Conservation of cofitness between CSW01_12725 and CSW01_08685 in Vibrio cholerae E7946 ATCC 55056

79 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12725 aspartate carbamoyltransferase 1.0 CSW01_08685 glycogen synthase 0.80 6
Serratia liquefaciens MT49 0.76 IAI46_02275 aspartate carbamoyltransferase 0.23 IAI46_23925 glycogen synthase GlgA low > 86
Klebsiella michiganensis M5al 0.76 BWI76_RS02995 aspartate carbamoyltransferase 0.26 BWI76_RS26200 starch synthase low > 92
Klebsiella pneumoniae MKP103 0.76 KDGMDA_11465 aspartate carbamoyltransferase 0.26 KDGMDA_07085 glycogen synthase GlgA low > 95
Escherichia coli ECOR27 0.76 NOLOHH_04125 pyrB aspartate carbamoyltransferase 0.26 NOLOHH_08690 glgA glycogen synthase GlgA low > 76
Escherichia coli ECRC99 0.75 KEDOAH_16290 pyrB aspartate carbamoyltransferase 0.26 KEDOAH_11240 glgA glycogen synthase GlgA
Escherichia fergusonii Becca 0.75 EFB2_04288 Aspartate carbamoyltransferase catalytic subunit 0.26 EFB2_00390 Glycogen synthase low > 86
Escherichia coli BW25113 0.75 b4245 pyrB aspartate carbamoyltransferase catalytic subunit (NCBI) 0.26 b3429 glgA glycogen synthase (NCBI) low > 76
Escherichia coli ECOR38 0.75 HEPCGN_10060 pyrB aspartate carbamoyltransferase 0.26 HEPCGN_15715 glgA glycogen synthase GlgA low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_03789 Aspartate carbamoyltransferase catalytic subunit 0.26 OHPLBJKB_00272 Glycogen synthase low > 74
Escherichia coli ECRC102 0.75 NIAGMN_09715 pyrB aspartate carbamoyltransferase 0.26 NIAGMN_14670 glgA glycogen synthase GlgA low > 80
Escherichia coli ECRC101 0.75 MCAODC_02370 pyrB aspartate carbamoyltransferase 0.26 MCAODC_07430 glgA glycogen synthase GlgA low > 88
Escherichia coli BL21 0.75 ECD_04113 aspartate carbamoyltransferase, catalytic subunit 0.26 ECD_03281 glycogen synthase low > 61
Escherichia coli Nissle 1917 0.75 ECOLIN_RS24625 aspartate carbamoyltransferase 0.26 ECOLIN_RS19625 glycogen synthase GlgA low > 55
Escherichia coli ECRC98 0.75 JDDGAC_15505 pyrB aspartate carbamoyltransferase 0.26 JDDGAC_20530 glgA glycogen synthase GlgA low > 87
Escherichia coli ECRC100 0.75 OKFHMN_11865 pyrB aspartate carbamoyltransferase 0.26 OKFHMN_16900 glgA glycogen synthase GlgA low > 79
Escherichia coli ECRC62 0.75 BNILDI_07385 pyrB aspartate carbamoyltransferase 0.26 BNILDI_02825 glgA glycogen synthase GlgA low > 75
Dickeya dianthicola ME23 0.75 DZA65_RS01970 aspartate carbamoyltransferase 0.24 DZA65_RS20915 glycogen synthase GlgA low > 75
Erwinia amylovora T8 0.75 OLJFJH_07330 aspartate carbamoyltransferase 0.25 OLJFJH_04245 glycogen synthase GlgA low > 58
Dickeya dadantii 3937 0.75 DDA3937_RS01925 aspartate carbamoyltransferase 0.24 DDA3937_RS19730 glycogen synthase GlgA low > 74
Dickeya dianthicola 67-19 0.75 HGI48_RS01900 aspartate carbamoyltransferase 0.24 HGI48_RS19840 glycogen synthase GlgA low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF930 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.25 GFF578 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) low > 78
Pantoea agglomerans CFBP13505 P0401 0.75 PagCFBP13505_RS08955 aspartate carbamoyltransferase 0.27 PagCFBP13505_RS18210 glycogen synthase GlgA low > 74
Enterobacter asburiae PDN3 0.74 EX28DRAFT_3446 aspartate carbamoyltransferase (EC 2.1.3.2) 0.26 EX28DRAFT_4118 glycogen/starch synthase, ADP-glucose type
Pantoea sp. MT58 0.74 IAI47_16860 aspartate carbamoyltransferase 0.27 IAI47_01695 glycogen synthase GlgA low > 76
Enterobacter sp. TBS_079 0.74 MPMX20_00544 Aspartate carbamoyltransferase catalytic subunit 0.26 MPMX20_04311 Glycogen synthase low > 85
Rahnella sp. WP5 0.74 EX31_RS12785 aspartate carbamoyltransferase 0.26 EX31_RS05010 glycogen synthase GlgA low > 89
