Conservation of cofitness between CSW01_03755 and CSW01_11560 in Vibrio cholerae E7946 ATCC 55056

81 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03755 recombination-associated protein RdgC 1.0 CSW01_11560 riboflavin biosynthesis protein RibD 0.79 12
Dickeya dianthicola 67-19 0.59 HGI48_RS05465 recombination-associated protein RdgC 0.50 HGI48_RS05565 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Dickeya dianthicola ME23 0.59 DZA65_RS05790 recombination-associated protein RdgC 0.50 DZA65_RS05890 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Dickeya dadantii 3937 0.58 DDA3937_RS05405 recombination-associated protein RdgC 0.50 DDA3937_RS05505 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Erwinia amylovora T8 0.58 OLJFJH_18235 recombination-associated protein RdgC 0.54 OLJFJH_18090 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Rahnella sp. WP5 0.58 EX31_RS21990 recombination-associated protein RdgC 0.53 EX31_RS22125 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Pantoea sp. MT58 0.58 IAI47_14910 recombination-associated protein RdgC 0.53 IAI47_14770 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Klebsiella pneumoniae MKP103 0.58 KDGMDA_14285 recombination-associated protein RdgC 0.53 KDGMDA_14440 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Serratia liquefaciens MT49 0.58 IAI46_04710 recombination-associated protein RdgC 0.53 IAI46_04895 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Klebsiella michiganensis M5al 0.57 BWI76_RS06205 recombination-associated protein RdgC 0.52 BWI76_RS06350 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase — —
Pantoea agglomerans CFBP13505 P0401 0.57 PagCFBP13505_RS10255 recombination-associated protein RdgC 0.54 PagCFBP13505_RS10425 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Escherichia coli BW25113 0.57 b0393 rdgC recombination associated protein (NCBI) 0.53 b0414 ribD fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase (NCBI) — —
Escherichia coli ECOR27 0.57 NOLOHH_01500 rdgC recombination-associated protein RdgC 0.53 NOLOHH_01400 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Escherichia fergusonii Becca 0.57 EFB2_03663 Recombination-associated protein RdgC 0.51 EFB2_03643 Riboflavin biosynthesis protein RibD — —
Erwinia tracheiphila HP pepo 2.2 0.57 IJEDHG_26160 rdgC recombination-associated protein RdgC 0.51 IJEDHG_25995 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Escherichia coli BL21 0.57 ECD_00342 nucleoid-associated ssDNA and dsDNA binding protein; competitive inhibitor of RecA function 0.53 ECD_00362 fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_03282 Recombination-associated protein RdgC 0.53 OHPLBJKB_03262 Riboflavin biosynthesis protein RibD — —
Escherichia coli ECOR38 0.57 HEPCGN_07210 rdgC recombination-associated protein RdgC 0.52 HEPCGN_07080 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Escherichia coli ECRC62 0.57 BNILDI_22915 rdgC recombination-associated protein RdgC 0.53 BNILDI_22815 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Escherichia coli Nissle 1917 0.57 ECOLIN_RS02385 recombination-associated protein RdgC 0.51 ECOLIN_RS02505 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF4290 DNA recombination-dependent growth factor C 0.48 GFF4318 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) — —
Erwinia tracheiphila SCR3 0.57 LU632_RS18955 rdgC recombination-associated protein RdgC 0.51 LU632_RS18595 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Escherichia coli ECRC98 0.57 JDDGAC_12225 rdgC recombination-associated protein RdgC 0.51 JDDGAC_12110 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Escherichia coli ECRC101 0.57 MCAODC_27795 rdgC recombination-associated protein RdgC 0.51 MCAODC_27680 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Escherichia coli ECRC99 0.57 KEDOAH_19395 rdgC recombination-associated protein RdgC 0.51 KEDOAH_19510 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Escherichia coli ECRC100 0.57 OKFHMN_08570 rdgC recombination-associated protein RdgC 0.51 OKFHMN_08455 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Escherichia coli ECRC102 0.57 NIAGMN_06625 rdgC recombination-associated protein RdgC 0.51 NIAGMN_06510 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Enterobacter asburiae PDN3 0.56 EX28DRAFT_2579 DNA recombination-dependent growth factor C 0.53 EX28DRAFT_2556 diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) — —
