Conservation of cofitness between DZA65_RS19385 and DZA65_RS00355 in Dickeya dianthicola ME23

77 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola ME23 1.0 DZA65_RS19385 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 1.0 DZA65_RS00355 argininosuccinate synthase 0.92 4
Dickeya dianthicola 67-19 1.00 HGI48_RS18245 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 1.00 HGI48_RS00355 argininosuccinate synthase 0.63 56
Dickeya dadantii 3937 0.95 DDA3937_RS18310 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.99 DDA3937_RS20890 argininosuccinate synthase 0.75 52
Pectobacterium carotovorum WPP14 0.93 HER17_RS02895 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.92 HER17_RS21055 argininosuccinate synthase low > 75
Rahnella sp. WP5 0.91 EX31_RS03835 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.89 EX31_RS13445 argininosuccinate synthase 0.97 5
Klebsiella michiganensis M5al 0.89 BWI76_RS04465 carbamoyl-phosphate synthase small subunit 0.92 BWI76_RS25115 argininosuccinate synthase 0.54 22
Enterobacter asburiae PDN3 0.88 EX28DRAFT_3637 carbamoyl-phosphate synthase, small subunit 0.93 EX28DRAFT_3224 argininosuccinate synthase (EC 6.3.4.5) — —
Serratia liquefaciens MT49 0.88 IAI46_03190 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.15 IAI46_24505 argininosuccinate synthase 0.85 8
Escherichia coli BL21 0.88 ECD_00036 carbamoyl phosphate synthetase small subunit, glutamine amidotransferase 0.92 ECD_03038 argininosuccinate synthetase 0.73 15
Escherichia coli HS(pFamp)R (ATCC 700891) 0.88 OHPLBJKB_03625 Carbamoyl-phosphate synthase small chain 0.92 OHPLBJKB_00528 Argininosuccinate synthase low > 73
Escherichia coli BW25113 0.88 b0032 carA carbamoyl-phosphate synthase small subunit (NCBI) 0.92 b3172 argG argininosuccinate synthase (NCBI) 0.86 21
Escherichia coli ECOR27 0.88 NOLOHH_03275 carA carbamoyl phosphate synthase small subunit 0.92 NOLOHH_09890 argG argininosuccinate synthase low > 75
Escherichia coli ECRC98 0.88 JDDGAC_14540 carA carbamoyl phosphate synthase small subunit 0.92 JDDGAC_21715 argG argininosuccinate synthase 0.86 25
Escherichia coli ECRC100 0.88 OKFHMN_10945 carA carbamoyl phosphate synthase small subunit 0.92 OKFHMN_18090 argG argininosuccinate synthase low > 80
Escherichia coli ECOR38 0.88 HEPCGN_08930 carA carbamoyl phosphate synthase small subunit 0.92 HEPCGN_16965 argG argininosuccinate synthase 0.87 22
Escherichia coli ECRC99 0.88 KEDOAH_17210 carA carbamoyl phosphate synthase small subunit 0.92 KEDOAH_10060 argG argininosuccinate synthase — —
Escherichia coli ECRC102 0.88 NIAGMN_08795 carA carbamoyl phosphate synthase small subunit 0.92 NIAGMN_15850 argG argininosuccinate synthase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.88 GFF214 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.91 GFF2913 Argininosuccinate synthase (EC 6.3.4.5) low > 78
Escherichia coli ECRC62 0.88 BNILDI_08325 carA carbamoyl phosphate synthase small subunit 0.92 BNILDI_01645 argG argininosuccinate synthase 0.77 71
Escherichia coli ECRC101 0.88 MCAODC_01460 carA carbamoyl phosphate synthase small subunit 0.92 MCAODC_08610 argG argininosuccinate synthase 0.80 38
Escherichia fergusonii Becca 0.88 EFB2_04013 Carbamoyl-phosphate synthase small chain 0.92 EFB2_00651 Argininosuccinate synthase low > 86
Escherichia coli Nissle 1917 0.88 ECOLIN_RS00175 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.92 ECOLIN_RS18275 argininosuccinate synthase 0.76 31
Enterobacter sp. TBS_079 0.85 MPMX20_00739 Carbamoyl-phosphate synthase small chain 0.93 MPMX20_04077 Argininosuccinate synthase 0.89 8
Erwinia tracheiphila SCR3 0.84 LU632_RS02755 carA glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.16 LU632_RS19605 argininosuccinate synthase 0.57 65
Shewanella loihica PV-4 0.78 Shew_2839 carbamoyl phosphate synthase small subunit (RefSeq) 0.15 Shew_0205 argininosuccinate synthase (RefSeq) 0.88 34
