Conservation of cofitness between CSW01_03400 and CSW01_19140 in Vibrio cholerae E7946 ATCC 55056

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03400 tRNA pseudouridine(55) synthase TruB 1.0 CSW01_19140 organic hydroperoxide resistance protein 0.53 5
Serratia liquefaciens MT49 0.72 IAI46_01945 tRNA pseudouridine(55) synthase TruB 0.41 IAI46_00425 organic hydroperoxide resistance protein low > 86
Dickeya dadantii 3937 0.71 DDA3937_RS03080 tRNA pseudouridine(55) synthase TruB 0.36 DDA3937_RS14535 organic hydroperoxide resistance protein low > 74
Dickeya dianthicola 67-19 0.70 HGI48_RS03250 tRNA pseudouridine(55) synthase TruB 0.35 HGI48_RS18740 organic hydroperoxide resistance protein — —
Dickeya dianthicola ME23 0.69 DZA65_RS03245 tRNA pseudouridine(55) synthase TruB 0.36 DZA65_RS19875 organic hydroperoxide resistance protein low > 75
Pectobacterium carotovorum WPP14 0.68 HER17_RS18200 tRNA pseudouridine(55) synthase TruB 0.36 HER17_RS06405 organic hydroperoxide resistance protein low > 75
Pantoea agglomerans CFBP13505 P0401 0.68 PagCFBP13505_RS09110 tRNA pseudouridine(55) synthase TruB 0.40 PagCFBP13505_RS15705 organic hydroperoxide resistance protein low > 74
Pantoea sp. MT58 0.67 IAI47_17015 tRNA pseudouridine(55) synthase TruB 0.41 IAI47_18670 organic hydroperoxide resistance protein low > 76
Erwinia amylovora T8 0.67 OLJFJH_07250 tRNA pseudouridine(55) synthase TruB 0.40 OLJFJH_04895 organic hydroperoxide resistance protein low > 58
Enterobacter asburiae PDN3 0.66 EX28DRAFT_3217 tRNA pseudouridine(55) synthase 0.40 EX28DRAFT_3563 peroxiredoxin, Ohr subfamily low > 76
Enterobacter sp. TBS_079 0.66 MPMX20_04071 tRNA pseudouridine synthase B 0.41 MPMX20_00653 Organic hydroperoxide resistance protein OhrB low > 85
Erwinia tracheiphila SCR3 0.66 LU632_RS21050 truB tRNA pseudouridine(55) synthase TruB 0.42 LU632_RS00240 organic hydroperoxide resistance protein low > 74
Erwinia tracheiphila HP pepo 2.2 0.65 IJEDHG_13945 truB tRNA pseudouridine(55) synthase TruB 0.42 IJEDHG_10060 osmC Organic hydroperoxide resistance protein low > 61
Rahnella sp. WP5 0.65 EX31_RS08530 tRNA pseudouridine(55) synthase TruB 0.41 EX31_RS05590 organic hydroperoxide resistance protein low > 89
Shewanella sp. ANA-3 0.64 Shewana3_1032 tRNA pseudouridine synthase B (RefSeq) 0.64 Shewana3_3312 OsmC family protein (RefSeq) low > 73
Shewanella loihica PV-4 0.64 Shew_2825 tRNA pseudouridine synthase B (RefSeq) 0.67 Shew_1244 OsmC family protein (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.50 MIT1002_01773 tRNA pseudouridine synthase B 0.45 MIT1002_00889 General stress protein 17o low > 70
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_4178 tRNA pseudouridine synthase B 0.44 Psyr_3627 OsmC-like protein low > 86
Pseudomonas stutzeri RCH2 0.46 Psest_0983 tRNA pseudouridine 55 synthase 0.37 Psest_4102 peroxiredoxin, Ohr subfamily — —
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_4178 tRNA pseudouridine synthase B 0.44 Psyr_3627 OsmC-like protein low > 86
Pseudomonas putida KT2440 0.46 PP_4710 tRNA pseudouridine 55 synthase 0.40 PP_1859 Organic hydroperoxide resistance protein — —
Marinobacter adhaerens HP15 0.46 HP15_3065 tRNA pseudouridine synthase B 0.41 HP15_2791 peroxiredoxin, organic hydroperoxide resistance-related protein low > 73
Pseudomonas sp. BP01 0.46 JOY50_RS26845 truB tRNA pseudouridine(55) synthase TruB 0.41 JOY50_RS17045 organic hydroperoxide resistance protein low > 84
Pseudomonas sp. DMC3 0.46 GFF4990 tRNA pseudouridine synthase B 0.43 GFF4611 Organic hydroperoxide resistance protein OhrB low > 89
