Conservation of cofitness between CSW01_15330 and CSW01_18760 in Vibrio cholerae E7946 ATCC 55056

84 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_15330 glycine dehydrogenase (decarboxylating) 1.0 CSW01_18760 dihydroorotase 0.73 9
Alteromonas macleodii MIT1002 0.63 MIT1002_02971 Glycine dehydrogenase [decarboxylating] 0.61 MIT1002_03750 Dihydroorotase — —
Pseudomonas sp. S08-1 0.60 OH686_11165 glycine dehydrogenase 0.66 OH686_03940 dihydroorotase, homodimeric type — —
Dechlorosoma suillum PS 0.60 Dsui_2737 glycine dehydrogenase, decarboxylating 0.60 Dsui_0250 dihydroorotase, homodimeric type — —
Pseudomonas stutzeri RCH2 0.60 Psest_0183 glycine dehydrogenase (decarboxylating) 0.66 Psest_3123 dihydroorotase, homodimeric type low > 67
Klebsiella pneumoniae MKP103 0.59 KDGMDA_04370 aminomethyl-transferring glycine dehydrogenase 0.56 KDGMDA_18610 dihydroorotase low > 95
Pseudomonas segetis P6 0.59 MPMX49_04479 Glycine dehydrogenase (decarboxylating) 0.67 MPMX49_01445 Dihydroorotase — —
Enterobacter asburiae PDN3 0.59 EX28DRAFT_2955 glycine dehydrogenase (decarboxylating) 0.57 EX28DRAFT_1869 dihydroorotase (EC 3.5.2.3) — —
Pantoea sp. MT58 0.59 IAI47_03775 aminomethyl-transferring glycine dehydrogenase 0.54 IAI47_12215 dihydroorotase low > 76
Klebsiella michiganensis M5al 0.59 BWI76_RS23870 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) 0.55 BWI76_RS10990 dihydroorotase low > 92
Pantoea agglomerans CFBP13505 P0401 0.59 PagCFBP13505_RS15925 aminomethyl-transferring glycine dehydrogenase 0.55 PagCFBP13505_RS05115 dihydroorotase low > 74
Kangiella aquimarina DSM 16071 0.59 B158DRAFT_0545 glycine dehydrogenase (decarboxylating) 0.67 B158DRAFT_1241 dihydroorotase (EC 3.5.2.3) — —
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_2236 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.67 Pf1N1B4_744 Dihydroorotase (EC 3.5.2.3) — —
Enterobacter sp. TBS_079 0.59 MPMX20_03762 Glycine dehydrogenase (decarboxylating) 0.57 MPMX20_01741 Dihydroorotase low > 85
Pseudomonas sp. BP01 0.59 JOY50_RS22405 gcvP aminomethyl-transferring glycine dehydrogenase 0.66 JOY50_RS14925 pyrC dihydroorotase — —
Escherichia coli ECOR27 0.59 NOLOHH_11445 gcvP aminomethyl-transferring glycine dehydrogenase 0.55 NOLOHH_21260 pyrC dihydroorotase low > 76
Escherichia coli Nissle 1917 0.59 ECOLIN_RS16165 aminomethyl-transferring glycine dehydrogenase 0.55 ECOLIN_RS06160 dihydroorotase low > 55
Escherichia coli ECOR38 0.59 HEPCGN_18820 gcvP aminomethyl-transferring glycine dehydrogenase 0.55 HEPCGN_23760 pyrC dihydroorotase low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.59 OHPLBJKB_00812 Glycine dehydrogenase (decarboxylating) 0.55 OHPLBJKB_02603 Dihydroorotase low > 74
Escherichia coli ECRC99 0.59 KEDOAH_08610 gcvP aminomethyl-transferring glycine dehydrogenase 0.55 KEDOAH_24025 pyrC dihydroorotase — —
Escherichia coli ECRC98 0.59 JDDGAC_23170 gcvP aminomethyl-transferring glycine dehydrogenase 0.55 JDDGAC_07390 pyrC dihydroorotase low > 87
Escherichia coli ECRC100 0.59 OKFHMN_19530 gcvP aminomethyl-transferring glycine dehydrogenase 0.55 OKFHMN_03730 pyrC dihydroorotase low > 79
Escherichia coli ECRC101 0.59 MCAODC_10050 gcvP aminomethyl-transferring glycine dehydrogenase 0.55 MCAODC_23090 pyrC dihydroorotase low > 87
Escherichia coli ECRC102 0.59 NIAGMN_17295 gcvP aminomethyl-transferring glycine dehydrogenase 0.55 NIAGMN_24100 pyrC dihydroorotase low > 80
Escherichia coli BW25113 0.59 b2903 gcvP glycine dehydrogenase (NCBI) 0.55 b1062 pyrC dihydroorotase (NCBI) low > 76
Escherichia fergusonii Becca 0.59 EFB2_00999 Glycine dehydrogenase (decarboxylating) 0.55 EFB2_02912 Dihydroorotase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF3003 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.53 GFF3342 Dihydroorotase (EC 3.5.2.3) low > 78
Escherichia coli ECRC62 0.59 BNILDI_09980 gcvP aminomethyl-transferring glycine dehydrogenase 0.55 BNILDI_19420 pyrC dihydroorotase low > 75