Pectobacterium carotovorum WPP14 0.73 HER17_RS19510 aspartate carbamoyltransferase 0.24 HER17_RS01500 glycogen synthase GlgA low > 75
Methanococcus maripaludis JJ 0.44 MMJJ_RS05825 aspartate carbamoyltransferase 0.11 MMJJ_RS07685 glycogen/starch synthase
Methanococcus maripaludis S2 0.44 MMP_RS08545 aspartate carbamoyltransferase 0.11 MMP_RS06665 glycogen/starch synthase
Shewanella oneidensis MR-1 0.34 SO1301 pyrB aspartate carbamoyltransferase (NCBI ptt file) 0.14 SO1499 glgA glycogen synthase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.34 Shewana3_3070 aspartate carbamoyltransferase (RefSeq) 0.15 Shewana3_2930 starch synthase catalytic subunit (RefSeq) low > 73
Shewanella loihica PV-4 0.33 Shew_1013 aspartate carbamoyltransferase (RefSeq) 0.14 Shew_1172 starch synthase (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.33 MIT1002_00423 Aspartate carbamoyltransferase catalytic chain 0.45 MIT1002_00235 Glycogen synthase low > 70
Shewanella amazonensis SB2B 0.33 Sama_0840 aspartate carbamoyltransferase (RefSeq) 0.15 Sama_2449 starch synthase (RefSeq) low > 62
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.1722.1 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.23 Xcc-8004.537.1 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)
Pseudomonas sp. RS175 0.25 PFR28_04237 Aspartate carbamoyltransferase 0.22 PFR28_02145 Glycogen synthase
Pseudomonas fluorescens FW300-N2E3 0.25 AO353_08135 aspartate carbamoyltransferase catalytic subunit 0.21 AO353_23775 glycogen synthase
Pseudomonas fluorescens FW300-N1B4 0.25 Pf1N1B4_2347 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.22 Pf1N1B4_4687 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)
Pseudomonas sp. DMC3 0.25 GFF204 Aspartate carbamoyltransferase 0.22 GFF3482 Glycogen synthase
Pseudomonas fluorescens GW456-L13 0.25 PfGW456L13_1016 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.22 PfGW456L13_3245 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)
Pseudomonas fluorescens FW300-N2C3 0.25 AO356_13450 aspartate carbamoyltransferase catalytic subunit 0.22 AO356_26025 glycogen synthase
Pseudomonas fluorescens FW300-N2E2 0.25 Pf6N2E2_4606 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.22 Pf6N2E2_1078 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)
Pseudomonas stutzeri RCH2 0.24 Psest_0291 aspartate carbamoyltransferase 0.22 Psest_2172 glycogen/starch synthases, ADP-glucose type
Pseudomonas simiae WCS417 0.24 PS417_26700 aspartate carbamoyltransferase catalytic subunit 0.21 PS417_14480 glycogen synthase
Pseudomonas sp. SVBP6 0.24 COO64_RS13575 aspartate carbamoyltransferase catalytic subunit 0.23 COO64_RS24815 glgA glycogen synthase GlgA low > 93
Cellulophaga baltica 18 0.24 M666_RS11460 aspartate carbamoyltransferase catalytic subunit 0.15 M666_RS00870 glycogen/starch synthase low > 67
Pseudomonas lactucae CFBP13502 0.24 GEMAOFIL_05477 Aspartate carbamoyltransferase 0.21 GEMAOFIL_03185 Glycogen synthase
Marinobacter adhaerens HP15 0.24 HP15_3507 aspartate carbamoyltransferase 0.28 HP15_1713 glycogen/starch synthase, ADP-glucose type low > 73
Pseudomonas fluorescens SBW25-INTG 0.24 PFLU_RS28345 aspartate carbamoyltransferase 0.21 PFLU_RS16410 glycogen synthase GlgA
Pseudomonas fluorescens SBW25 0.24 PFLU_RS28345 aspartate carbamoyltransferase 0.21 PFLU_RS16410 glycogen synthase GlgA
Pseudomonas putida KT2440 0.24 PP_4998 Aspartate carbamoyltransferase 0.22 PP_4050 glycogen synthase
Pedobacter sp. GW460-11-11-14-LB5 0.24 CA265_RS14660 aspartate carbamoyltransferase 0.24 CA265_RS04140 glycogen synthase
Pseudomonas sp. BP01 0.24 JOY50_RS09700 aspartate carbamoyltransferase catalytic subunit 0.22 JOY50_RS06710 glgA glycogen synthase GlgA low > 84