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_5086 tRNA pseudouridine synthase B (EC 4.2.1.70) 0.43 PfGW456L13_2236 Organic hydroperoxide resistance protein — —
Pseudomonas fluorescens FW300-N2E3 0.45 AO353_05550 pseudouridine synthase 0.43 AO353_19085 organic hydroperoxide resistance protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_1159 tRNA pseudouridine synthase B (EC 4.2.1.70) 0.42 Pf1N1B4_276 Organic hydroperoxide resistance protein low > 87
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_3351 tRNA pseudouridine synthase B (EC 4.2.1.70) 0.42 Pf6N2E2_2459 Organic hydroperoxide resistance protein low > 103
Pseudomonas sp. RS175 0.45 PFR28_00092 tRNA pseudouridine synthase B 0.43 PFR28_00972 Organic hydroperoxide resistance protein OhrB — —
Pseudomonas sp. S08-1 0.44 OH686_17155 tRNA pseudouridine(55) synthase 0.38 OH686_17655 Organic hydroperoxide resistance protein low > 80
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_07400 pseudouridine synthase 0.42 AO356_03150 organic hydroperoxide resistance protein — —
Pseudomonas segetis P6 0.44 MPMX49_01203 tRNA pseudouridine synthase B 0.36 MPMX49_01719 Organic hydroperoxide resistance protein OhrB low > 75
Pseudomonas sp. SVBP6 0.44 COO64_RS15160 truB tRNA pseudouridine(55) synthase TruB 0.42 COO64_RS06050 organic hydroperoxide resistance protein low > 93
Pseudomonas simiae WCS417 0.44 PS417_23960 pseudouridine synthase 0.43 PS417_08490 organic hydroperoxide resistance protein — —
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS25800 tRNA pseudouridine(55) synthase TruB 0.43 PFLU_RS08440 organic hydroperoxide resistance protein — —
Pseudomonas fluorescens SBW25 0.44 PFLU_RS25800 tRNA pseudouridine(55) synthase TruB 0.43 PFLU_RS08440 organic hydroperoxide resistance protein — —
Pseudomonas lactucae CFBP13502 0.44 GEMAOFIL_04943 tRNA pseudouridine synthase B 0.44 GEMAOFIL_01830 Organic hydroperoxide resistance protein OhrB low > 93
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS17985 tRNA pseudouridine synthase B 0.38 HSERO_RS15360 regulator of disulfide bond formation redox protein low > 78
Pseudomonas aeruginosa PA14 0.43 IKLFDK_29890 tRNA pseudouridine(55) synthase TruB 0.39 IKLFDK_14475 organic hydroperoxide resistance protein OhrR low > 100
Dechlorosoma suillum PS 0.42 Dsui_2720 tRNA pseudouridine 55 synthase 0.38 Dsui_2173 peroxiredoxin, Ohr subfamily — —
Ralstonia solanacearum GMI1000 0.41 RS_RS06470 tRNA pseudouridine(55) synthase TruB 0.39 RS_RS22460 organic hydroperoxide resistance protein low > 80
Paraburkholderia graminis OAS925 0.40 ABIE53_001832 tRNA pseudouridine55 synthase 0.35 ABIE53_001847 osmotically inducible protein OsmC low > 113
Cupriavidus basilensis FW507-4G11 0.40 RR42_RS12835 tRNA pseudouridine synthase B 0.39 RR42_RS22590 organic hydroperoxide resistance protein low > 128
Acinetobacter baumannii LAC-4 0.40 RR41_RS01740 tRNA pseudouridine(55) synthase TruB 0.41 RR41_RS15890 organic hydroperoxide resistance protein low > 55
Ralstonia solanacearum UW163 0.40 UW163_RS13150 tRNA pseudouridine(55) synthase TruB 0.38 UW163_RS20720 organic hydroperoxide resistance protein — —
Ralstonia solanacearum PSI07 0.40 RPSI07_RS17665 tRNA pseudouridine(55) synthase TruB 0.38 RPSI07_RS05145 organic hydroperoxide resistance protein low > 81
Ralstonia solanacearum IBSBF1503 0.40 RALBFv3_RS15690 tRNA pseudouridine(55) synthase TruB 0.38 RALBFv3_RS18410 organic hydroperoxide resistance protein — —
Burkholderia phytofirmans PsJN 0.40 BPHYT_RS08080 tRNA pseudouridine synthase B 0.46 BPHYT_RS33660 OsmC family protein — —