Shewanella oneidensis MR-1 0.76 SO1141 carA carbamoyl-phosphate synthase, small subunit (NCBI ptt file) 0.14 SO0278 argG argininosuccinate synthase (NCBI ptt file) 0.88 40
Shewanella sp. ANA-3 0.74 Shewana3_0967 carbamoyl phosphate synthase small subunit (RefSeq) 0.14 Shewana3_3902 argininosuccinate synthase (RefSeq) 0.87 60
Pseudomonas fluorescens FW300-N2E3 0.71 AO353_05635 carbamoyl phosphate synthase small subunit 0.12 AO353_04105 argininosuccinate synthase — —
Pseudomonas stutzeri RCH2 0.71 Psest_0967 carbamoyl-phosphate synthase, small subunit 0.12 Psest_3121 argininosuccinate synthase — —
Pseudomonas sp. S08-1 0.71 OH686_17075 Carbamoyl-phosphate synthase small chain 0.12 OH686_03930 argininosuccinate synthase — —
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_3365 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.12 Pf6N2E2_5590 Argininosuccinate synthase (EC 6.3.4.5) — —
Pseudomonas fluorescens GW456-L13 0.71 PfGW456L13_5100 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.12 PfGW456L13_1749 Argininosuccinate synthase (EC 6.3.4.5) — —
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_1173 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.12 Pf1N1B4_742 Argininosuccinate synthase (EC 6.3.4.5) — —
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_07485 carbamoyl phosphate synthase small subunit 0.12 AO356_18325 argininosuccinate synthase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_4192 carbamoyl-phosphate synthase small subunit 0.11 Psyr_3892 argininosuccinate synthase — —
Pseudomonas putida KT2440 0.70 PP_4724 Carbamoyl-phosphate synthase small chain 0.12 PP_1088 Argininosuccinate synthase 0.51 24
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_4192 carbamoyl-phosphate synthase small subunit 0.11 Psyr_3892 argininosuccinate synthase — —
Pseudomonas simiae WCS417 0.70 PS417_24045 carbamoyl phosphate synthase small subunit 0.12 PS417_05640 argininosuccinate synthase — —
Marinobacter adhaerens HP15 0.70 HP15_3078 carbamoyl-phosphate synthase small chain 0.11 HP15_2367 argininosuccinate synthase — —
Pseudomonas sp. RS175 0.70 PFR28_00076 Carbamoyl-phosphate synthase small chain 0.12 PFR28_03353 Argininosuccinate synthase — —
Pseudomonas fluorescens SBW25-INTG 0.70 PFLU_RS25885 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.12 PFLU_RS05725 argininosuccinate synthase — —
Pseudomonas fluorescens SBW25 0.70 PFLU_RS25885 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.12 PFLU_RS05725 argininosuccinate synthase — —
Dechlorosoma suillum PS 0.68 Dsui_3065 carbamoyl-phosphate synthase, small subunit 0.13 Dsui_3248 argininosuccinate synthase — —
Acinetobacter radioresistens SK82 0.68 MPMX26_00767 Carbamoyl-phosphate synthase small chain 0.78 MPMX26_02260 Argininosuccinate synthase low > 36
Herbaspirillum seropedicae SmR1 0.65 HSERO_RS06920 carbamoyl phosphate synthase small subunit 0.77 HSERO_RS07180 argininosuccinate synthase — —
Cupriavidus basilensis FW507-4G11 0.65 RR42_RS13520 carbamoyl phosphate synthase small subunit 0.13 RR42_RS17170 argininosuccinate synthase — —
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS14150 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.77 ABZR87_RS00835 argininosuccinate synthase — —
Acidovorax sp. GW101-3H11 0.64 Ac3H11_435 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.78 Ac3H11_2616 Argininosuccinate synthase (EC 6.3.4.5) — —
Ralstonia solanacearum PSI07 0.64 RPSI07_RS15245 carbamoyl-phosphate synthase small subunit 0.76 RPSI07_RS12120 argininosuccinate synthase — —
Paraburkholderia sabiae LMG 24235 0.64 QEN71_RS04775 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.79 QEN71_RS09235 argininosuccinate synthase — —
Ralstonia solanacearum UW163 0.64 UW163_RS15510 carbamoyl-phosphate synthase small subunit 0.77 UW163_RS08445 argininosuccinate synthase — —
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS02200 carbamoyl-phosphate synthase small subunit 0.77 RALBFv3_RS05180 argininosuccinate synthase — —
