | low | > 67 |
| Pseudomonas sp. RS175 | 0.29 | PFR28_04727 | | Glycine cleavage system transcriptional activator | 0.51 | PFR28_00632 | | putative efflux pump periplasmic linker TtgA | low | > 88 |
| Rhodanobacter denitrificans FW104-10B01 | 0.29 | LRK54_RS06630 | | transcriptional regulator GcvA | 0.32 | LRK54_RS02095 | | efflux RND transporter periplasmic adaptor subunit | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.29 | LRK55_RS06375 | | transcriptional regulator GcvA | 0.32 | LRK55_RS01870 | | efflux RND transporter periplasmic adaptor subunit | low | > 63 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.28 | GFF4407 | | Glycine cleavage system transcriptional activator | 0.40 | GFF5686 | | RND efflux system, membrane fusion protein CmeA | low | > 90 |
| Castellaniella sp019104865 MT123 | 0.26 | ABCV34_RS01790 | | LysR substrate-binding domain-containing protein | 0.33 | ABCV34_RS04230 | | efflux RND transporter periplasmic adaptor subunit | low | > 48 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.25 | Xcc-8004.1418.1 | | Glycine cleavage system transcriptional activator | 0.48 | Xcc-8004.1793.1 | | RND efflux system, membrane fusion protein CmeA | — | — |
| Lysobacter sp. OAE881 | 0.24 | ABIE51_RS00605 | | LysR substrate-binding domain-containing protein | 0.30 | ABIE51_RS17985 | | efflux RND transporter periplasmic adaptor subunit | low | > 62 |
| Rhodopseudomonas palustris CGA009 | 0.22 | TX73_013680 | | LysR substrate-binding domain-containing protein | 0.41 | TX73_012250 | | efflux RND transporter periplasmic adaptor subunit | low | > 86 |
| Rhodanobacter sp. FW510-T8 | 0.20 | OKGIIK_16180 | | Biotin transporter BioY | 0.34 | OKGIIK_09165 | acrA | efflux transporter periplasmic adaptor subunit | low | > 52 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.11 | CA265_RS22285 | | LysR family transcriptional regulator | 0.21 | CA265_RS23015 | | efflux transporter periplasmic adaptor subunit | low | > 88 |