Fusobacterium nucleatum SB010 0.23 HUW76_08765 aspartate carbamoyltransferase catalytic subunit 0.25 HUW76_05855 glycogen synthase low > 35
Pseudomonas syringae pv. syringae B728a ΔmexB 0.23 Psyr_0482 aspartate carbamoyltransferase 0.22 Psyr_2992 Starch (bacterial glycogen) synthase
Pseudomonas syringae pv. syringae B728a 0.23 Psyr_0482 aspartate carbamoyltransferase 0.22 Psyr_2992 Starch (bacterial glycogen) synthase
Mucilaginibacter yixingensis YX-36 DSM 26809 0.23 ABZR88_RS03460 aspartate carbamoyltransferase catalytic subunit 0.23 ABZR88_RS18980 glycogen synthase
Magnetospirillum magneticum AMB-1 0.23 AMB_RS18300 aspartate carbamoyltransferase 0.25 AMB_RS10650 glycogen synthase
Pseudomonas sp. S08-1 0.23 OH686_10940 aspartate carbamoyltransferase 0.23 OH686_01280 Glycogen synthase, ADP-glucose transglucosylase
Methylophilus sp. DMC18 0.23 GFF868 Aspartate carbamoyltransferase 0.27 GFF1174 Glycogen synthase
Pseudomonas aeruginosa PA14 0.23 IKLFDK_23410 aspartate carbamoyltransferase catalytic subunit 0.22 IKLFDK_10595 glycogen synthase GlgA low > 100
Ralstonia solanacearum UW163 0.22 UW163_RS00940 aspartate carbamoyltransferase catalytic subunit 0.24 UW163_RS22835 glycogen synthase GlgA
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS08625 aspartate carbamoyltransferase catalytic subunit 0.25 ABZR87_RS17230 glycogen synthase GlgA low > 80
Ralstonia solanacearum IBSBF1503 0.22 RALBFv3_RS12625 aspartate carbamoyltransferase catalytic subunit 0.24 RALBFv3_RS22290 glycogen synthase GlgA
Ralstonia solanacearum PSI07 0.22 RPSI07_RS20635 aspartate carbamoyltransferase catalytic subunit 0.24 RPSI07_RS00900 glycogen synthase GlgA
Azospirillum brasilense Sp245 0.22 AZOBR_RS20575 aspartate carbamoyltransferase 0.27 AZOBR_RS00855 glycogen synthase
Ralstonia solanacearum GMI1000 0.22 RS_RS03410 aspartate carbamoyltransferase 0.24 RS_RS18320 glycogen synthase
Herbaspirillum seropedicae SmR1 0.22 HSERO_RS02330 aspartate carbamoyltransferase 0.22 HSERO_RS12515 glycogen synthase low > 78
Rhodospirillum rubrum S1H 0.22 Rru_A3190 Aspartate carbamoyltransferase (NCBI) 0.29 Rru_A2245 Glycogen/starch synthases, ADP-glucose type (NCBI)
Azospirillum sp. SherDot2 0.22 MPMX19_01054 Aspartate carbamoyltransferase 0.26 MPMX19_02225 Glycogen synthase
Synechococcus elongatus PCC 7942 0.21 Synpcc7942_0670 pyrB aspartate carbamoyltransferase catalytic subunit 0.23 Synpcc7942_2518 glgA glycogen synthase
Sphingobium sp. HT1-2 0.21 GFF1872 Aspartate carbamoyltransferase (EC 2.1.3.2) 0.23 GFF2034 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)
Sinorhizobium meliloti 1021 0.21 SMc01360 aspartate carbamoyltransferase catalytic subunit 0.25 SMc03924 glycogen synthase low > 103
Synechocystis sp000284455 PCC 6803 0.21 SGL_RS10555 aspartate carbamoyltransferase 0.23 SGL_RS12525 glycogen synthase GlgA
Bosea sp. OAE506 0.20 ABIE41_RS17230 aspartate carbamoyltransferase catalytic subunit 0.20 ABIE41_RS13060 glycogen synthase GlgA low > 77
Desulfovibrio vulgaris Hildenborough JW710 0.20 DVU2901 pyrB aspartate carbamoyltransferase (TIGR) 0.31 DVU2244 glgA glycogen synthase (TIGR)
Agrobacterium fabrum C58 0.20 Atu1308 aspartate carbamoyl transferase catalytic subunit 0.26 Atu5285 glycogen synthase
Rhodopseudomonas palustris CGA009 0.19 TX73_016120 aspartate carbamoyltransferase catalytic subunit 0.24 TX73_001985 glycogen synthase GlgA
Desulfovibrio vulgaris Miyazaki F 0.19 DvMF_1425 pyrB aspartate carbamoyltransferase catalytic subunit (RefSeq) 0.30 DvMF_0841 glycogen/starch synthase, ADP-glucose type (RefSeq) low > 51

Not shown: 29 genomes with orthologs for CSW01_12725 only; 6 genomes with orthologs for CSW01_08685 only