Escherichia coli BL21 0.59 ECD_02735 glycine decarboxylase, PLP-dependent, subunit P of glycine cleavage complex 0.55 ECD_01058 dihydro-orotase 0.50 5
Erwinia amylovora T8 0.59 OLJFJH_08785 aminomethyl-transferring glycine dehydrogenase 0.56 OLJFJH_15670 dihydroorotase 0.58 25
Shewanella loihica PV-4 0.59 Shew_3062 glycine dehydrogenase (RefSeq) 0.74 Shew_0728 dihydroorotase (RefSeq) low > 60
Shewanella sp. ANA-3 0.58 Shewana3_3499 glycine dehydrogenase (RefSeq) 0.77 Shewana3_3263 dihydroorotase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.58 SO0781 gcvP glycine cleavage system P protein (NCBI ptt file) 0.75 SO3695 pyrC dihydroorotase, homodimeric type (NCBI ptt file) low > 76
Pseudomonas putida KT2440 0.58 PP_5192 glycine dehydrogenase 0.66 PP_1086 dihydroorotase — —
Pseudomonas sp. DMC3 0.58 GFF308 Glycine dehydrogenase (decarboxylating) 0.67 GFF5094 Dihydroorotase — —
Pseudomonas fluorescens FW300-N2E3 0.58 AO353_08720 glycine dehydrogenase 0.67 AO353_04115 dihydroorotase — —
Pseudomonas sp. SVBP6 0.58 COO64_RS00950 gcvP aminomethyl-transferring glycine dehydrogenase 0.67 COO64_RS16860 pyrC dihydroorotase — —
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_904 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.67 PfGW456L13_1747 Dihydroorotase (EC 3.5.2.3) — —
Paraburkholderia bryophila 376MFSha3.1 0.58 H281DRAFT_02409 glycine dehydrogenase 0.61 H281DRAFT_04265 dihydroorotase — —
Serratia liquefaciens MT49 0.58 IAI46_20850 aminomethyl-transferring glycine dehydrogenase 0.57 IAI46_09740 dihydroorotase low > 87
Dickeya dianthicola ME23 0.58 DZA65_RS03445 aminomethyl-transferring glycine dehydrogenase 0.55 DZA65_RS13710 dihydroorotase low > 75
Dickeya dadantii 3937 0.58 DDA3937_RS03255 aminomethyl-transferring glycine dehydrogenase 0.56 DDA3937_RS13170 dihydroorotase low > 74
Dickeya dianthicola 67-19 0.58 HGI48_RS03400 aminomethyl-transferring glycine dehydrogenase 0.55 HGI48_RS13235 dihydroorotase low > 71
Paraburkholderia graminis OAS925 0.58 ABIE53_000238 glycine dehydrogenase 0.62 ABIE53_003505 dihydroorotase — —
Shewanella amazonensis SB2B 0.58 Sama_2719 glycine dehydrogenase (RefSeq) 0.77 Sama_2870 dihydroorotase (RefSeq) low > 62
Burkholderia phytofirmans PsJN 0.58 BPHYT_RS19330 glycine cleavage system P protein (EC 1.4.4.2) (from data) 0.61 BPHYT_RS16675 dihydroorotase low > 109
Pectobacterium carotovorum WPP14 0.58 HER17_RS17995 aminomethyl-transferring glycine dehydrogenase 0.56 HER17_RS08600 dihydroorotase low > 75
Rahnella sp. WP5 0.58 EX31_RS21520 aminomethyl-transferring glycine dehydrogenase 0.55 EX31_RS24385 dihydroorotase low > 89
Erwinia tracheiphila SCR3 0.58 LU632_RS05915 gcvP aminomethyl-transferring glycine dehydrogenase 0.57 LU632_RS10340 pyrC dihydroorotase low > 73
Erwinia tracheiphila HP pepo 2.2 0.58 IJEDHG_03250 gcvP aminomethyl-transferring glycine dehydrogenase 0.57 IJEDHG_20990 pyrC dihydroorotase low > 61
Pseudomonas aeruginosa PA14 0.57 IKLFDK_27405 aminomethyl-transferring glycine dehydrogenase 0.66 IKLFDK_18005 dihydroorotase — —
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS24000 aminomethyl-transferring glycine dehydrogenase 0.66 PFLU_RS05715 dihydroorotase — —
Pseudomonas fluorescens SBW25 0.57 PFLU_RS24000 aminomethyl-transferring glycine dehydrogenase 0.66 PFLU_RS05715 dihydroorotase — —
Pseudomonas aeruginosa PUPa3 0.57 DQ20_RS50180 gcvP;go_function=glycine aminomethyl-transferring glycine dehydrogenase 0.66 DQ20_RS41770 pyrC;go_function=dihydroorotase dihydroorotase — —
Pseudomonas aeruginosa MRSN321 0.57 DY961_RS11935 gcvP;go_function=glycine aminomethyl-transferring glycine dehydrogenase 0.66 DY961_RS15380 pyrC;go_function=dihydroorotase dihydroorotase — —
Ralstonia solanacearum UW163 0.57 UW163_RS04950 glycine dehydrogenase (aminomethyl-transferring) 0.64 UW163_RS01995 dihydroorotase — —
Ralstonia solanacearum IBSBF1503 0.57 RALBFv3_RS08660 glycine dehydrogenase (aminomethyl-transferring) 0.64 RALBFv3_RS11590 dihydroorotase — —