Paraburkholderia sabiae LMG 24235 0.40 QEN71_RS23090 tRNA pseudouridine(55) synthase TruB 0.45 QEN71_RS17835 organic hydroperoxide resistance protein — —
Paraburkholderia bryophila 376MFSha3.1 0.40 H281DRAFT_05106 tRNA pseudouridine synthase B 0.45 H281DRAFT_06032 peroxiredoxin, Ohr subfamily low > 103
Ralstonia sp. UNC404CL21Col 0.39 ABZR87_RS11220 tRNA pseudouridine(55) synthase TruB 0.51 ABZR87_RS22145 organic hydroperoxide resistance protein low > 80
Acinetobacter radioresistens SK82 0.38 MPMX26_02778 tRNA pseudouridine synthase B 0.41 MPMX26_00579 Organic hydroperoxide resistance protein OhrB low > 36
Variovorax sp. OAS795 0.37 ABID97_RS16475 tRNA pseudouridine(55) synthase TruB 0.36 ABID97_RS00930 organic hydroperoxide resistance protein low > 91
Variovorax sp. SCN45 0.36 GFF220 tRNA pseudouridine(55) synthase (EC 5.4.99.25) 0.35 GFF3569 Organic hydroperoxide resistance protein low > 127
Xanthobacter sp. DMC5 0.36 GFF2293 tRNA pseudouridine synthase B 0.42 GFF4448 Organic hydroperoxide resistance protein OhrB — —
Lysobacter sp. OAE881 0.36 ABIE51_RS08405 tRNA pseudouridine(55) synthase TruB 0.41 ABIE51_RS14310 organic hydroperoxide resistance protein low > 62
Rhodanobacter denitrificans MT42 0.35 LRK55_RS00810 tRNA pseudouridine(55) synthase TruB 0.39 LRK55_RS15480 organic hydroperoxide resistance protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.35 LRK54_RS01035 tRNA pseudouridine(55) synthase TruB 0.39 LRK54_RS15730 organic hydroperoxide resistance protein low > 59
Xanthomonas campestris pv. campestris strain 8004 0.34 Xcc-8004.2004.1 tRNA pseudouridine synthase B (EC 4.2.1.70) 0.39 Xcc-8004.340.1 Organic hydroperoxide resistance protein low > 74
Rhodopseudomonas palustris CGA009 0.33 TX73_002255 tRNA pseudouridine(55) synthase TruB 0.49 TX73_021240 organic hydroperoxide resistance protein low > 86
Azospirillum sp. SherDot2 0.33 MPMX19_02524 tRNA pseudouridine synthase B 0.42 MPMX19_00747 Organic hydroperoxide resistance protein OhrB low > 112
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS06015 tRNA pseudouridine(55) synthase TruB 0.48 ABZR86_RS08955 organic hydroperoxide resistance protein low > 74
Caulobacter crescentus NA1000 Δfur 0.31 CCNA_00035 tRNA pseudouridine synthase B 0.41 CCNA_00963 organic hydroperoxide resistance protein low > 67
Caulobacter crescentus NA1000 0.31 CCNA_00035 tRNA pseudouridine synthase B 0.41 CCNA_00963 organic hydroperoxide resistance protein low > 66
Bosea sp. OAE506 0.30 ABIE41_RS04565 tRNA pseudouridine(55) synthase TruB 0.34 ABIE41_RS12545 organic hydroperoxide resistance protein low > 77
Magnetospirillum magneticum AMB-1 0.29 AMB_RS20810 tRNA pseudouridine(55) synthase TruB 0.41 AMB_RS16680 organic hydroperoxide resistance protein low > 64
Agrobacterium fabrum C58 0.29 Atu0085 tRNA pseudouridine 55 synthase 0.43 Atu0847 organic hydroperoxide resistance protein low > 89
Phaeobacter inhibens DSM 17395 0.29 PGA1_c32950 tRNA pseudouridine synthase B 0.42 PGA1_c34100 organic hydroperoxide resistance protein Ohr low > 62
Sinorhizobium meliloti 1021 0.28 SMc00321 tRNA pseudouridine synthase B 0.41 SMc00040 hypothetical protein low > 103
Rhizobium sp. OAE497 0.28 ABIE40_RS00345 tRNA pseudouridine(55) synthase TruB 0.42 ABIE40_RS21990 organic hydroperoxide resistance protein low > 107
Sphingomonas koreensis DSMZ 15582 0.25 Ga0059261_2142 tRNA pseudouridine(55) synthase 0.41 Ga0059261_0853 peroxiredoxin, Ohr subfamily low > 68
Sphingobium sp. HT1-2 0.24 GFF2345 tRNA pseudouridine(55) synthase (EC 5.4.99.25) 0.42 GFF2220 Organic hydroperoxide resistance protein low > 95

Not shown: 26 genomes with orthologs for CSW01_03400 only; 11 genomes with orthologs for CSW01_19140 only