Enterobacter sp. TBS_079 0.56 MPMX20_00982 Recombination-associated protein RdgC 0.51 MPMX20_01006 Riboflavin biosynthesis protein RibD — —
Pectobacterium carotovorum WPP14 0.55 HER17_RS16060 recombination-associated protein RdgC 0.55 HER17_RS15960 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Shewanella amazonensis SB2B 0.49 Sama_1072 rdgC recombination associated protein (RefSeq) 0.48 Sama_1016 diaminohydroxyphosphoribosylaminopyrimidine deaminase., 5-amino-6-(5-phosphoribosylamino)uracil reductase (RefSeq) — —
Shewanella sp. ANA-3 0.49 Shewana3_2881 rdgC recombination associated protein (RefSeq) 0.50 Shewana3_1096 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase (RefSeq) — —
Shewanella oneidensis MR-1 0.49 SO1556 conserved hypothetical protein (NCBI ptt file) 0.50 SO3469 ribD riboflavin biosynthesis protein RibD (NCBI ptt file) — —
Shewanella loihica PV-4 0.48 Shew_2751 rdgC recombination associated protein (RefSeq) 0.52 Shew_1187 riboflavin biosynthesis protein RibD (RefSeq) — —
Pseudomonas aeruginosa PUPa3 0.44 DQ20_RS40455 rdgC;inference=COORDINATES recombination-associated protein RdgC 0.47 DQ20_RS47900 ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Pseudomonas aeruginosa MRSN321 0.44 DY961_RS00580 rdgC;inference=COORDINATES recombination-associated protein RdgC 0.47 DY961_RS27745 ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Pseudomonas aeruginosa PA14 0.44 IKLFDK_16705 recombination-associated protein RdgC 0.47 IKLFDK_20910 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Pseudomonas putida KT2440 0.43 PP_1702 Recombination-associated protein RdgC 0.46 PP_0514 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase — —
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_1588 Putative exonuclease, RdgC 0.46 Psyr_4462 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase — —
Pseudomonas sp. BP01 0.43 JOY50_RS28065 rdgC recombination-associated protein RdgC 0.46 JOY50_RS20125 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_1588 Putative exonuclease, RdgC 0.46 Psyr_4462 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase — —
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_19265 recombination-associated protein RdgC 0.48 AO356_14930 diaminohydroxyphosphoribosylaminopyrimidine deaminase — —
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_5768 DNA recombination-dependent growth factor C 0.48 Pf6N2E2_4919 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) — —
Pseudomonas sp. S08-1 0.42 OH686_19640 DNA recombination-dependent growth factor RdgC 0.46 OH686_15695 riboflavin biosynthesis protein RibD — —
Pseudomonas sp. RS175 0.42 PFR28_03182 Recombination-associated protein RdgC 0.48 PFR28_03949 Riboflavin biosynthesis protein RibD — —
Pseudomonas sp. SVBP6 0.42 COO64_RS07115 rdgC recombination-associated protein RdgC 0.47 COO64_RS15890 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_02515 recombination-associated protein RdgC 0.48 AO353_06715 diaminohydroxyphosphoribosylaminopyrimidine deaminase — —
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_3731 DNA recombination-dependent growth factor C 0.47 Pf1N1B4_2649 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) — —
Pseudomonas segetis P6 0.41 MPMX49_01735 Recombination-associated protein RdgC 0.47 MPMX49_00990 Riboflavin biosynthesis protein RibD — —
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_4216 DNA recombination-dependent growth factor C 0.47 PfGW456L13_1313 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) — —
Pseudomonas sp. DMC3 0.41 GFF2574 Recombination-associated protein RdgC 0.47 GFF3827 Riboflavin biosynthesis protein RibD — —
Pseudomonas fluorescens SBW25 0.40 PFLU_RS09255 recombination-associated protein RdgC 0.47 PFLU_RS26900 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS09255 recombination-associated protein RdgC 0.47 PFLU_RS26900 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Marinobacter adhaerens HP15 0.40 HP15_1221 recombination-associated protein rdgC 0.45 HP15_492 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase — —
Pseudomonas orientalis W4I3 0.40 QF045_RS11910 recombination-associated protein RdgC 0.46 QF045_RS27230 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Pseudomonas lactucae CFBP13502 0.40 GEMAOFIL_01972 Recombination-associated protein RdgC 0.47 GEMAOFIL_05158 Riboflavin biosynthesis protein RibD — —
Pseudomonas simiae WCS417 0.40 PS417_09245 recombinase RdgC 0.44 PS417_25265 diaminohydroxyphosphoribosylaminopyrimidine deaminase — —
Pseudomonas stutzeri RCH2 0.40 Psest_1532 DNA recombination-dependent growth factor C 0.47 Psest_3552 riboflavin biosynthesis protein RibD — —
Alteromonas macleodii MIT1002 0.37 MIT1002_00749 Recombination-associated protein RdgC 0.44 MIT1002_02700 Riboflavin biosynthesis protein RibD — —
Herbaspirillum seropedicae SmR1 0.34 HSERO_RS21640 recombinase RdgC 0.39 HSERO_RS18235 diaminohydroxyphosphoribosylaminopyrimidine deaminase — —
Castellaniella sp019104865 MT123 0.33 ABCV34_RS04480 recombination-associated protein RdgC 0.30 ABCV34_RS10545 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Lysobacter sp. OAE881 0.31 ABIE51_RS01300 recombination-associated protein RdgC 0.45 ABIE51_RS04630 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Dechlorosoma suillum PS 0.31 Dsui_2147 DNA recombination-dependent growth factor C 0.37 Dsui_1267 riboflavin biosynthesis protein RibD — —
Dyella japonica UNC79MFTsu3.2 0.31 ABZR86_RS16505 recombination-associated protein RdgC 0.40 ABZR86_RS10705 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Ralstonia solanacearum UW163 0.30 UW163_RS01150 recombination-associated protein RdgC 0.42 UW163_RS00740 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Ralstonia solanacearum IBSBF1503 0.30 RALBFv3_RS12420 recombination-associated protein RdgC 0.42 RALBFv3_RS12825 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS10690 recombination-associated protein RdgC 0.41 LRK54_RS04610 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Rhodanobacter denitrificans MT42 0.30 LRK55_RS10330 recombination-associated protein RdgC 0.41 LRK55_RS04385 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Rhodanobacter sp000427505 FW510-R12 0.30 LRK53_RS03480 recombination-associated protein RdgC 0.41 LRK53_RS05400 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS18475 recombination-associated protein RdgC 0.43 ABZR87_RS08885 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.5210.1 DNA recombination-dependent growth factor C 0.43 Xcc-8004.4395.1 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) — —
Paraburkholderia sabiae LMG 24235 0.29 QEN71_RS20685 recombination-associated protein RdgC 0.42 QEN71_RS03300 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Rhodanobacter sp. FW510-T8 0.29 OKGIIK_13190 rdgC recombination-associated protein RdgC 0.41 OKGIIK_11430 ribD bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Paraburkholderia graminis OAS925 0.29 ABIE53_001446 recombination associated protein RdgC 0.40 ABIE53_003242 diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase — —
Paraburkholderia bryophila 376MFSha3.1 0.29 H281DRAFT_00319 recombination associated protein RdgC 0.40 H281DRAFT_04019 diaminohydroxyphosphoribosylaminopyrimidine deaminase — —
Ralstonia solanacearum GMI1000 0.29 RS_RS03100 recombination-associated protein RdgC 0.42 RS_RS03600 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Kangiella aquimarina DSM 16071 0.29 B158DRAFT_1192 DNA recombination-dependent growth factor C 0.43 B158DRAFT_1910 diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) — —
Burkholderia phytofirmans PsJN 0.29 BPHYT_RS06215 recombinase RdgC 0.40 BPHYT_RS15380 diaminohydroxyphosphoribosylaminopyrimidine deaminase — —
Cupriavidus basilensis FW507-4G11 0.28 RR42_RS17820 recombinase RdgC 0.41 RR42_RS15555 diaminohydroxyphosphoribosylaminopyrimidine deaminase — —
Ralstonia solanacearum PSI07 0.28 RPSI07_RS20910 recombination-associated protein RdgC 0.42 RPSI07_RS20395 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.27 GFF5355 DNA recombination-dependent growth factor C 0.31 GFF5160 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) — —
Variovorax sp. SCN45 0.24 GFF5080 DNA recombination-dependent growth factor RdgC 0.35 GFF568 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) — —

Not shown: 0 genomes with orthologs for CSW01_03755 only; 35 genomes with orthologs for CSW01_11560 only