Ralstonia solanacearum PSI07 0.57 RPSI07_RS08575 glycine dehydrogenase (aminomethyl-transferring) 0.64 RPSI07_RS21625 dihydroorotase — —
Paraburkholderia sabiae LMG 24235 0.57 QEN71_RS29215 aminomethyl-transferring glycine dehydrogenase 0.61 QEN71_RS26855 dihydroorotase low > 153
Pseudomonas orientalis W4I3 0.57 QF045_RS24485 aminomethyl-transferring glycine dehydrogenase 0.66 QF045_RS08555 dihydroorotase — —
Pseudomonas lactucae CFBP13502 0.57 GEMAOFIL_04608 Glycine dehydrogenase (decarboxylating) 0.66 GEMAOFIL_01313 Dihydroorotase — —
Pseudomonas simiae WCS417 0.57 PS417_22360 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) 0.66 PS417_05630 dihydroorotase — —
Rhodanobacter denitrificans MT42 0.56 LRK55_RS00260 aminomethyl-transferring glycine dehydrogenase 0.57 LRK55_RS10600 dihydroorotase low > 63
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS03935 aminomethyl-transferring glycine dehydrogenase 0.65 ABZR87_RS07550 dihydroorotase — —
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_18170 glycine dehydrogenase 0.66 AO356_18315 dihydroorotase — —
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_5558 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) 0.66 Pf6N2E2_5588 Dihydroorotase (EC 3.5.2.3) — —
Pseudomonas sp. RS175 0.56 PFR28_03383 Glycine dehydrogenase (decarboxylating) 0.67 PFR28_03355 Dihydroorotase — —
Variovorax sp. SCN45 0.56 GFF6478 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.59 GFF4557 Dihydroorotase (EC 3.5.2.3) low > 127
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS20070 glycine dehydrogenase 0.62 RR42_RS02610 dihydroorotase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_1096 glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit 0.67 Psyr_3894 dihydroorotase — —
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_1096 glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit 0.67 Psyr_3894 dihydroorotase — —
Ralstonia solanacearum GMI1000 0.56 RS_RS16510 glycine dehydrogenase 0.65 RS_RS02420 dihydroorotase — —
Rhodanobacter denitrificans FW104-10B01 0.56 LRK54_RS00520 aminomethyl-transferring glycine dehydrogenase 0.59 LRK54_RS10900 dihydroorotase — —
Phaeobacter inhibens DSM 17395 0.56 PGA1_78p00310 glycine dehydrogenase 0.52 PGA1_c10910 dihydroorotase PyrC — —
Variovorax sp. OAS795 0.56 ABID97_RS19655 aminomethyl-transferring glycine dehydrogenase 0.59 ABID97_RS06040 dihydroorotase — —
Dinoroseobacter shibae DFL-12 0.55 Dshi_2680 glycine dehydrogenase (RefSeq) 0.51 Dshi_2371 dihydroorotase, homodimeric type (RefSeq) low > 64
Rhodanobacter sp. FW510-T8 0.55 OKGIIK_06740 gcvP2 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain 0.57 OKGIIK_12970 pyrC dihydroorotase — —
Sinorhizobium meliloti 1021 0.55 SMc02049 glycine dehydrogenase 0.53 SMc02166 dihydroorotase low > 103
Synechocystis sp000284455 PCC 6803 0.55 SGL_RS11955 aminomethyl-transferring glycine dehydrogenase 0.57 SGL_RS12080 dihydroorotase — —
Agrobacterium fabrum C58 0.54 Atu1462 glycine cleavage system protein P2 0.53 Atu0399 dihydroorotase 0.70 47
Castellaniella sp019104865 MT123 0.54 ABCV34_RS08835 aminomethyl-transferring glycine dehydrogenase 0.57 ABCV34_RS09730 dihydroorotase — —
Rhizobium sp. OAE497 0.54 ABIE40_RS09950 aminomethyl-transferring glycine dehydrogenase 0.52 ABIE40_RS02105 dihydroorotase — —
Rhodanobacter sp000427505 FW510-R12 0.54 LRK53_RS09610 aminomethyl-transferring glycine dehydrogenase 0.59 LRK53_RS03690 dihydroorotase low > 59
Hydrogenophaga sp. GW460-11-11-14-LB1 0.54 GFF5215 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.61 GFF523 Dihydroorotase (EC 3.5.2.3) low > 90
Acidovorax sp. GW101-3H11 0.54 Ac3H11_167 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.62 Ac3H11_1963 Dihydroorotase (EC 3.5.2.3) — —

Not shown: 17 genomes with orthologs for CSW01_15330 only; 7 genomes with orthologs for CSW01_18760 only