Rhodanobacter sp. FW510-T8 0.64 OKGIIK_07300 carbamoyl phosphate synthase small subunit 0.08 OKGIIK_09465 argG argininosuccinate synthase low > 52
Ralstonia solanacearum GMI1000 0.63 RS_RS07620 carbamoyl-phosphate synthase small subunit 0.77 RS_RS12800 argininosuccinate synthase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.63 GFF4899 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.76 GFF294 Argininosuccinate synthase (EC 6.3.4.5) — —
Variovorax sp. SCN45 0.63 GFF377 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.77 GFF3096 Argininosuccinate synthase (EC 6.3.4.5) — —
Variovorax sp. OAS795 0.63 ABID97_RS17090 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.76 ABID97_RS21670 argininosuccinate synthase — —
Castellaniella sp019104865 MT123 0.59 ABCV34_RS15505 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.79 ABCV34_RS05390 argininosuccinate synthase — —
Azospirillum brasilense Sp245 0.51 AZOBR_RS10920 carbamoyl phosphate synthase small subunit 0.14 AZOBR_RS00785 argininosuccinate synthase — —
Azospirillum sp. SherDot2 0.51 MPMX19_00757 Carbamoyl-phosphate synthase small chain 0.13 MPMX19_02369 Argininosuccinate synthase — —
Magnetospirillum magneticum AMB-1 0.51 AMB_RS03600 carbamoyl-phosphate synthase small subunit 0.13 AMB_RS05720 argininosuccinate synthase — —
Rhodospirillum rubrum S1H 0.48 Rru_A2885 Carbamoyl-phosphate synthase, small subunit (NCBI) 0.15 Rru_A3751 Argininosuccinate synthase (NCBI) 0.91 4
Rhodopseudomonas palustris CGA009 0.48 TX73_006555 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.77 TX73_002040 argininosuccinate synthase — —
Phaeobacter inhibens DSM 17395 0.48 PGA1_c06670 carbamoyl-phosphate synthase small chain 0.14 PGA1_c34920 argininosuccinate synthase ArgG — —
Sphingomonas koreensis DSMZ 15582 0.47 Ga0059261_4243 carbamoyl-phosphate synthase, small subunit 0.15 Ga0059261_1393 argininosuccinate synthase (EC 6.3.4.5) — —
Sinorhizobium meliloti 1021 0.47 SMc01569 carbamoyl phosphate synthase small subunit 0.14 SMc03826 argininosuccinate synthase 0.87 2
Brevundimonas sp. GW460-12-10-14-LB2 0.47 A4249_RS16140 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.13 A4249_RS14275 argininosuccinate synthase — —
Dinoroseobacter shibae DFL-12 0.47 Dshi_2387 carbamoyl-phosphate synthase, small subunit (RefSeq) 0.14 Dshi_3472 Argininosuccinate synthase (RefSeq) — —
Bosea sp. OAE506 0.47 ABIE41_RS11975 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.12 ABIE41_RS00340 argininosuccinate synthase — —
Rhizobium sp. OAE497 0.45 ABIE40_RS12765 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.14 ABIE40_RS18150 argininosuccinate synthase — —
Agrobacterium fabrum C58 0.45 Atu2170 carbamoylphosphate synthase small chain 0.14 Atu2667 argininosuccinate synthase — —
Caulobacter crescentus NA1000 Δfur 0.45 CCNA_02925 carbamoyl-phosphate synthase small chain 0.14 CCNA_00128 argininosuccinate synthase low > 67
Caulobacter crescentus NA1000 0.45 CCNA_02925 carbamoyl-phosphate synthase small chain 0.14 CCNA_00128 argininosuccinate synthase — —
Synechococcus elongatus PCC 7942 0.45 Synpcc7942_2122 carA carbamoyl phosphate synthase small subunit 0.14 Synpcc7942_0009 argG argininosuccinate synthase — —
Desulfovibrio vulgaris Hildenborough JW710 0.39 DVU3113 carA carbamoyl-phosphate synthase, small subunit (TIGR) 0.17 DVU1095 argG argininosuccinate synthase (TIGR) — —
Methanococcus maripaludis JJ 0.37 MMJJ_RS06195 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.12 MMJJ_RS05060 argininosuccinate synthase — —
Desulfovibrio vulgaris Miyazaki F 0.37 DvMF_2370 carbamoyl phosphate synthase small subunit (RefSeq) 0.16 DvMF_0047 argininosuccinate synthase (RefSeq) 0.68 29
Methanococcus maripaludis S2 0.37 MMP_RS08170 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.13 MMP_RS00425 argininosuccinate synthase — —

Not shown: 26 genomes with orthologs for DZA65_RS19385 only; 0 genomes with orthologs for DZA65_RS00355 only